KEGG   Pedobacter mucosus: LOK61_11540
Entry
LOK61_11540       CDS       T08291                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
pmuo  Pedobacter mucosus
Pathway
pmuo03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pmuo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LOK61_11540 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pmuo03019]
    LOK61_11540 (rny)
Messenger RNA biogenesis [BR:pmuo03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     LOK61_11540 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_KhpA-B
Other DBs
NCBI-ProteinID: UKT62392
LinkDB
Position
complement(2763817..2765388)
AA seq 523 aa
MEIVEILGYVFALIAGVAIGIVVGRYLLRNLLKQQEVAAQTKVKKILKDAENNAEILKKN
KLLEAKEKFLQLKAEHEQDVNAKNNVINQRENTMKQKEQSVNQRMENFNKKEQDLDKQKT
LLEKQTELAVKKQEEVEVLKTQHLTQLETIAGLSADEAKNQLVENLKEVARTQAMIQIKD
IVDEAKLTASKEAKKVVIQTIQRTATEAAIENSVSIFHIESDEIKGRVIGREGRNIRALE
AATGIEIIVDDTPEAIILSGFDPVRREIARLALHRLVTDGRIHPARIEEVVAKTKKQIED
EIVEIGERTVIDLGIHGLHPELIRMVGRMRYRSSYGQNLLHHSREVANFCATMAAELGLN
AKMAKRAGLLHDIGKVPDDNPELPHAILGMQLAEKYKEHPEICNAIGAHHDEIEMTSMIS
PIIQACDAISGARPGARREVVESYIKRLKDLEELALSYPGVEKTFAIQAGRELRVIVESE
RITDAQAELLAADISTRIQTEMTYPGQIKVTVIRETRSVAFAK
NT seq 1572 nt   +upstreamnt  +downstreamnt
atggaaatagttgaaatattaggatacgtatttgctttaatagcgggtgtagctatcgga
atagtggtaggaaggtacctgctgcgtaatttacttaagcagcaggaagttgcagcccaa
accaaggttaaaaagattttaaaggatgcagagaacaacgctgagatcttaaaaaagaat
aaattattagaagcaaaagagaaatttctacaattaaaagcagaacatgaacaagatgtt
aatgctaaaaataatgtaataaaccagcgtgaaaataccatgaagcagaaagagcaatcg
gtaaatcagcgcatggaaaactttaataaaaaagagcaggatcttgataaacaaaaaacg
cttttagaaaaacaaactgaattagccgttaaaaaacaagaagaagtcgaagttttaaaa
acgcaacatttaacacaattagaaacaattgctggtttatctgccgatgaagctaaaaat
caactggtagaaaacttaaaagaggtggctcgtactcaagccatgattcagattaaagat
atcgttgatgaagctaaattaacagcaagtaaagaggctaaaaaagtggttatccaaacc
attcaacgtaccgcaactgaagcagctattgaaaattctgtttctattttccacattgaa
agtgatgaaattaaaggtcgcgtaattggtagagaaggtagaaacattcgtgctttagaa
gcagctacaggtatcgaaattattgttgatgatacaccagaagcgattatattatcaggc
tttgaccccgttagaagagaaatagcccgtttagcgttgcaccgtttggtaacagatggc
cgtattcacccagctcgtattgaagaagtggtggctaaaaccaaaaagcaaattgaagat
gaaattgtagaaattggtgaacgtacggttatcgatttaggtattcatggtttgcatcct
gagttaattcgcatggttggtagaatgcgttaccgttcgtcttacggacaaaatctttta
catcactctcgtgaggttgctaatttttgtgcgacaatggctgcggaattaggcttgaat
gcgaaaatggcaaaacgtgccggtttattacacgatattggtaaggtgcctgatgataac
cctgaattgccacacgcaattttagggatgcaattagctgaaaaatataaagaacaccca
gaaatttgtaacgcaattggagctcaccatgatgaaatagagatgacctctatgatatct
ccaatcatacaagcttgtgatgccatttcaggcgctcgtccgggtgcacgtagagaagtg
gttgaaagttatattaaacgtttgaaagatttagaagaactggcactttcttatccaggt
gttgaaaaaacttttgctatacaagcaggtagagagttacgtgtaattgtagaaagcgaa
cgcataactgatgctcaggctgagttattagcagctgatatttcaacccgtattcaaacg
gaaatgacttatccagggcaaataaaggttaccgtaattagagaaactcgttctgtagca
ttcgcgaagtaa

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