Pedobacter mucosus: LOK61_18755
Help
Entry
LOK61_18755 CDS
T08291
Name
(GenBank) integration host factor subunit beta
KO
K03530
DNA-binding protein HU-beta
Organism
pmuo
Pedobacter mucosus
Brite
KEGG Orthology (KO) [BR:
pmuo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmuo03032
]
LOK61_18755
03036 Chromosome and associated proteins [BR:
pmuo03036
]
LOK61_18755
03400 DNA repair and recombination proteins [BR:
pmuo03400
]
LOK61_18755
DNA replication proteins [BR:
pmuo03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LOK61_18755
Chromosome and associated proteins [BR:
pmuo03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
LOK61_18755
DNA repair and recombination proteins [BR:
pmuo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
LOK61_18755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
UKT63797
LinkDB
All DBs
Position
complement(4490985..4491287)
Genome browser
AA seq
100 aa
AA seq
DB search
MTKADIISEISTKTGIEKVDVQETVEAFFKVIKTSMIGGENVYVRGFGSFVVKKRAQKTA
RNISKNTAIIIPEHFVPSFKPAKIFVDKVKNNSKKIQVEA
NT seq
303 nt
NT seq
+upstream
nt +downstream
nt
atgactaaggcagatattatttcagaaatatcaacaaaaaccggaattgagaaggttgat
gtacaggaaacggttgaggcatttttcaaggttatcaaaacgagtatgattggcggtgaa
aatgtatatgtaagaggcttcggaagctttgttgttaaaaagagagcgcagaaaactgct
aggaacatctcaaaaaatactgcaataattatcccagaacattttgttccaagctttaaa
ccagcaaaaatatttgttgataaagtaaaaaacaattctaaaaaaatccaagtagaagct
taa
DBGET
integrated database retrieval system
