Pedobacter mucosus: LOK61_11655
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Entry
LOK61_11655 CDS
T08291
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pmuo
Pedobacter mucosus
Brite
KEGG Orthology (KO) [BR:
pmuo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmuo03032
]
LOK61_11655
03400 DNA repair and recombination proteins [BR:
pmuo03400
]
LOK61_11655
Enzymes [BR:
pmuo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LOK61_11655
DNA replication proteins [BR:
pmuo03032
]
Prokaryotic type
DNA Topoisomerases
LOK61_11655
DNA repair and recombination proteins [BR:
pmuo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LOK61_11655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
UKT62415
LinkDB
All DBs
Position
complement(2790776..2791819)
Genome browser
AA seq
347 aa
AA seq
DB search
MIQGKDVVKASGLIYVTDAMHGIYRKGKVGSFIYEDKDGNKIEDEKHLARIKALVIPPAW
QNVWIANKENAYLQVTGIDAAGRKQYRYHAKWTSRRSDDKYYRLLEFGKALPKARKNLAK
DLRRKDFDERKVLAISVDVLQKTLIRVGNESYKQLYGSFGLTTLRDKHVKINGSKITMDF
IGKKGVQQKLELNDKNLAKLVKKCRDIPGQELFQFYSNGKEHKSIDSGKINNYIKEITGD
DFTAKDFRTWGGTLEALRQFANCSVDQGIKLNTKKTIVNVLDCVAKKLGNTRAVCKSSYV
YPLLLTAYENNELTTYLKNINKGKTIGKLSLEHDEKVLLSFLKINRK
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgatacaaggtaaagatgttgtaaaagcaagcgggctaatttatgttactgatgccatg
catggaatttaccgtaaaggcaaggttggctcattcatttatgaagataaggatggcaat
aaaattgaggatgaaaaacatcttgctcggattaaggctttagttattccgccagcatgg
caaaatgtatggatagctaataaagaaaatgcttatctacaagttacaggaattgatgct
gcggggagaaaacagtacagatatcatgctaaatggaccagtaggagatctgatgataaa
tattatcgcctactagaatttggaaaagctttaccgaaagctcgaaaaaacttagcgaaa
gatttacgtagaaaagatttcgacgagaggaaagtattggcaatttctgttgatgtgttg
caaaaaacgcttattagggttggcaatgaaagttataagcagctttatggctcttttggt
ttaacaaccttaagagacaagcatgttaaaataaatggtagtaaaataactatggatttt
atcggtaaaaaaggtgttcaacagaaattagaattaaacgataaaaatttagcaaaactc
gttaaaaaatgtagagatatacctggtcaagaattatttcaattttactcgaatggtaaa
gaacataaaagtatcgactcaggtaaaataaataattacatcaaagaaataactggcgat
gattttacagcaaaagattttagaacttggggaggtacgcttgaagcattaaggcaattt
gcaaattgcagcgtagatcagggtattaagctaaatactaaaaaaaccatcgtaaatgta
ttagattgcgttgcaaaaaaactcggaaatacaagagccgtttgtaagagttcttacgta
tatccattactacttacagcttatgaaaacaatgaacttactacttatttaaaaaatata
aataaaggtaaaacgataggtaaacttagtttagaacatgatgagaaggtattattatct
ttcttaaaaataaatcgtaagtaa
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