Protobothrops mucrosquamatus (Taiwan habu): 107283240
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Entry
107283240 CDS
T05763
Symbol
USP39
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
pmur
Protobothrops mucrosquamatus (Taiwan habu)
Pathway
pmur03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmur00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107283240 (USP39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmur03041
]
107283240 (USP39)
Spliceosome [BR:
pmur03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
107283240 (USP39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
107283240
NCBI-ProteinID:
XP_015666599
LinkDB
All DBs
Position
Unknown
AA seq
590 aa
AA seq
DB search
MAARVKREPRSPQPWSGFPMGAPRGTAGWGRVKREPAEEIAVKQEPEEEEEEAEGGDTEP
TVSLQGVCVEDLGRPLQEGVPRRDPRPLETGSSSPPGILVVGTVLFLIYFPFSVKYGRFD
PEDRRSRHCPYLDTINKSVLDFDFEKLCSISLSHINVYACLVCGKYFQGRGLKSHAYIHS
VQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDITYVLKPTFAKQHITSLDKQAKLSRAYD
GTTYLPGIVGLNNIKANDYANAVLQALSNVPPLRNYFLEEENYRHIRRPPGDIMFLLVQR
FGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKKNFQITKQGDGVDFLSWFLNALHSALGG
TKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEEKEQLLRNEEYQEKMVESTFMYLTLDLP
TAPLYKDEKEQLIIPQVPLFNILAKFNGIMEKEYKTYKENFLKRFQLTKLPPYLIFCIKR
FTKNNFFVEKNPTIVNFPITNVDLREYLSEEVQAVHKNTIYDLVANIVHDGKPTEGAYRI
HVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQIWKRRDSQEESHQQGT
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcgcgtcaagcgggagcctcgcagcccgcagccgtggtcgggcttcccgatg
ggcgcgcctcgcggaacggccggctgggggcgggtgaagcgggagcccgccgaggagatc
gcggtcaagcaggagcccgaggaggaggaggaggaggcggagggcggcgacacggagccc
acagtctcccttcagggggtctgtgtggaggatctgggccgacctctccaggaaggggtg
ccacggagagatcctaggcccctggaaaccggcagttctagcccaccaggcattctggta
gttggaaccgtactgtttctgatttatttccctttttcagtaaagtatggtcgatttgat
ccagaagatcgccggagcaggcattgtccatacctggacaccataaacaagagcgtcctg
gattttgactttgagaagctgtgttcaatctcactctcacatatcaatgtctatgcttgt
ttggtgtgtgggaaatatttccagggccgtggcttgaagtcccatgcttacattcacagt
gtccagttcagtcatcacgtgttcctcaaccttcacaccttgaagttttattgcctgccg
gacaactatgagatcattgactcttctcttgaggacatcacttatgtactgaagccaacc
ttcgccaagcagcacatcaccagtttggacaagcaggctaaactctcacgcgcctatgat
ggcaccacatacctgccaggcatcgtgggattgaataatatcaaagccaacgactacgcc
aatgcagttctccaggcgttgtcaaatgtccctcccctgcggaattacttcctggaggaa
gagaattacaggcacatcaggcgtcctccgggggacatcatgttcctgctggttcagagg
tttggagagctgatgaggaagctgtggaacccacggaacttcaaagctcacgtctccccc
catgagatgctgcaggccgtggtcctgtgcagtaagaagaacttccagatcaccaagcaa
ggtgatggagttgactttctttcctggttcctgaatgccttgcactctgctctcgggggg
acaaagaagaagaaaaagaccattgtaaccgatgtcttccaaggctccatgcggatattc
accaagaaattgccacaccctgatctgcctgccgaagaaaaggagcagctgctccggaac
gaggagtatcaagaaaaaatggtggagtccactttcatgtacctgaccctggatctcccc
accgctcccctctacaaggatgagaaggagcagctcatcatcccacaagttcccctcttc
aacatactggccaagtttaatggaataatggaaaaggaatacaagacttacaaagagaac
ttcctgaagcgcttccagctcaccaagctgcccccttaccttattttctgtatcaagagg
ttcaccaagaacaacttctttgtggaaaagaatcccaccattgtcaactttcccatcacg
aacgtagatctccgggaatacctctctgaggaagtgcaggcagtgcacaagaacaccatc
tacgatctcgtcgcaaacattgtgcatgatggcaaacctactgaaggagcctaccggatt
catgtgttgcatcacggcacaggcaagtggtatgagctgcaggacctgcaggtgaccgat
atccttccccagatgatcacgctgtctgaggcttacatccagatctggaaaaggagagac
agccaagaagagagccaccaacaaggaacgtga
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