Pedobacter mucosus: LOK61_19440
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Entry
LOK61_19440 CDS
T08291
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pmuo
Pedobacter mucosus
Pathway
pmuo00300
Lysine biosynthesis
pmuo00470
D-Amino acid metabolism
pmuo01100
Metabolic pathways
pmuo01110
Biosynthesis of secondary metabolites
pmuo01120
Microbial metabolism in diverse environments
pmuo01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
pmuo00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LOK61_19440 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LOK61_19440 (dapF)
Enzymes [BR:
pmuo01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
LOK61_19440 (dapF)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
CntK_N
Motif
Other DBs
NCBI-ProteinID:
UKT63930
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All DBs
Position
4652965..4653750
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AA seq
261 aa
AA seq
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MKINFYKYQGAGNDFILIDHTLNPLNNIDNELVKNLCDRRFGVGADGLMFITKHNQYDFE
MHYFNADGNLGSMCGNGGRCIVAFAKHLGIIENETNFLAVDGPHYARISDSGEWIDLQMI
DVDTINKDGDAFVLNTGSPHYVVEQKDLVDFDVLNEGKRIRYNNIYSEKGINVNFVENMG
DYLFVRTYERGVEDETYACGTGVTAVAIAMAKSKNETGHILTKIKVLGGDIKIEFDYDGI
KFTNVFLCGPAKLVFAGEVNY
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataaatttctataaatatcaaggagcaggcaacgattttatcctaatagatcat
actttaaatccattaaataatattgataatgaattagttaagaacttatgcgataggcgt
tttggagttggtgcagatggattaatgtttattacaaagcataatcaatatgattttgaa
atgcactattttaatgctgatggtaatttaggaagcatgtgcggaaatggaggaagatgt
attgttgcttttgccaaacatttaggaattattgagaacgaaactaattttttggcagtt
gatgggcctcattatgccagaatttcagatagtggcgaatggattgatttacaaatgatt
gatgttgatacgattaataaagatggtgatgcctttgttttaaataccggatcgccacat
tatgtagttgagcaaaaagacctcgtagattttgacgttttaaacgaaggaaaacgcatt
cgatacaataatatttattcagaaaaaggtatcaatgtgaattttgttgaaaatatgggc
gactatctatttgttcgtacttatgaacgtggagtagaggatgaaacctatgcttgtgga
acaggtgttactgcagtagcaatcgcaatggcaaaatctaaaaacgaaacagggcatatt
ttaactaaaataaaagttttaggcggagatatcaagatagagtttgattatgatggcatt
aaatttaccaacgtttttttatgcggaccagcgaaattggtttttgcaggtgaagtaaat
tattaa
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