KEGG   Pedobacter mucosus: LOK61_08030
Entry
LOK61_08030       CDS       T08291                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
pmuo  Pedobacter mucosus
Brite
KEGG Orthology (KO) [BR:pmuo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pmuo03400]
    LOK61_08030
Enzymes [BR:pmuo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     LOK61_08030
    5.6.2.6  RNA 3'-5' helicase
     LOK61_08030
DNA repair and recombination proteins [BR:pmuo03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    LOK61_08030
SSDB
Motif
Pfam: WH_Lhr DEAD_assoc DEAD Helicase_C ResIII KRIT1_FRMD8_FERM_C DUF1192
Other DBs
NCBI-ProteinID: UKT65729
LinkDB
Position
1947290..1949770
AA seq 826 aa
MDQTKTKGYKKIKQWLKANGRKPFKFQEDAWQYYLNGYSGLVNAPTGFGKTFSLFLAVAI
EALNASEINNKKAKDRLQLIWITPLRSLAKDIGRAMGETLLELELDWHVGVRNGDTSQAE
KAQQKKSMPEILLITPESLHLLLAQKGSSTLFKNLKCIVADEWHELLGSKRGVLVELAVS
RIKGLQKLEKNQFLRVWGISATIGNIDQALDVLEPNLSANRIIIKADLEKKIIIKSILPD
DIETLPWAGHLGLKLAYKLLPIIEKSKTTLIFINTRGQSEMWYQHLLNIEPELAGRIAIH
HGSIDFELRNWIEDALHTGQLKAVIATSSLDLGVDFKPVDTVVQVGSPKGVARFLQRAGR
SGHSPNETSKIYFLPTHALELVEAAAIKEAAKMNNIESREPFIMVFDTLIQYLVTLAIGD
GFNDKIIYEEIKNTHAFNLILPEEWTWVMQFITSGGDSLSAYNEFKKVTKDDEDGPWKVK
SRQLAMRHRLHIGTIVSDAMLKVKFLSGGYIGMVEEYFVTRLKAGDNFRLAGRVLEFIQV
KEMTVVVRVSKQKNAISPSWNGGRLPLSSNLGSVLRKKYNEALDQNHQDEELDSVYPLFL
LQEKRSHVPRNDELLIELINTKEGFHLFAYPFEGRLVHEVLAALVAYRLSKLLPISFSIA
MNDYGFELLSETEIPMDESIAYEVFSPKNLTEDITLSINSTEMARRKFRDIACISGLVFQ
GYPGKYVANKHLQSSAGLFFNVFSDYDKHNLLLRQAYDEVFYQQLEEPRLAAALDRIQNG
AIIITNPVSFTPLSFPIKVDSMRENMSSEELEQRIARMKAESEKFN
NT seq 2481 nt   +upstreamnt  +downstreamnt
atggatcaaacgaaaaccaaaggctataaaaaaattaagcaatggcttaaagccaatggt
cgcaagccatttaagttccaggaagatgcctggcaatactatttgaacggttacagtgga
cttgtaaatgcacctactggttttggaaaaacgttttcattgttcctagcggtagcaatt
gaggcattaaatgcatcagaaataaataataaaaaagctaaagaccgtttacaattaatc
tggataacaccgctgcgatcactagccaaagatatcggtagagccatgggagaaacattg
ctggagcttgaattagattggcatgttggcgttcgcaatggcgatacttctcaggcagaa
aaagctcagcaaaagaagtcgatgcctgagattttgctaattacacctgaaagtttacac
cttttattagctcagaaaggttcttcaaccctgtttaagaatttaaaatgcattgttgct
gatgaatggcatgaacttttaggcagcaaacgcggcgtattagtagaacttgcagtttcc
aggattaaaggtttacaaaaattagagaaaaatcaatttcttcgggtttggggaatttca
gcaactatcggaaatatagaccaggctttagatgttttggagccaaatttatcagcaaat
agaattattataaaagctgatttagagaaaaaaataattatcaaatccatccttccagat
gatattgaaacgcttccttgggcagggcatttaggtttaaaattggcttataaactgcta
ccaataatcgaaaaaagtaaaacaactttaatctttattaatacccgcggtcaatcggaa
atgtggtatcagcatttgctgaatatagaaccagaactggcgggtagaattgctattcac
catggctctatagattttgagctaagaaattggatcgaagatgctttgcacacaggccaa
ttaaaagccgttattgccacttcatctttagatttaggcgtagattttaaacctgtagat
accgttgtacaggttggatcaccgaaaggcgttgccaggtttttgcagcgtgctggccgc
tcaggtcactctcctaatgaaacttcaaaaatatattttttgcctactcacgcattagaa
ttagtggaggctgcagccattaaagaagctgcaaaaatgaacaatattgaaagtagagaa
ccttttattatggttttcgataccttaattcagtacttagttacgcttgctattggcgat
ggtttcaatgataaaattatatatgaagaaattaaaaatacccatgcttttaaccttatt
ctccctgaagaatggacttgggtaatgcaatttatcacttcaggtggagatagcctgagc
gcttataatgaatttaaaaaagtaaccaaagatgatgaagatggcccttggaaagtaaaa
agtagacagctcgccatgcgtcatcgtttgcatattggtaccattgtaagtgatgcaatg
ctaaaagttaagtttctttctggtggttacatcggtatggtggaagagtattttgtaaca
cgattaaaagctggagacaatttcagattggcaggtcgcgttttggaatttattcaagta
aaagaaatgacggttgtggtgcgggtaagcaaacaaaagaatgcgatttcgccaagctgg
aacggtggaagattgcccttgtcgtcaaatttaggctccgttttgcgaaaaaaatataac
gaggctttggatcagaatcatcaggatgaagaactagattccgtttatcccctattttta
ttacaagaaaagcgatctcacgtacctagaaatgatgaattattaattgaactcatcaat
acgaaagagggttttcatttatttgcatatccttttgaaggacgattggtgcatgaagtg
ttagcagcattggtggcttatcgtttgagtaaacttttacccattagcttttcaatagct
atgaatgattatggtttcgaattgttgagcgaaacggaaattccgatggatgaatctatt
gcttatgaagttttctcaccaaaaaacttaacagaagacattactttaagtatcaattct
acggaaatggccagaagaaagtttagagatattgcctgcatttctggtttagtttttcaa
ggctatcccggaaaatatgttgctaataaacatttacagtcatctgcaggtttatttttt
aatgtttttagtgattatgataaacataatttacttttgcgacaagcttacgatgaggtg
ttttatcagcaattagaagaaccaagattggctgcagctttagatcggattcaaaatgga
gcaataattattaccaatccagtgagttttactccactatcttttccaattaaagtagat
agtatgagggaaaatatgagttcagaagaattagaacaacgaattgccaggatgaaagcc
gaatcggagaaattcaattaa

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