Pedobacter mucosus: LOK61_17565
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Entry
LOK61_17565 CDS
T08291
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
pmuo
Pedobacter mucosus
Brite
KEGG Orthology (KO) [BR:
pmuo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmuo03016
]
LOK61_17565 (miaB)
Enzymes [BR:
pmuo01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
LOK61_17565 (miaB)
Transfer RNA biogenesis [BR:
pmuo03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
LOK61_17565 (miaB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
UKT63564
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All DBs
Position
complement(4214514..4215932)
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AA seq
472 aa
AA seq
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MIDLQVQDKAHDEARQGEALILAAPVKADARKLYIESYGCAMNFADSEIVASILSETGFE
TTGDYHEADVIFINTCSIRENAETRVRNRLSQFGVEKRRNPKLIVGVLGCMAERLKSKFL
EEERLVDVVVGPDAYRDLPNLIEQVESGHKAVNVLLSREETYADISPVRLNSNGITAFIS
ITRGCNNMCSFCVVPFTRGRERSRDAHSIVAEAQSLFDIGYREVTLLGQNVDSYTWTSED
GTETVNFAQLLAQTALINPDLRVRFSTSHPKDITDEVLYTIAKYDNICNYIHLPVQSGNT
RVLDIMNRTYTREWYINRIDAIKNIIPGCAISTDIIAGFCTETEEEHQDTLSMLDYVKYD
FAYNFTYSERPGTLAARKFVDDIPEEVKKRRLSEILAKQQAHSLMRLQEWIGKTVRVLIE
GTSKKSDQDYCGRGDSGAMAIFPVIEGVKPGQYANVLIEKCTSATLIGRIVA
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgattgatttacaagtacaggataaggcacatgatgaggcaaggcagggagaagcactg
attttagctgctcctgttaaagccgatgcccgtaaattatatattgaaagttatggttgc
gctatgaatttcgcagatagtgaaattgttgcctctatactttcagaaactggatttgaa
actactggagattatcatgaagcagatgttattttcatcaatacttgttcaatccgtgaa
aatgctgaaacaagggtaagaaatcgcttgtctcaattcggtgttgagaagcgtcgtaat
ccaaagctgattgttggtgttttaggttgtatggccgaacgtttaaaatctaaattttta
gaggaagaacgtttggttgatgttgtggttggtcctgatgcttatcgtgatttaccgaat
ttaattgagcaagtagaaagtgggcataaagcggtaaatgtacttttatcccgtgaggaa
acttatgctgatatcagtccggtacgtttgaatagcaatggcattactgcatttatttcc
attacccgtggttgtaataacatgtgttctttctgcgtagtaccatttacacgcggccgc
gagcgcagcagagatgcacattctattgttgctgaagcgcaaagtttatttgacattggc
taccgtgaagttacgcttctaggtcaaaatgttgattcttacacctggacatcagaagat
ggaactgaaaccgtaaacttcgctcaactattggcgcaaactgctttaattaatccagat
ttgagggttcgtttttcgacttctcacccaaaagatattaccgacgaggttttatatact
atcgcaaaatacgacaacatttgtaattatattcatttgcctgttcaatctggaaatacc
cgtgttttggatattatgaaccgtacttatactcgcgaatggtacattaatcgaattgat
gccatcaagaatatcattcctggttgcgcaatctccactgatattattgcgggtttctgt
acagaaactgaagaagagcatcaggatactttaagcatgcttgattacgtaaaatacgat
ttcgcttataatttcacttattcagaaagaccaggaactttagcagctagaaaatttgtt
gatgatattccagaagaagtaaaaaaacgccgactttccgaaatattagcaaaacaacaa
gcacattcgttaatgcgtttgcaggaatggattggtaaaaccgttagggtactaattgaa
ggaacttcaaaaaaatctgatcaggattattgtggaagaggagatagcggagcaatggca
attttccctgtaattgaaggtgtgaaacccggccaatatgcaaatgtgttaattgaaaaa
tgtacttcagctacgctgattggaagaatagtggcataa
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