Protobothrops mucrosquamatus (Taiwan habu): 107284056
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Entry
107284056 CDS
T05763
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
pmur
Protobothrops mucrosquamatus (Taiwan habu)
Pathway
pmur03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pmur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
107284056 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmur03400
]
107284056 (MSH2)
DNA repair and recombination proteins [BR:
pmur03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
107284056 (MSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_II
MutS_IV
MutS_III
MutS_I
MCU
HTH_RNase_II
AAA_27
Motif
Other DBs
NCBI-GeneID:
107284056
NCBI-ProteinID:
XP_015667552
LinkDB
All DBs
Position
Unknown
AA seq
947 aa
AA seq
DB search
MAASIDACVSAPREGCWPEGSGAESGFIRTQKLESVALSKMNFESFLRNLLLIRQYRAEV
YKNKAGNKSIKETEWYLAYKIRSIKDKQKYQDIKGLGFESYQDPDYSFTAVFIIKGTQKL
ESVALSKMNFESFLRNLLLIRQYRAEVYKNKAGNKSIKETEWYLAYKGSPGNLAQFEDVL
FSNHDMSSSVGVVAIKLSSVDGQKVVGVGYVDSLARKLEVSEFTDNDQFSNLEALLIQMG
PKECLLPVGETAGDMEKLRQVVQRGGILITDRKKTEFSTVDAVQDLNRLLQSGKKEHVSS
AALPEMDKQVAISSLSVVIKYLELLNDESNFGQFELTTFDLNQYMTLDHAAVRALNLFQN
ASEFAQACRICKMLDMVGAFMEDGEVRQILQEDILRRFPDFSRIGKKFQKKATLQDCYKM
YQAINQIPNVIQALEKKNGNCNMLLDTVFTKPLKELNCDFSNFQKMIDETLDMNTVETHE
YLVKPSIDPNLAELRENMDKLERKMQGVLKTAAKELSLEAGKSIKLECNAQFGHFFRITY
REEKVLRNNLKYKILETQKNGVKFSNSALKEINEEYMKSRKEYEDMQDAVVKEIINVASG
YKEPIQILNDVIAQLDAIVSFAHASNAAPTPYVRPVILEKGQGRIILKASRHPCIEVQDD
VAFIPNDVTFEKDIQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCDSAEVTIVDC
ILARVGAGDSQLKGVSTFMAEMLETSSILRTATEHSLIIIDELGRGTSTYDGFGLAWAIS
EYIASKMKAFAMFATHFHELTALADQIPTVNNLHVTALTTKETLTMLYRVKKGACDQSFG
IHVAELAAFPKHVIECAKAKALELEDFQNIGMSQEEEDEEPAAKRCHREKQEGEQIIQDF
LSQVKAMPLTEMSEEEIRTKLKELKDYVLRKNNSFVNGIISRINGAS
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctccatagacgcttgtgtttctgctccacgggagggatgctggcctgaaggc
tcaggtgccgaaagcggctttattcgaactcagaaactcgagagtgttgcgctcagcaag
atgaattttgaatcttttttgcgaaatcttcttctgattcgtcagtacagggctgaagta
tataaaaataaggcaggaaataaatccatcaaagagactgaatggtatttggcctacaag
attagatcaattaaagacaaacaaaaatatcaagatataaagggccttggctttgaaagc
taccaagaccctgattacagctttacagcagtttttataatcaaaggaactcagaaactc
gagagtgttgcgctcagcaagatgaattttgaatcttttttgcgaaatcttcttctgatt
cgtcagtacagggctgaagtatataaaaataaggcaggaaataaatccatcaaagagact
gaatggtatttggcctacaagggttctccaggtaaccttgctcaatttgaggatgttctt
tttagtaaccatgatatgtcctcttcggttggtgttgtagccattaagctgtcctcagtt
gatggacagaaagttgttggagtaggatatgtggattcactggcaagaaaactagaagta
tctgaatttacagataatgatcagttttccaaccttgaagcactgttgatacaaatgggg
ccaaaggaatgtttgctacctgttggggagactgctggagatatggagaaactgaggcag
gtggttcaaagaggaggaatcctgatcacagataggaaaaagactgaattttcaacagta
gatgctgttcaagatctcaaccgtttgttgcaatcaggaaagaaggagcatgtgtctagt
gcagcattacctgaaatggataagcaggttgccatctcttctctatctgttgtgattaaa
tacttagagctcttaaacgatgagtctaactttggacaatttgaacttaccacgtttgac
cttaatcagtatatgaccctggatcatgctgctgtcagagcccttaacctttttcagaat
gcttcagaatttgcccaagcttgtagaatatgtaaaatgctagatatggtgggggccttc
atggaagatggagaagtaagacaaattcttcaagaagatatcctccgccgcttcccagac
ttcagtcgaataggaaaaaaatttcagaagaaagctactctgcaggactgttacaaaatg
tatcaggcaattaatcagatacctaatgtgatacaggcactggaaaaaaagaatggaaac
tgcaatatgctactagatacggtattcacaaaacctcttaaagagctaaactgtgatttc
tccaatttccaaaagatgattgatgaaactttggacatgaatacggtggaaacccatgaa
taccttgtgaaaccttccattgaccccaatcttgctgaattgagagaaaatatggataag
ctggaaagaaaaatgcagggtgtgctgaaaactgcagccaaggaactgagtttggaagct
ggcaagagtatcaaattagaatgcaatgcacagttcggacattttttcagaattacctac
agagaagagaaggttctgcggaataatttgaaatataagatcttggaaacccagaagaat
ggggtgaaattctctaacagtgcattgaaagagattaatgaagagtatatgaagagcaga
aaagaatatgaagacatgcaagatgctgtagttaaagaaataatcaatgttgcatcaggg
tataaagaacccattcagattctcaatgatgtcattgcccagctagatgccattgtcagt
tttgctcatgcatcaaatgcagcaccaacaccatatgtgcgcccagttattctagaaaaa
gggcaaggaagaataatcttgaaagcttccaggcacccttgcattgaagttcaagatgat
gttgccttcatcccaaatgatgttacttttgagaaggacatacaaatgttccacatcatt
actgggccaaacatgggaggaaaatcaacttacatacgacagactggggtgatcgttctt
atggcccaaattggctgttttgtgccatgtgactctgcagaagtgactattgttgattgc
atcttggctcgagttggagctggagatagtcagctgaaaggggtatctaccttcatggcc
gaaatgctggaaacgtcctccatccttaggactgcaaccgaacattccttgataatcatt
gatgagttagggagaggaacatcaacatatgatggatttggattggcctgggcaatttct
gaatatattgccagcaaaatgaaagctttcgctatgtttgctactcattttcatgaactg
acagcactggctgatcaaatacccactgtaaataacttgcatgttacggcattaactaca
aaggaaaccctgacaatgttgtaccgtgtgaaaaaaggggcctgtgaccagagctttggt
atccatgtagcagaattagctgcctttcccaaacacgtgattgagtgtgccaaagccaaa
gctctggaactggaggacttccagaacattggaatgtctcaggaggaggaggatgaagaa
ccagctgccaaaagatgccacagggagaagcaggagggggaacaaataattcaagatttc
ctttctcaagtgaaagcaatgccgttgacagaaatgtctgaagaagaaatccggaccaaa
ctaaaggagttaaaagactacgttttaaggaaaaataattcttttgtaaatggaattatt
tcccgcatcaacggtgcctcatga
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