Pedobacter mucosus: LOK61_07570
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Entry
LOK61_07570 CDS
T08291
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pmuo
Pedobacter mucosus
Pathway
pmuo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmuo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LOK61_07570 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmuo03019
]
LOK61_07570 (pnp)
03016 Transfer RNA biogenesis [BR:
pmuo03016
]
LOK61_07570 (pnp)
Enzymes [BR:
pmuo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
LOK61_07570 (pnp)
Messenger RNA biogenesis [BR:
pmuo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LOK61_07570 (pnp)
Transfer RNA biogenesis [BR:
pmuo03016
]
Prokaryotic type
tRNA degradation factors
LOK61_07570 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
KH_1
PNPase
KH-I_KHDC4-BBP
S1_RRP5
HutF_N
Motif
Other DBs
NCBI-ProteinID:
UKT65640
LinkDB
All DBs
Position
complement(1838516..1840651)
Genome browser
AA seq
711 aa
AA seq
DB search
MNVIKKSFDLGDGRIVEIETGKLAKQADGSVVVKMGDTMLLATVVSTVGAKPGTDFLPLS
VDYQEKYAATGRIPGGFLRREARLSDYEVLISRLVDRALRPMFPSDYHSDTQVMISLISA
DKDIMPDCLAGLAASAALSVSDIPFNGPISEVRVAKIDGKLVINPLASQLERATLEFMVA
GSANDIGMVEGECDEIQEDEMVEALKFAHAAIKVQCAIQVELTEATGKTVKREYNHEDHD
ADLRAQVFADTYDKVYAIAKAGGNKDVRKEGFTAIINDFFAAMPEDTADLTKAMAKHYYH
DVQYDAIRNLLLDEGIRLDGRKTTEIRPIWSEVGYLPAAHGSAVFTRGETQSLTSVTLGS
KDDEQMIDGAFFNGYNKFLLHYNFPGFSTGEVRPNRGAGRREIGHGALAQRSLKKILPQG
DANPYTIRIVSDILESNGSSSMATVCAGTLALMDAGIKIKAPVSGIAMGLITDEKTGKYA
ILSDILGDEDHLGDMDFKVTGTANGIVACQMDLKINGLSYEVLTKALLQAKEGRLHILGE
MAKTLSQSNEDYKPHAPRIVSLTIEKEFIGAIIGPGGKIIQEMQRETGASISIEEVDGKG
IVEIFADNKAAIDAAVTRIRNIVAKPEIGEVYQGKVKSIMPFGAFVEVMPGKDGLLHISE
ISWERLETMDGVLKEGDKIEVKLLDIDKQGKMKLSRKVLLPRPEKPATPQA
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtaataaaaaaatcgttcgatttgggcgatggcagaattgtagaaattgaaact
ggtaaattagctaaacaagctgatggttcggttgtagtaaaaatgggagataccatgttg
ttagcaactgttgtatcaaccgttggcgctaaaccaggaactgattttttaccattatca
gttgattaccaagaaaaatatgcggctactggtcgtattccaggtggctttttacgtcgt
gaggcaagattatcagattacgaggttttaatttctcgtttggttgatagagctttacgc
ccaatgttcccaagtgattatcactctgatacgcaggtgatgatttcattaatatctgct
gataaagatattatgccagattgtttggcaggtttagcggcatctgctgcattatcagtt
tctgatattccttttaacggtcctatttctgaagtacgtgttgcaaaaattgatggcaaa
ctggtaatcaatccattggctagtcagttggagcgtgcaactttagagtttatggttgct
ggttcagctaacgatatcggcatggttgaaggtgaatgtgatgaaattcaggaagatgaa
atggttgaagctttaaaatttgcacacgctgcaattaaagttcaatgtgctattcaggtt
gaattaactgaagctacaggcaaaactgtaaaacgcgaatataatcacgaagatcatgat
gctgatttaagagctcaggtttttgctgatacttatgataaagtttatgcgattgcaaaa
gctggtggtaataaagatgttcgtaaagaaggttttaccgcaattatcaatgatttcttt
gctgcaatgccagaagatactgcagatttaacgaaggcaatggctaaacattattaccat
gatgttcagtatgatgcaatcagaaatctattattagatgaaggtattcgtttagatggt
cgtaagactactgaaattcgcccaatttggagtgaagttggttatttacctgctgctcac
ggttcggctgtgtttacacgtggcgaaactcaatcattaacgtcagttactttaggtagt
aaagatgatgagcaaatgattgatggcgctttcttcaatggttacaataaattcttattg
cactataatttccctggtttttcaactggagaggttagaccaaatagaggtgcgggtcgt
cgtgaaattggtcacggtgctttagcgcaacgttcattgaaaaaaatattaccacaaggt
gatgcaaatccatataccatccgtatcgtttctgatattttagaatctaacggttcatca
tcaatggctactgtttgtgcgggtacattagcacttatggatgcaggtattaaaatcaaa
gcgccagtttctggtattgcaatgggtttaattactgatgagaaaactggtaaatatgca
atattatctgatattttaggtgatgaagatcatttaggtgatatggatttcaaggtaact
ggtactgcaaatggtattgttgcttgtcaaatggacttaaaaatcaatggcttatcatat
gaagttttaacaaaagctttattgcaagctaaagaaggccgtttgcacattttaggtgag
atggctaaaactttgagccaatctaatgaagattataaaccacatgctccacgtattgtt
tctttaactattgagaaagaatttataggcgcaattatcggcccaggcggtaaaattatt
caagaaatgcaacgcgaaactggcgcatcaatttctattgaagaagtagacggtaagggt
atcgtagaaattttcgcagataataaagcagctattgatgcagcagttactcgtattcgt
aacatcgtagctaaaccagaaattggtgaggtttaccaaggtaaagtaaaatcaattatg
ccatttggtgcatttgttgaagttatgccaggtaaagatggtttgttacacatttctgaa
atttcatgggaacgtttagaaactatggatggtgtattgaaggaaggtgataaaatcgag
gttaaattgttagacatcgataaacaaggtaaaatgaaactttctcgtaaagttttattg
ccaagaccagaaaaaccagctacaccacaagcttaa
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