Protobothrops mucrosquamatus (Taiwan habu): 107283328
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Entry
107283328 CDS
T05763
Symbol
VIM
Name
(RefSeq) vimentin
KO
K07606
vimentin
Organism
pmur
Protobothrops mucrosquamatus (Taiwan habu)
Pathway
pmur04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pmur00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
107283328 (VIM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmur03019
]
107283328 (VIM)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pmur04812
]
107283328 (VIM)
04147 Exosome [BR:
pmur04147
]
107283328 (VIM)
Messenger RNA biogenesis [BR:
pmur03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
107283328 (VIM)
Cytoskeleton proteins [BR:
pmur04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
107283328 (VIM)
Exosome [BR:
pmur04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
107283328 (VIM)
Exosomal proteins of other cancer cells
107283328 (VIM)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filament
Filament_head
DUF1664
FKBP15
TolA_bind_tri
DUF4407
ANG-1
GAS
DUF4515
DUF7491
BLOC1_2
Sec10_N
DUF7121
ApoLp-III
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
107283328
NCBI-ProteinID:
XP_015666703
LinkDB
All DBs
Position
Unknown
AA seq
457 aa
AA seq
DB search
MSTRTSSSSSSYRRMFGGGRPSSTRSVTSTTRYSLGSSIRPSSVRMVSSSPGGLYASKAV
RVRSSLPPMRIGGDAMVDFSLADAINTEFKANRTNEKAELQELNDRFANYIDKVRFLEQQ
NKILMAELEQLKGKGTSRLGDIYEEEMRELRRQVDQLTNEKARVEVERDNLAEDILRLRE
KLQDEILQREDAENTLQSFRQDVDNASLARLDLERKVETLQEEIIFLKKLHEEEIRELQA
QIQDQHIQIDMDVVKPDLTAALRDVRQQYESVATKNLQEAEEWYKSKFADLSEAANRNND
ALRQAKQEASEYRRQIQSLTCEVDALKGTNESLERQMREMEDACSAEVANYQDNIARLQE
EIQNMKEEMARHLREYQELLNVKMALDIEIATYRKLLEGEESRINVPIPTFASLNLRETN
LESIPIDTHSKRTLLIKTVETRDGQVINETSHHDELE
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgagcacccggacctcctcctcttcttcctcctatcgccgcatgttcggcggcgggcgg
cccagcagcacccgctctgttacttctactacccgctactcgctgggcagttccatccga
ccgagctccgtccgcatggtctcctcctctcccggcggcctctatgcctccaaagccgtg
agggttcgaagcagccttccgccgatgcgcatcggcggcgatgccatggtcgacttctcc
ctggccgacgctattaacaccgagttcaaggcgaaccgcaccaacgagaaggccgagctg
caggagctcaacgaccgcttcgccaactacatcgacaaggtgcgcttcctcgagcagcag
aacaagatcctgatggccgagctcgagcagctcaagggcaaaggcacctcccgcctgggc
gacatctacgaggaggagatgcgcgagctgcgccggcaggtggaccagctcaccaacgag
aaggcgcgcgtggaagtggagcgcgacaacctggccgaggacatcctgcgtctgcgcgag
aaactgcaggatgagatacttcagagagaagatgctgagaacaccctacagtctttcagg
caggatgttgacaatgcctccttggcccgtctggatctggaacgcaaagttgaaaccctg
caagaagaaataattttcttgaagaaacttcatgaggaggaaatccgtgagctgcaagcc
caaatccaggatcagcacattcagattgacatggatgttgtcaagccggatctcacggct
gccctccgtgatgtacgtcagcagtacgaatctgttgctacaaagaaccttcaggaagct
gaggagtggtacaagtccaaatttgcagatttgtctgaagcagccaacaggaacaatgat
gccctgcgccaggctaaacaagaagccagtgagtaccgcaggcagatccagtctctcacc
tgtgaagtggatgctcttaaaggaaccaatgagtctttggaacgccagatgcgtgagatg
gaagatgcctgttcagctgaagttgccaactaccaagacaacattgccagacttcaggag
gaaatccagaacatgaaagaagaaatggctcgtcatctccgcgagtaccaagagctgctc
aatgtaaagatggctcttgatattgaaattgctacttacaggaaactgctggagggcgag
gagagcagaattaatgtgccaatcccaacttttgcttccctgaatctgagagaaactaat
cttgagtctattccgattgatacccactccaagagaacactgctaatcaagactgttgag
actagagatggccaagtaatcaatgaaacttctcatcatgatgagctagaatga
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