Pedobacter mucosus: LOK61_18735
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Entry
LOK61_18735 CDS
T08291
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
pmuo
Pedobacter mucosus
Brite
KEGG Orthology (KO) [BR:
pmuo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmuo03400
]
LOK61_18735 (radA)
DNA repair and recombination proteins [BR:
pmuo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LOK61_18735 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
DnaB_C
ChlI
AAA_22
AAA
AAA_16
AAA_24
nSTAND3
Lon_C
AAA_5
AAA_14
Rad51
NACHT
NTPase_1
ABC_tran
DUF7129
SLFN-g3_helicase
ATPase_2
DZR
DEAD
CobU
bpMoxR
DUF7125
PAXNEB
RNA_helicase
Hrs_helical
zf-RING_10
Motif
Other DBs
NCBI-ProteinID:
UKT63793
LinkDB
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Position
complement(4486056..4487432)
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AA seq
458 aa
AA seq
DB search
MAKTKTAYFCQNCGHESAKWLGKCPSCNEWNTFVEEIVEKSSAAIPTWKSESGSRKLSKP
NKVDDIKSSTERRILTGDKELDRVLGGGLVEGSIVLIGGEPGIGKSTLMLQLALNLKGKK
LLYISGEESEQQIKMRAERITENASSDCYILTETSTQNIFKQIEILQPEILVVDSIQTLH
SSQIDSTPGSVSQVRECTAELLRFAKETGVPVFLIGHITKDGAIAGPKILEHMVDTVLQF
EGDRHHVYRILRSIKNRFGSAAELGIYEMQGTGLREVSNPSEILLSQRDEELSGIAIAAM
LEGVRPMLIETQALVSPAAYGNPQRSATGFDTKRMNMLLAVLEKRCGFKLSAHDVFLNIA
GGLRVEDPAIDLAVLVAIISSHQDIAVSTKNCFAAEVGLSGEIRAVNRIEQRIVEADKLG
FEMIYISKYNLKGLDLTKYNIEIKGVGKIEEVFELVFG
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
ttggcaaaaacaaaaacagcgtatttctgtcaaaactgtggacatgaatcagcaaaatgg
ctagggaaatgcccatcttgtaatgaatggaatacctttgtagaagaaatagtagaaaaa
agctcggctgcaattcctacctggaaaagcgaatcaggaagcaggaaactaagtaaacct
aataaagttgacgacataaaatcatcaactgaaagaagaattttaaccggtgataaggaa
ttagatcgggttttgggcggtggattagtagaaggatctattgttttaattggtggagaa
cctggtattggaaaatctacactgatgttacagttagcgcttaacttaaaaggaaagaaa
ttattgtatatttctggggaagaaagtgagcagcaaattaaaatgcgggcagaaagaatc
acagaaaacgcatcttcagattgctatattttaacggaaacatctactcaaaatattttt
aagcaaatagaaattctacaaccagaaatattggtggttgattctattcaaaccttacat
tcatcacaaattgattctaccccaggaagtgtttcgcaggtgagagaatgtacagcagaa
ttattaagatttgcaaaagaaactggcgttccagtatttctaattggtcacattacaaaa
gatggagccatcgccggaccaaaaatattagagcatatggttgataccgttttgcaattt
gagggcgacaggcatcatgtgtatagaattttaaggtcaattaaaaacagattcggttct
gcagcagagttgggtatttatgaaatgcagggaacaggtttgagagaagtctccaatcca
tcagaaattcttttatcacaacgtgatgaagagctaagtggaatcgctattgcagcgatg
ctggagggtgttagaccaatgcttattgaaacccaagctttggttagtcccgcagcatat
ggtaatccacaaagatcagccaccggatttgacactaaaagaatgaacatgcttttagcc
gttttagaaaaaagatgtggcttcaaactaagtgctcatgatgtttttttaaatattgca
ggcggattaagagtggaagatcctgctattgatttggctgttttggttgccataatttct
tcgcatcaggatattgcagtttccacgaaaaactgttttgctgcagaagtagggttatcg
ggcgaaattagagcggtaaatagaattgaacagagaattgttgaagctgataaattaggc
tttgagatgatatatatttcaaaatataatttaaaaggattagacttaactaagtataat
atagaaatcaaaggagttggtaaaattgaggaggtttttgaattggtgtttgggtaa
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