Pedobacter mucosus: LOK61_17820
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Entry
LOK61_17820 CDS
T08291
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pmuo
Pedobacter mucosus
Pathway
pmuo03030
DNA replication
pmuo03410
Base excision repair
pmuo03420
Nucleotide excision repair
pmuo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmuo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LOK61_17820 (polA)
03410 Base excision repair
LOK61_17820 (polA)
03420 Nucleotide excision repair
LOK61_17820 (polA)
03440 Homologous recombination
LOK61_17820 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmuo03032
]
LOK61_17820 (polA)
03400 DNA repair and recombination proteins [BR:
pmuo03400
]
LOK61_17820 (polA)
Enzymes [BR:
pmuo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LOK61_17820 (polA)
DNA replication proteins [BR:
pmuo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LOK61_17820 (polA)
DNA repair and recombination proteins [BR:
pmuo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LOK61_17820 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LOK61_17820 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
DUF3913
Motif
Other DBs
NCBI-ProteinID:
UKT63613
LinkDB
All DBs
Position
4284900..4287707
Genome browser
AA seq
935 aa
AA seq
DB search
MKKLFLLDGMALMYRAHFALSKNPRFTSSGINTSAVMGFTNTLLDVLKKEKPTHIAVVFD
TDAPTERHTTFEAYKAHRQAMPEDLAAAMPYVIKLITGFNIPVITSDGYEADDIIGTLAK
KAELKGYQVFCMTPDKDFAQLVSENIFIYKPARMGNDMEIMGVKEILAKWEIENVLQVID
ILGLWGDAVDNIPGIPGIGEKTSKLLIKQYGSMENIIAHAHELKGKQRENIENFAEQGLL
SKKLATIQLDVPVELDEESLLLCDPSKDLLEPLFTELEFRTLGRRVFGDEFSVTTARFSE
GTQTDLFGNQTGETITYTNTLEEEEPEEKLPPKTIENTEHNYMLVETAEQRAELIKTLLA
QKRISFDTETTGTDANMADLVGLSFSIKPGEGYYIPLSAIREEAQIIVDEFRVVLENDKI
EKIGQNTKYDILVLKWYGVQVQGKIFDTMLAHYLIDPDTRHGMDILSENYLGYTPISITK
LIGAKGKNQGTMRDVPVIDVVDYAAEDADVTLQLAHIFEPKLIELNAAKLAEEIENPLVY
VLADIEKEGVRIDIETLQAYSKELEKEIIKFEQNVYDKAGIKFNLASPKQLGEVLFDKLQ
LDPKAKKTKTGQYQTGEDVLSALAHKSDIVQDILDFRQLQKLKSTYVDALPLMVNPKTGR
VHTSYNQAVAATGRLSSNNPNLQNIPIRTERGREVRKAFIARDENHILLSADYSQIELRI
IADISKEENMLDAFSKGIDIHTATAAKVYGISIEDVDGTQRRNAKAVNFGIIYGQSAFGL
SQNLGIPRKEAADIIEQYFTQYPGIKRYMSDTMNFARENGFVETIMGRRRYLRDINSANQ
TVRGFAERNAINAPIQGSAADMIKIAMINIHKEMKAQKMQSTMTMQVHDELVFDVLRTEK
DAMKAIIHDKMVNAIKLTVPIVVEIGEGDNWLAAH
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaactttttcttttagatggaatggcgctcatgtacagggcacattttgcatta
agtaaaaacccaagatttacatcatcgggcatcaatacatctgcagtaatgggttttacc
aatacgttacttgatgttttgaagaaagaaaaaccaacgcatattgcagttgtatttgat
actgatgcgccaacagagcggcatacaacttttgaagcatacaaagcccatcgccaagcc
atgcccgaagatttagctgcggcaatgccttatgtgattaagctaattaccggatttaac
attcccgtaatcacatctgatggttatgaagctgatgatattatcggaacgctggctaaa
aaagcagagctaaaaggctatcaggttttctgtatgacgcccgataaagattttgcccaa
ctggtttcagaaaatatttttatttacaaacccgctcggatggggaacgatatggagata
atgggcgtgaaagaaatattagctaaatgggaaatagaaaatgttcttcaagtaattgat
attttaggattatggggtgatgcagttgataacatccctgggatacctggaataggcgaa
aaaacatctaagctattaattaagcaatatggatcgatggaaaacatcatcgcccatgca
cacgaattaaaaggaaagcagagagaaaatatcgagaattttgctgaacaaggtttactg
tccaaaaaattggcaactattcagctggatgttccagtagaactggatgaagaaagcttg
ttgctttgcgatccaagtaaagatttattagaacctctttttaccgaattagaatttaga
actttaggtcgcagggtatttggcgatgagttttctgtaactacagcacgattttctgaa
ggaacgcaaaccgacttatttggaaatcaaacaggcgaaaccatcacctataccaataca
ttagaagaggaagaacctgaagaaaaacttccaccaaaaacaatagaaaataccgaacat
aattacatgttagttgaaacagctgaacaaagagctgaattaattaaaactttacttgca
caaaaaagaatttcttttgatacagaaaccaccggaacagatgcaaatatggctgattta
gtaggtctatctttttcgataaaacctggcgaaggttattatattccgctttctgctatc
agagaagaagcgcaaattatcgtagatgaatttcgcgttgttctagaaaatgataagatc
gaaaagattggccagaatactaaatatgatattttagtgctaaaatggtacggcgttcag
gtgcaagggaaaatatttgacacgatgttagcgcattatttgatcgacccggataccaga
catggaatggatattttatcagaaaactatcttggctacacgccaatttccattacaaaa
cttataggtgcgaaaggtaaaaatcaaggaaccatgcgtgatgttcctgtgattgatgtg
gtagattatgctgcggaagatgcagatgtaactttgcaacttgcccatatttttgaacca
aaattaatagaacttaatgcagcaaaattagccgaggaaattgaaaatccattggtttat
gttttagctgacattgaaaaagagggtgttcgcattgatattgaaactttacaggcttat
tcaaaggaacttgaaaaagagattataaaatttgaacaaaacgtatatgataaagctgga
ataaagtttaatcttgcttctccaaaacaattaggagaagttttatttgataaacttcag
ctcgatccaaaggctaaaaaaactaaaactggtcaatatcaaacaggtgaagatgtttta
tctgcgttggcacataaaagtgatattgtgcaggatattttggattttagacagttacaa
aaattaaaatctacttatgttgatgctttaccgctaatggttaatcctaaaacaggccgg
gttcatacttcttataatcaggcggttgccgcaactggaaggttgagttctaataatcca
aatttacaaaatattccaattcgaacagaacgtggaagagaagttcgtaaagctttcatt
gccagagatgaaaatcatatcttattatctgcagattattctcagatagaattgcgcatt
attgctgatatcagtaaagaagaaaatatgctggatgcttttagcaaaggcatcgatatt
catactgcaacggcggcaaaagtttacggaattagcattgaagacgttgacggaacgcaa
cgcagaaacgcaaaagcggttaattttggtatcatctatggtcaatcagcttttggttta
tcacaaaatttaggtatcccacgtaaagaggctgctgatattattgaacaatattttact
caatatccgggcattaaacgttatatgagcgataccatgaactttgcccgtgaaaacggt
tttgtggaaacgattatgggtagaaggcgttatttaagagacatcaattctgccaaccaa
accgttaggggttttgcagaaagaaacgcgattaatgcgccaatacaaggttctgctgca
gatatgattaagattgcgatgatcaatattcataaagaaatgaaagcacagaaaatgcaa
tctaccatgactatgcaagtgcatgatgaattggttttcgatgttttacgaacggaaaaa
gatgcgatgaaagctataattcatgataaaatggttaatgcaattaaactaacggttcca
atagttgtagaaattggcgaaggcgataattggttagcagctcattaa
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