Pedobacter mucosus: LOK61_14270
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Entry
LOK61_14270 CDS
T08291
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
pmuo
Pedobacter mucosus
Brite
KEGG Orthology (KO) [BR:
pmuo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmuo03009
]
LOK61_14270
Enzymes [BR:
pmuo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
LOK61_14270
Ribosome biogenesis [BR:
pmuo03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LOK61_14270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
UKT62927
LinkDB
All DBs
Position
3405534..3407186
Genome browser
AA seq
550 aa
AA seq
DB search
MINKNNRNSRDDKSKTGSRSTEDRSSASGSDRRRSDDKDSKFKKSSDSKDNFRPRSSENK
DFKSKSFSDRKDSRPRTGGRDFKSKDEESKGFKFGDREFKSKDTNSRSEDRNFKPREGGS
RDYKPRTGDRDFKSREGGSRDYKPKEGGYRDFKAKDGDSRDSKSRTGDRDFKPREGGSRD
YKPRTGGDRDFKPREGGSKDFKPRPGGDRDSKPREGGSRDFKPRTGERDFKSKDGGSRDY
KPREGGSRDFKSRDGRSDDFKPSAGSSRDVKPREGADSRPFRKREESQPRDTEFNRPERT
VIAQGRKTNEDKGLIRLNRYISNAGICSRRKADELIAAGVVTVNGEAVTELGLKVDPSKD
LVRYNGELLKRERKVYVLLNKPKDYITTTDDPQERRTVMQLVDKASKERIYPVGRLDRNT
TGLLLMTNDGDLADKLSHPKNGITKMYQIELDKSLSQGDLNKISFGLELEDGLIKPDSIS
YVAGGTKKEIGIQIHSGKNRIVRRIFEHLGYNVEKLDRVVYGNLTKKDLPRGRWRYLEEH
ELIQIKHLIK
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgataaataaaaacaacaggaacagtcgggatgacaagtccaaaacgggtagccggagc
acggaagacagaagtagcgcttccggatctgatagaagaagatcagacgacaaagacagt
aaattcaaaaaatcatccgattcaaaagataacttcagaccaagaagttcggaaaacaaa
gattttaaatcaaaatcatttagcgacaggaaagattcaaggccaagaacaggaggccgt
gattttaaatctaaggatgaagaatctaaaggatttaaatttggagatcgcgaattcaaa
tcaaaagacactaattcgagatcagaagatcgtaacttcaaacctagagaaggcggatca
agagattacaaaccaagaaccggcgatcgcgattttaaatcaagagaaggcggatcgaga
gattacaaaccaaaagaaggtggatatagagacttcaaagctaaggatggagattcgaga
gattctaaatcgagaactggcgaccgcgacttcaagcctagagaaggtggatcaagagat
tacaaaccaagaacaggtggcgaccgtgattttaaaccaagagaaggtggatctaaagat
tttaagcctagaccaggtggagatcgcgattccaaaccaagagaaggcggatcaagagac
ttcaaaccaagaacaggcgaacgcgattttaaatcaaaagatggtggatcgagagactac
aaacctagagaaggtggatcaagagattttaaatctagagatggaagatcagatgatttt
aaaccaagtgctggaagctcaagagatgtaaaaccaagagaaggtgcagatagcagacct
tttcgtaaacgcgaagaaagtcagccaagagatacagaatttaaccgcccggaaagaact
gtaattgctcaaggccgtaaaacaaatgaagataaaggcttaattcgcctaaatagatat
atttctaatgctggtatctgttcccgccgtaaagcggatgaacttattgcagctggtgtg
gttactgtaaatggtgaagccgttaccgaattaggacttaaagtagatccttcaaaagat
ttagttcgctacaacggtgaattgctgaaacgtgaaagaaaagtttatgttttacttaat
aaacctaaagattatattaccacaacggatgatcctcaggagcgtcgtacggtaatgcaa
ttggttgacaaggctagtaaagagcgtatctatccagttggccgcttagatcgtaatact
acaggtttattattgatgacgaacgatggtgatttggcggataaattatctcatccaaaa
aacggaattaccaaaatgtaccagatagaattggataaatctttatcacaaggtgattta
aacaaaatttcttttggtttagaattagaagatggcttaattaaacctgatagcatttct
tacgttgcaggtggaacaaaaaaagaaatcggaatccaaattcatagtggtaaaaacaga
attgttcgccgtatttttgagcatttaggttataatgtagaaaaactcgatcgtgtagtt
tacggcaatttaaccaagaaagatttgcctcgtggaagatggcgttatctggaagaacat
gagttaatccaaattaaacatttaataaaataa
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