KEGG   Pedobacter mucosus: LOK61_17980
Entry
LOK61_17980       CDS       T08291                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K07713  two-component system, NtrC family, response regulator HydG
Organism
pmuo  Pedobacter mucosus
Pathway
pmuo02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pmuo00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    LOK61_17980
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:pmuo02022]
    LOK61_17980
Two-component system [BR:pmuo02022]
 NtrC family
  HydH-HydG (metal tolerance)
   LOK61_17980
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 HTH_8 AAA_5 AAA Mg_chelatase AAA_2 AAA_3 bpMoxR TIP49 AmiR_N AAA_22 nSTAND3 HTH_30 Methyltransf_31 HTH_17 AAA_7 APS_kinase
Other DBs
NCBI-ProteinID: UKT63645
LinkDB
Position
complement(4318050..4319450)
AA seq 466 aa
MKKKILIIDDEVNIGLLLSKFLTRNDFDVVSAITGNSALEKMTSQKFDLVLCDYRLEDTD
GKEILIKIKEQYPSTGVIIITGYSDIKLAVELIKLGAYDYITKPLYPDEILNTINKALES
QNVINKSSESKNHIEPSSVYGNYTEYIDGESDVAKNLLKQIELIASTSYSIILTGKSGTG
KECVAKAIHLNSLRRDQPFVAMDCGSLTKELAGSEFFGHEKGSFTGALYTKIGHFEQANG
GTLFLDEIGNLSYEIQATLLRTVQERKVKRIGSTKEIDLDVRIIVATNENLSENIIKGTF
REDLFHRFNEFSIHLPSLKHRGNDILIFANKFLTVANAELNKNIKGFSPGVEKSILNYGW
PGNVRELKNVIRRLALLTNGSEIQENVLPLELSNYDHFNESNEKNLKQVAETHAPKNLKN
AAQEAEYKAILSVLKQVNYNKTKAAEILKINRKTLYNKMKAIELGE
NT seq 1401 nt   +upstreamnt  +downstreamnt
atgaaaaagaagatacttattatagatgatgaggtaaacattgggcttttattatcaaaa
tttttaactagaaacgattttgatgtggttagcgccatcacaggaaattctgctttggag
aaaatgactagtcagaaatttgatttagtactatgcgattatcgcctggaagatactgac
gggaaagaaattttaatcaaaattaaagagcaatacccctcaacaggggtaatcattatt
accggatattctgatattaagctggctgtagaattaatcaaacttggagcatatgattac
atcactaagcctctgtaccctgatgaaatattaaacacaatcaataaagcacttgaaagt
caaaatgtaataaacaaaagttccgaatctaaaaatcatatagagccatcctcagtttat
gggaattatacagagtatatagatggagaaagcgacgttgcaaaaaatttattaaaacaa
attgaacttattgcatctacttcatacagcattattttaacgggtaagagtggcacagga
aaggaatgtgtagccaaagctattcatctaaatagtttgagacgagaccaaccatttgtg
gcaatggattgtggttcgctaactaaagaacttgcaggaagtgaatttttcggtcatgaa
aaaggatcttttaccggtgctttatatactaagattggccattttgaacaggcgaatggc
ggcacactttttttagatgaaattggaaatctatcatacgaaattcaagcaactttatta
agaacagttcaagaaaggaaagttaaacgcattggaagcacaaaagaaattgatttggat
gttcgaattatcgtggcaacaaatgaaaacctatctgaaaatattataaaaggtactttt
agagaagatttgtttcaccgctttaatgaattctctattcatcttccatcacttaaacat
agaggaaacgatattttaatatttgctaataaatttttaactgttgccaatgcagaactc
aataaaaatataaaaggtttttctcctggtgtagaaaaaagcattttaaattatggttgg
ccaggaaatgttcgagaattaaagaatgtaatacgaagacttgcattactcactaatgga
agtgaaattcaggagaatgttttgcctttagaactttctaattatgaccatttcaatgaa
agtaacgaaaaaaatttaaagcaggtagcggaaactcatgcgccgaagaacttaaaaaat
gcggcacaagaagcagaatataaggctattcttagcgtgcttaaacaggttaattataat
aaaaccaaagcggctgaaatccttaaaataaatagaaaaacattatataataaaatgaaa
gcgatagaattgggagaataa

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