Protobothrops mucrosquamatus (Taiwan habu): 107282919
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Entry
107282919 CDS
T05763
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1-like
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
pmur
Protobothrops mucrosquamatus (Taiwan habu)
Pathway
pmur03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmur00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107282919
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmur03019
]
107282919
Messenger RNA biogenesis [BR:
pmur03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
107282919
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
TSX
Motif
Other DBs
NCBI-GeneID:
107282919
NCBI-ProteinID:
XP_015666243
LinkDB
All DBs
Position
Unknown
AA seq
516 aa
AA seq
DB search
MGETRPFANTGRYLSFSLFSDDNGKPEDGPISGHTETHPLQDIPKETRIVISEDQELLQQ
TIPSGEDEEEESDSDDDDIRVTIGNIKTGAPSYMGTPMNLNLKTGRGYGAPASAKSQPKG
IDLEASGNINGLPVIEVDLESFEDKPWRKPGADLSDYFNYGFNEETWKAYCEKQRRLQLG
LEPSVPICTENKITVQQGRTGNAEKEPENNIVKMDFKTDFVALVGGRIKAGPPPNRKLGG
TIDVIGGQAGTIRRVEGRRRDKHASEENPIQVLGDHGSKPQPAQPPQQQPFVPPAGPPPA
LSGPPPHFLHPPLPPVASVPPPLHPPGLFPPPLAPPPALLIPTLDGQPASYSNRQPPPFG
YNSTDSGFITYPPISTSHTPWVTTVDKTSSASDSSHWEYSGSRRERDRERDRTPTTSEYN
NDDERYRYYSRERSYDFERDYRRSRDRSREREDRHRERRHRDKEESSKHKSSRRKQHESE
EGESHRRHKHKKNKRSKEKEASEDGLAEGNEQDAKE
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgggggaaacccgccccttcgccaacactggcaggtatttgtctttctccctattttca
gatgacaatggtaagccagaagatggaccaatatctggacacaccgaaactcatccattg
caagacattcctaaggagaccaggatcgttatcagtgaagaccaagaactgttgcagcag
accatcccaagtggggaagatgaggaggaggagagcgacagtgacgatgatgacattcgc
gtcacaattggcaacatcaagactggagccccatcttatatggggactccaatgaatctg
aatctaaaaacgggtcgaggctacggagcaccagcatcagccaagtcgcagcctaaaggt
attgatttagaggcttcggggaatattaacggcttgccggtaatcgaggtggatttagaa
tcgtttgaagacaaaccgtggaggaaaccaggtgccgacctttccgattacttcaactac
ggattcaatgaggaaacatggaaagcctactgtgaaaaacagcgccggcttcagctgggc
ctggagccttcggtccccatctgcacggaaaataagatcacggttcaacaaggaagaaca
ggcaatgccgagaaagaacccgagaacaacatcgtcaagatggattttaaaactgatttt
gttgctctcgttggcggaaggataaaagccgggcctcctccgaacaggaagctgggtggg
acaatcgacgtgattggtggtcaggctggcaccatccggagggtggaaggaaggcggcgc
gacaaacacgcttctgaagaaaaccccattcaggtacttggagaccatgggagcaaacct
cagcctgctcagcccccccagcagcagccatttgtgcccccggcaggcccaccgccagca
ttaagtgggcctccgccccactttctccatcctcctctgccgccagttgcctccgtccca
ccacccctccaccctccagggctgtttcctcccccacttgctccaccaccagctctcttg
attccaactctggatggccagccggccagctacagcaaccggcagccacctcccttcggc
tacaactccacagattcaggtttcatcacctacccgcccatctcgacctcgcacactccc
tgggtgaccacagttgacaagacctccagtgcttcagacagcagccactgggaatactcg
ggctcaaggagagagagggacagagagcgggaccggacacccaccacgagcgaatataac
aatgacgatgagagataccgttattatagccgggaacgcagttacgattttgagcgtgac
taccgccggagtagagatcgcagccgggagcgtgaagatcgtcaccgggaaaggaggcac
agagacaaagaagagagcagcaaacataaatcgtcacggcgcaagcagcacgagagcgaa
gaaggggagagccaccgtcgacacaagcacaaaaagaacaagcgcagcaaagagaaggag
gcgagcgaggatggacttgcagaaggaaacgaacaggatgccaaggagtag
DBGET
integrated database retrieval system
