Protobothrops mucrosquamatus (Taiwan habu): 107282239
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Entry
107282239 CDS
T05763
Symbol
PTBP1
Name
(RefSeq) polypyrimidine tract-binding protein 1
KO
K13218
polypyrimidine tract-binding protein 1
Organism
pmur
Protobothrops mucrosquamatus (Taiwan habu)
Brite
KEGG Orthology (KO) [BR:
pmur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmur03019
]
107282239 (PTBP1)
03041 Spliceosome [BR:
pmur03041
]
107282239 (PTBP1)
Messenger RNA biogenesis [BR:
pmur03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
107282239 (PTBP1)
Spliceosome [BR:
pmur03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
107282239 (PTBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
107282239
NCBI-ProteinID:
XP_015665487
LinkDB
All DBs
Position
Unknown
AA seq
556 aa
AA seq
DB search
MDGIVQDITVGTKRGSDELFSTCVTNGPFIMSSNSASAANGNDSKKFKGDSRSAGVPSRV
IHIRKLPSDVTEAEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVSYYTTIAPV
LRSQQIYIQFSNHKELKTDNSPNQARAQAALQAVNSVQSGNLALSASAAAVDAGMAMAGQ
SPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLS
LDGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDNQPSLDQTMAAAFGAP
GIISASPYAGAGFPPAFAIPQAGLSVPNVHGALAPLAIPSAAAAAAAAGRIAIPGLTGAG
NSVLLVSNLNPERVTPQCLFILFGVYGDVQRVKILFNKKENALVQMADGNQSQLAMSHLN
GQKLHGKPIRITLSKHQTVQLPREGQEDQGLTKDYGNSPLHRFKKPGSKNFQNIFPPSAT
LHLSNIPPSIIEDDLKLLFSSNGGMVKGFKFFQRDRKMALIQMGSVEEAIQSLIELHNHD
LGENHHLRVSFSKSTI
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggacggcattgtccaagatataacagttggtacaaagcggggatctgacgaacttttt
tctacttgtgtcactaacggaccctttatcatgagcagcaactctgcttctgcagccaat
ggaaatgacagtaaaaaattcaaaggtgacagcagaagtgcaggagttccatcacgagta
atccatatccgtaaattacctagtgacgttacagaagctgaggttatttccttggggttg
ccttttggaaaggtcacaaacctattaatgttaaaaggaaaaaatcaggcttttatagaa
atgaacacagaagaagcagctaatactatggtgagctactatactacaattgctcctgtg
ctccggagtcagcagatctacatccaattttctaatcacaaagagttgaagacagataat
tctccaaaccaggcacgtgctcaagcagccttgcaagcagtaaattctgtccagtctggg
aatctggcactgtctgcttctgctgcagctgtggatgctggtatggccatggctggtcag
agcccagtcctgaggatcattgtggaaaacctcttctatcctgttactctagatgtcctc
catcagattttctccaaatttgggacagtgctgaaaataatcacatttaccaagaataac
cagtttcaagcacttctgcaatatgcagaccccgtgagtgcccagcatgccaaattgtct
ctcgatgggcagaacatctacaatgcttgctgcaccctccgtattgacttttccaagctc
acaagcctcaatgtaaaatacaacaatgataagagcagagactacaccagaccagacctg
ccttctggagacaaccaaccttcccttgatcagactatggcagctgcttttggcgctcca
gggatcatttcagcctctccttatgcaggagccggcttccctcctgcttttgcaattcct
caagcaggcctctcagttccaaatgtacacggagcacttgctcctttggctatcccatca
gccgcagcggccgcagctgccgcaggacggattgctattcctggccttaccggggcaggg
aactccgttctgttggttagcaatttgaacccagagagagttacaccccaatgcctcttt
attcttttcggggtatatggtgatgtacaaagagtgaagattttgttcaataaaaaggag
aatgccttggttcaaatggcagatggcaatcaatctcaactggccatgagccatctcaat
ggtcaaaagctgcatgggaagcccatccgcatcactctgtcaaagcaccagacagtgcag
ctgccccgtgaaggacaggaagaccaagggctgaccaaggattatggcaactcccctctt
catcgctttaagaagccgggttccaagaactttcaaaacatctttcccccttctgccact
cttcacctctccaatattccgccttcaataatagaagatgacctcaagctgctcttctca
agcaatggtgggatggtgaaaggcttcaaattcttccagagagaccgcaagatggctctc
attcagatgggatccgtggaagaagccattcagtcactcatcgagctccacaaccacgac
cttggtgagaaccaccacttgcgtgtgtccttttcaaaatccacaatttaa
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