Protobothrops mucrosquamatus (Taiwan habu): 107283907
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Entry
107283907 CDS
T05763
Symbol
SPG11
Name
(RefSeq) spatacsin
KO
K19026
spatacsin
Organism
pmur
Protobothrops mucrosquamatus (Taiwan habu)
Brite
KEGG Orthology (KO) [BR:
pmur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmur03400
]
107283907 (SPG11)
DNA repair and recombination proteins [BR:
pmur03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
107283907 (SPG11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spatacsin_C
AAR2
Motif
Other DBs
NCBI-GeneID:
107283907
NCBI-ProteinID:
XP_029139153
LinkDB
All DBs
Position
Unknown
AA seq
2352 aa
AA seq
DB search
MRSLRLSGLSSARLPGVSLPGAWEDFVWASGEAEEAAAGGRLRLLAVTEARALLLYEAAS
ESGRWDATLLRGVPEERLRALAASRDADLLSISSLQVLSFKNSRAILLLNNFMIVHLIFP
GGELGEEVEGCFRLDLPPQTLERTVNVTFCRGIIFLLDETGWIHIFGAIDGAYLAHISVS
LYQSRGQEEGNQDMPFPLVQLSISYDLSMAVVVSRSSCVAAVDLNLYFREYPDHLFCKQQ
SFEGLDEDDLSSSGFSMKSLQPLFQTDRSRKTHVLPLNDIHSHNYSPHLDTDVELPWYQH
LLPLEPLNSKTWDTSAASLFQEVAFVLSSSRGKDTKSTKDRRWKNIHLSDPEEPGNLDCK
QVTGFHVLFTVSSESEGLTLVLWDLVTQDITQSCVGKNSFFVEYTREEPLWLVLSETGLS
LFLFGFTQEEFLNRLIIYGSASTVDSLCRLNGWGRCSIPVHALEAGLENRQLDTVDFFLK
NKENIFSLSEASSVQDQPVNNMSDFYLKSVEELRPALDLLCKAIQENDVETQSKHFSEQL
LNLTLSFLNKQLREIFTHREEVDENMVQCIDILTSYITKLRTLMIRFPHKPFGVVSQPWD
SEDNLPQMDQRHWEAFDTEQAVTEALLSNRVPEAQTFFRLTHNPAQDLGQLTRIGLEMAY
KSLLKNDISEASRLLRNMGLSVKQQLHKICFYTTDYHVRDFLVSALQEEDVLPETEKEMI
DFVHEVENIYSGTFQRKEKNAACCRSWRKEPDGINVAALDSFLSCTQDRIHNREHRVMLN
WAEWWSPSTRERVLLLVRAQEGEFRFCNPEALWMYLSSWHDWVNISSWISESRPEGSPAN
WPPLPLGAIGRRTLCSHYLRNEVLDILARNGTFVPAELEDFEGLLQRVACTGGLMQEPHP
LLGYVSAGGLELHACFILYCLERGLDHILYSYLDYYRLFSSACPILNDKELREAHPWFEF
LVQCRDIANNPGDADMIFQASLANAQILIPSNQASVSTMLLEGRTLLALATTMFARGGID
QIVQKGDGREKVDAQLFRMALAPYPKLRAALFPQITPHGIPPPDLSLYHLVQCLAPFDST
KLFGWQSANTLAIPDICSDLPHFSCSALVNKHAIIENLDFSYYLHHERPSFAFGAFLTQQ
LSKSDLPKELVQQVAKEAYALALSVFYVPPLAATSVCFLEMLGLQSLKLRVDAKAANVIL
SFMSRREEPQHHSIRQSLVEKLGELADGERTAAEDLLVCLEEAVWEKVDHQEINKTSGEA
RRHWSLVIQFCQLHHIKLSTSYLRACARSNEWLQFVTEAQMHGYQPAEVIPLLRDFPLPL
REHLELALGHLQPPKEGDLQALEQKPQDLFHVLLQSQEQPCPWRHLLAASVKHQAPVLSV
LAACSQDASILHCLCVWIITSMDRSATREVIGHIEGKVETHEWSLADLALLWHWLLERGK
ARTLLHGFQLFLKDSPLLIMLEVYELCMDYKSYSQAKIKLLTFQDSLSKLQAECERGLPV
LPGPWLEMQASFLLELMLHQCRTEYEFRKLLELLADAGTALLQGPDLKKLSALSAILKDS
PISVSRTLLSNYSLERFQEECQRILEQLQESSSFSVARNVAELAALPVDNVVIQEVLQNI
LLLKQIGHWTQKRTRVGFWKKCHENYVQNAVSNRAASSFFAAQVDLVSEGPEDQRGSGIS
ERQLLLTLAGHWLARSDPIPVDDLEKIEKEIWRCHITRQTFSQGTGQMEPRGSHQVSISS
ELSFDSLAKEFSFSKVAALSTPKYLELRGFPSQDTSTVMLSKAEVGSLSFLIGRLLDEGS
VHEAARLCRYFSFYNRDVALILHCRRLALGEAAQRCFHPEIQALLAAESSKRHRGEAAAE
KKRLKSSSSLDSWPSVEGSSPDSGVVGSLQTLVAECVHGRNYCRQTLYLYELSKELGCSF
SEIAVHDSEKLLRAILSSQQPDWYKKAQAFITNQGLEPGAVAELVAEEITRELLVPSQGR
GTLNPAEESQRFLQLAKLCQDHTLVGMKLLDKVSSVPHGELACTVELLILAHNCFSLTCH
MEGITRVLQAARLLTDEHLAPNEEYGLVVRLLTGIGRYNEMTYIFDLLHEKHYFEVLMRK
KLDPNGTLKTALLDYIKRCRPGDSEKHNMIALCFSMCREIGENHEAAANVQLKLIESQPW
EESLLDVPSLKKLLMKALTLFLDAAESYSKDFCVCQSLRCRKLARLITLQLHFLTTPHKT
QLINLRRGSLLPCVLALPRFYQAAVVAEAYDFTPDWSEVLHQQVILKGDFSYLEEYKQQG
LLKAGTFEEVAQKFKQQAASESAVRNLKKLLTYCEDIYVYYKLAYDNQFYDVVNMLLNDA
QTGCCLNDLLAN
NT seq
7059 nt
NT seq
+upstream
nt +downstream
nt
atgagatctctgcgcctgtcggggctgtcctcggcgcggctccccggcgtctcgctgccg
ggcgcctgggaagacttcgtgtgggcgagcggcgaggcggaggaggcggcggcggggggc
cgcctgcggctgctggccgtcaccgaggcgcgggcgctgctcctctacgaggcggcttcc
gagtccgggcggtgggacgcgaccctcctgcgcggcgtccccgaagagcggctgcgggcc
ctggcggcctcccgggacgcagacttactatctatttcatccttgcaagtgctgtcattt
aaaaatagcagagctatactgttgctcaacaactttatgattgtacacctaatttttcct
ggaggagaactgggggaagaggtggaaggctgctttagacttgatttgcccccacaaact
ttggaaaggacagtaaatgttactttctgcagaggtatcatcttcttgctggatgagacc
ggatggatacatatatttggtgctatcgatggtgcctatttggcccacatcagtgtttct
ctctatcagtcacgggggcaagaagagggaaaccaggatatgccatttcctcttgtgcag
ctaagtatatcatatgatctcagcatggctgtggttgtcagccgctccagctgtgttgct
gctgttgacctcaacttgtacttcagagaatatcctgaccatttattttgcaagcagcaa
agctttgaggggctggatgaagatgacctcagtagttcaggtttcagcatgaagtccttg
cagcctttatttcagacggacagatcccggaagacacacgtactacctttgaatgatata
cactcacacaattattctccacatttggatacggatgttgagttgccttggtatcagcat
cttctgcccttggaacctcttaactccaagacttgggacacttctgcagcgtccctcttt
caagaggttgcgtttgttctttcaagctccagagggaaagatactaaaagcaccaaagac
aggcgatggaagaatatacatttaagtgacccagaagagcctgggaatcttgattgtaaa
caggtgacaggttttcacgtgctgttcactgtctcaagtgagagcgaaggactgactctt
gtcctgtgggatttggtgacccaggatatcacacagtcttgtgtggggaaaaactccttt
tttgtggaatataccagggaggaaccactatggcttgtcctttcagagactggcctctcc
ttgttcctgtttggctttacacaagaggaattcttgaacagactgatcatctatggaagc
gctagcactgtagattccctttgccgcctcaatggatggggaaggtgttctattccggtc
catgccttagaggctggtttagagaaccgacagttggacactgtggattttttcctcaag
aataaagagaacattttcagtctgtctgaagcaagctctgtgcaagatcagcctgtaaat
aatatgtcagatttttacttgaagagtgttgaagaattgaggccagcgttggatttactt
tgtaaggcaattcaagaaaatgatgtggagacccagagcaagcatttctctgagcagctg
ttgaacctcaccttatcttttctcaacaaacaactccgtgagatttttacacacagagaa
gaggtggatgaaaacatggtccagtgcattgacattttaaccagctacatcactaaactc
aggacacttatgatcaggttccctcataagccatttggtgtcgtaagccagccctgggat
tctgaagataacctaccccaaatggaccaaagacactgggaagcatttgatacagagcaa
gcagttactgaagcccttctaagcaacagagtgccagaggcacaaacctttttccgtttg
actcacaaccctgcccaggatctcgggcagctcacccggataggcctggagatggcttac
aaaagcctcctgaagaatgacatcagtgaagcttccagacttttaaggaacatgggcctc
agtgtgaagcagcaactgcacaaaatatgtttctatacaacagattaccatgtcagggat
ttcttggtgagtgccttacaagaggaagatgttcttcctgaaacagagaaggaaatgata
gactttgtgcatgaggtggaaaatatttattcaggcaccttccagagaaaggaaaagaac
gcagcttgttgcaggtcttggagaaaagaaccagatggtatcaacgttgctgctttggat
tcctttctgagctgcactcaagacagaattcataacagggagcacagggtaatgctaaac
tgggctgagtggtggtctccatctacacgggaaagggttctcctccttgtgagagctcag
gaaggggaatttaggttctgtaatcctgaggccctctggatgtatttgtcgtcttggcac
gattgggtaaatatcagttcatggatttctgaatcccgacctgaaggcagccctgcaaac
tggccgcccctccctctaggagccattggccggaggaccttatgcagccactacttgcga
aatgaagtcttggacatcctagctagaaatgggacttttgtgcccgcagaactcgaagac
tttgaaggcctgctgcaaagggtggcctgcaccggaggcctgatgcaggagccgcatcct
ctcctgggctacgtctctgcaggcggcctagagcttcacgcatgctttatcctttattgc
ttagaacgggggctggaccatattctctactcctacctggattattaccgtttattttca
tcagcctgtcccattttgaacgataaagagctacgtgaagctcacccttggtttgaattt
ttagtgcaatgtcgggatattgccaacaatcctggagatgcagacatgatttttcaggct
agcctagccaatgcccagatcttgattcccagcaaccaggccagcgtgagcaccatgctg
ttggagggacgaacccttcttgccctcgctaccaccatgttcgccaggggagggattgac
cagattgttcagaagggagacggaagagagaaggtggatgcgcaactcttcaggatggca
cttgctccttaccccaagcttagagctgccctcttccctcagatcacgcctcacgggatc
ccccctcccgacctttctctctatcaccttgttcagtgcttggctccctttgactccacc
aagttgtttggctggcagtcagcaaatacgctcgccattcctgatatttgcagcgacctg
cctcacttctcatgctcagctcttgtaaacaagcatgctataatagagaatcttgacttc
tcctattacttacatcatgagcgcccctcgtttgctttcggggcgtttttaactcagcag
ctatcgaagagtgacctcccaaaggagttggttcagcaggtggccaaggaggcctacgcc
ctggccctctcggtcttctatgtgcctcctctggctgcaacctctgtctgcttcctggag
atgctgggcctgcagagtctgaagctcagggtggatgccaaagccgccaacgtgattctg
agcttcatgtccaggagagaggagccccagcaccactccatccggcagtccttggtggag
aagctgggagagctggctgatggagagagaactgcagccgaagacctgctcgtctgcttg
gaggaagccgtttgggagaaggtggaccatcaggagatcaacaagacctcgggcgaggcg
aggcggcactggtccctggtcatccagttttgccagctccaccatatcaagctgagcacg
tcgtacctgagggcctgtgcgcgttcgaacgaatggctgcagtttgtgactgaagcgcaa
atgcacggctaccagccagcggaggtgatccctctcctccgggacttccccctgcccctg
cgggagcacttggagctggccctgggccatttgcagcccccgaaggagggtgacttgcag
gcgcttgagcagaagccgcaggacctgttccacgtcctgctccagagccaggagcagccg
tgcccttggcgacacctcttggctgcctcggtgaagcaccaggcgcccgtcctgagcgtg
ctcgctgcttgctcccaggatgccagcattctccattgtctctgtgtttggataataacg
tccatggaccgttctgccacccgtgaggtgatcgggcacatcgaaggcaaggttgaaacc
catgagtggagccttgcagacctggcccttctctggcactggctgttggagagagggaag
gccaggaccctccttcatggcttccagctcttcctgaaggattctcctttgctgataatg
ttggaggtgtatgaattgtgcatggactacaaaagttacagccaagccaagatcaaactt
ctcacatttcaagacagcctttcaaaacttcaagctgagtgtgagagggggctgcccgtc
ctccctgggccctggctggagatgcaggcctccttcctactcgagctgatgctgcaccag
tgcagaacagagtacgaattcagaaagctcctcgaactgcttgcagatgcaggaacggct
cttctccaagggccagatctgaagaagctcagtgccctgagtgccatcttgaaggattcg
cccatctccgtcagtcggactctgctgagcaattacagccttgagaggttccaggaggag
tgccaaaggattctggagcagctgcaggagagcagctctttttctgtggctcgcaacgta
gcagaactggcagcactgcctgtagacaacgtggttattcaggaggtgctccagaacatc
cttctcttgaaacagatcggccactggactcaaaaacggacaagggtcgggttctggaaa
aagtgccacgagaactacgtgcaaaatgccgtctctaatcgggctgcctccagcttcttc
gcggctcaggtagacttggtctcggagggcccggaggatcagagggggtccggcatctcc
gagaggcaactcctgcttactttagctggacactggctggccagaagtgacccgattcct
gttgatgatctggaaaagatagagaaggaaatttggcggtgccacatcacgcgacagact
ttcagccaaggcacagggcagatggagcccagaggttctcaccaggtttccataagtagt
gagctgtcctttgactccttagctaaggaattctccttttctaaggttgctgctttaagc
actcctaagtatctggagctcagaggtttcccttcccaggacacatccacagttatgctt
tccaaagctgaagtggggtccctgagttttctgattgggcgtcttctggatgaaggaagc
gtgcatgaagctgcccggctttgccgctatttcagcttctacaacagagacgtagcgctg
atcttgcactgcagaaggctggccttgggagaggccgctcagcgctgcttccatccggag
atccaggctctcctggcagctgagagcagcaagaggcatagaggagaagcggcagccgaa
aagaaacggttgaagagttcctcaagcctcgattcctggccctcggtggagggctcctct
ccggacagcggagttgttggcagcctgcagactttagttgcagaatgtgtgcatggccgg
aattattgtcgtcagactctctacctttacgaactctccaaagagcttggctgttccttc
agcgagatcgccgtccatgattcggagaagctgcttcgggccatcctgtcctcacagcag
ccagactggtacaagaaggcccaggccttcatcaccaaccaggggctggagccgggggct
gtggctgagcttgtggccgaggaaatcacacgcgagctgctggtgccttcccagggaaga
ggcaccctcaaccctgccgaggagagccagaggttcctgcaactggccaagctttgccag
gaccacacacttgtcggcatgaaactgctggataaggtttcctccgtgccccatggggag
cttgcctgtactgtggagctcctgatactggcccacaactgtttcagcttgacttgccac
atggaggggattactcgtgtcctccaagctgcccggctgctcacagatgaacacttggcg
ccaaacgaagagtacggcctcgtggttcgacttctcactggcatcggcagatacaatgag
atgacctacatctttgacctgctccatgaaaaacattactttgaggtgctgatgagaaag
aagttggacccgaacgggaccctcaagacagccctgctagactacatcaagcgttgccgg
ccgggagacagcgagaagcacaacatgattgccctctgcttcagcatgtgccgggagatt
ggggagaaccacgaggctgcggccaacgtccagctgaagctcattgaatcccagccatgg
gaggagagccttctggacgtgccaagcttgaagaagctcctgatgaaagccctcaccctc
ttcctggatgctgcagagagctactccaaggacttctgcgtgtgccagtccttgcgctgc
aggaagttggccagactcatcaccctgcagctccacttcctgactactccccacaagacc
cagctgatcaacctgaggcgggggagcttgctgccctgcgtcctggccctgcccaggttc
taccaggcagccgtggtggccgaggcgtatgactttaccccggactggtctgaggtgctc
catcagcaggtgatcctgaagggcgacttcagctacctggaggagtacaagcagcagggg
ctgctcaaggccggcacctttgaagaggtcgcccagaagttcaagcagcaggcagcgagt
gagtctgctgtaagaaacctgaagaagctcctgacttactgtgaggacatttacgtctat
tacaagctcgcctatgacaaccagttctacgatgtggtgaacatgctcctgaatgacgcc
cagacaggctgctgtctcaacgatttgctggccaattag
DBGET
integrated database retrieval system
