Pedobacter mucosus: LOK61_12520
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Entry
LOK61_12520 CDS
T08291
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
pmuo
Pedobacter mucosus
Pathway
pmuo00020
Citrate cycle (TCA cycle)
pmuo00640
Propanoate metabolism
pmuo00660
C5-Branched dibasic acid metabolism
pmuo01100
Metabolic pathways
pmuo01110
Biosynthesis of secondary metabolites
pmuo01120
Microbial metabolism in diverse environments
pmuo01200
Carbon metabolism
Module
pmuo_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pmuo_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
pmuo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LOK61_12520 (sucD)
00640 Propanoate metabolism
LOK61_12520 (sucD)
00660 C5-Branched dibasic acid metabolism
LOK61_12520 (sucD)
Enzymes [BR:
pmuo01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
LOK61_12520 (sucD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
IlvN
Ribul_P_3_epim
Motif
Other DBs
NCBI-ProteinID:
UKT62583
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All DBs
Position
complement(3004692..3005564)
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AA seq
290 aa
AA seq
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MSVLVNKDSKVIVQGFTGNEGTYHAEQMLAYGTNVVGGVTPGKGGQSHLDKPVFNTVKDA
VDQTGANVSIIFVPPAFAADAIMEAAEGGIKVIVCITEGIPTKDMIQVKEYISDLDVTLI
GPNCPGVITADEAKIGIMPGFIFKKGHVGVVSKSGTLTYEAVDQVVKAGLGITTAIGIGG
DPIIGTTTKQAVELLMNDPDTHGIIMIGEIGGGMEAEAARWIKENGTKPVVGFIAGQTAP
AGRRMGHAGAIVGGADDTAAAKMKIMRECGIRVVESPAEIGAAMAEELAK
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttttagtaaataaagattctaaggttatcgttcagggttttaccggaaacgaa
ggaacttaccatgctgagcagatgcttgcatatggtacaaacgtagttggtggtgttacg
cctggcaaaggtgggcaatcgcatttagataagcctgtttttaatactgttaaagatgcc
gttgatcaaacgggagcaaatgtatctataatttttgtgccaccggcttttgctgctgat
gcaattatggaagctgccgaaggtggtattaaagttattgtttgtataactgaaggtatc
ccaacaaaagatatgattcaggttaaagaatacatttcagatctagatgttactttaatt
ggtccaaattgccctggagtaattactgctgatgaagctaaaattggtattatgcctggt
tttatcttcaaaaaaggtcatgttggtgtagtttctaaatccggaacattaacttacgaa
gctgtagatcaggttgttaaagctggtttaggtataacaactgcaattggtattggtggt
gatccaattattggaacaactacaaagcaagctgtagaattattaatgaacgatccagat
actcacggtatcatcatgattggtgaaattggtggtggcatggaagctgaagctgctcgt
tggattaaagaaaatggtacaaaacctgttgtaggtttcatcgctggtcaaactgcacct
gccggacgtagaatgggccatgctggtgcaattgttggtggtgctgatgatacagcagct
gcaaagatgaaaattatgcgtgagtgtggaattcgtgttgtagaaagtccagctgaaatt
ggtgctgcaatggcagaagaattagcaaaataa
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