Protobothrops mucrosquamatus (Taiwan habu): 107284172
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Entry
107284172 CDS
T05763
Symbol
CNOT1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
pmur
Protobothrops mucrosquamatus (Taiwan habu)
Pathway
pmur03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmur00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107284172 (CNOT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmur03019
]
107284172 (CNOT1)
Messenger RNA biogenesis [BR:
pmur03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107284172 (CNOT1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
107284172 (CNOT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
107284172
NCBI-ProteinID:
XP_015667671
LinkDB
All DBs
Position
Unknown
AA seq
2376 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECASLITKPNFISTLSYAIENPLHYQKSLKPSPHLFTQLSKVIK
LSKVQEVIFGLALLNSFNPDLQVFAAQFIKQKLPDLLRSYIDADVSGNQEGGFQDIAIEV
LHLLLSHLLFGQKGAFGVGQEQIDAFLKTLRRDFPQERCPVVLAPLLYPEKRDILMDRIL
PDSGGIAKTMMESSLADFMQEVGYGFCTSVEECRSIITQFGVGEVTAAQVARVLGMMART
HSGLTDGIPLQSISAPGSGIWSDGRDKNDGTQTHTWNVEVLIDVLKELNPTLNFKEVTYE
LDHPGFQIRDSKGLQIVIFGIQRGLGLEVFPVDLIYRPWKHAEGQLSFIQYSLINPEIFC
FADYPCHTVSTEILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSFPIKHC
PDMLVLALLQINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
AMAEWYMRGEQYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQPKSAQLPPETLATMLACLQACAG
SVTQELSETILTMVANCSNVVNKARQPPPGVMPKGRPPSASSLDAISPVQIDPLAAGMAS
LSLGGPTVPHTQSVPGFPPNLSSAFSTPQSPAKAFPPLSTQSQNTPFSGIGGLSSQLPVG
GLTTGSLGIGTGTLGLPAVNNDPFVPRKLNTSGLNQPTFQQSKVKPSDLSQVWPEANQHF
SKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSNIKREREVFNCMLRNLFEEYR
FFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFTSKMYYFGIAALDR
FKNRLKDYPQYCQHLASISHFIQFPHHLQEYIEYGQQSRDPPVKMQGSITTPGSIALAQA
QAQAQAPAKTPLTGQVSTVVTTATTTTTVAKTTVAPVGRVSFKKDVPPSINTTNIDTLLV
ATDQTERIVEPPENVQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVS
IEPNFHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLG
MITLAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSVRSVVFRPPNPWTM
AIMNVLAELHQEHDLKLNLKFEIEVLCKNLALDINDLKPGSLLKDKDRLKNLDEQLSAPK
KDIKHTEELPPITTTTTSTTSATSTTCTATVPPQPQYSYHDINVYSLGGLAPHITLNPTI
PLFQAHPQLKQCVRQAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDSEESRMRVA
AHHMMRNLTAGMAMITCREPLLMSIATNLKNSFATALRAASPQQREMMEQAAAQLAQDNC
ELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPVVLTYQAERMPEQIRLK
VGGVDPKQLAVYEEFARNVPGFLPTNDSSQPTGILAQPMKQAWATDDVAQIYDKCMAELE
QHLQSVPHTLAMNPQTQALRSLLEAVVVARNSRDAIAALGLLQKAVEGLLDATSGADADL
LLRYRECHLLVLKALQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVELLIRNHLVNMQ
QYDLHLAQSMENGLNYMAVAFAMQLVKILLVDERSVAHMTEADLFHTIETLMRINAHSRG
NAPEGLPQLMEVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDDPPGLREKAEYLLREWV
NLYHSAAAGRDSTKAFSAFVGQMHQQGILKTDDLITRFFRLCTEMCVEISYRAQAEQQHN
PAANPTMIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGVLLQDHDV
RQSEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKAPGFVYAWLE
LISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELAKPMQILYKGTLRVLL
VLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKVDMLSEINI
APRILTNFTGVMPPQFKKDLDSYLKTRSPVTFLSDLRSNLQVSNEPGNRYNIQLINALVL
YVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLNAIANQLRYPNSH
THYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPAFKFWNH
EFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
7131 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggccttgtctcaaatcagctacctggtggacaattta
actaagaaaaactaccgagccagccagcaggaaatacagcatattgtgaaccggcacgga
cctgaagcagacaggcatttgctacgctgtctcttttctcatgtggatttcagtggcgat
ggtaaaagtagcggtaaagatttccaccagactcagtttctgatccaggagtgtgcatca
ttgattacaaagccaaacttcatttcaacactgtcctatgctattgaaaatccattgcat
tatcaaaagagtcttaagccatcaccccatctattcacccaactgagcaaagttatcaaa
ttaagcaaagttcaagaggttatttttggtcttgctttgttgaactctttcaatcctgat
ctacaagttttcgctgctcagtttattaaacagaaacttcctgatcttctgcgctcatat
attgacgcagacgtcagtggcaatcaagaaggtggctttcaagatattgcaatagaagtc
ttgcacctccttctttcccatcttctttttgggcagaagggagcctttggggttggacag
gaacaaattgacgcgttcctcaaaacattgcgcagagatttcccccaggaacgttgccct
gtggtgcttgcaccactcttataccctgaaaaacgggacattctaatggataggatcctg
cctgactctggagggatagcaaaaaccatgatggagagttctcttgcagacttcatgcag
gaagttggctatggcttttgtacaagcgtggaagaatgtcgcagtatcatcacacagttt
ggtgttggggaagttacagctgcccaggttgccagagttttgggaatgatggctcgaaca
cactctggattgacagatggcattccattacagtctatttctgcccctggaagtggaatt
tggagtgatggaagagataaaaatgacgggacacagactcatacgtggaatgttgaagtt
ctgattgatgtgcttaaagaactgaacccaaccttaaacttcaaggaagtaacctatgag
ctggaccaccctggatttcaaattcgtgatagcaagggcctgcaaattgtaatcttcgga
attcagcgtggattaggattggaggtttttccagttgacctcatatacagaccttggaaa
catgctgaaggccagctctcattcattcagtattccctcattaacccagagatcttctgt
tttgccgactatccctgtcatactgtttccacggagatcttgaaagcaccaccagaggat
gataatcgagaaattgccacatggaagagcctagatttgattgaatccctgttgcgtttg
gcagaggtgggccaatatgaacaagtcaagcagctcttcagcttccctatcaagcactgt
ccagatatgttggtcttggctttgctgcagatcaacacttcttggcatactttgcggcat
gaactcatctccacacttatgcccattttccttggcaaccacccaaattctgctatcatc
ttgcattatgcgtggcatgggcagggtcagtccccttcaattcgtcaactcatcatgcat
gccatggcagaatggtacatgagaggagaacaatatgaccaagcaaaattatcacgtatt
ctagatgtggcccaagacctgaaggcattgtctatgctgctgaatggtactccatttgcc
tttgttattgaccttgctgcccttgcctctcggcgggaatacctcaaactagacaaatgg
ctcacagataaaattcgggagcatggggagcctttcatccaagcttgcatgactttcttg
aagagaagatgtccctctatcttgggtggtcttgctccagagaaagaccagcccaaaagt
gctcaacttccaccagagaccctagcaacaatgctagcttgtcttcaggcttgtgctgga
agtgtaacgcaagagctgtcggaaactattctcaccatggtagccaactgcagcaatgta
gtgaataaagccagacagccaccgcctggtgtaatgcccaaaggacgtccccccagtgct
agcagcctggatgccatctcccctgtgcagattgatccgcttgctgctgggatggcatct
ctcagtttaggtggcccaacggttcctcatacccagagtgtgcctggatttcctccaaac
ttgagttctgcttttagtactcctcagtcaccagcaaaagcatttccaccgctttccaca
caaagccagaacacaccttttagcgggattggtgggctctcttcacagcttccagtaggt
ggtctcacaacaggtagtctgggtatcggaactggaacccttggcctccctgcagtgaat
aatgatccatttgtgccaagaaagctgaacacatcaggactgaaccagcccacattccag
cagagtaaggtgaaaccttctgacttatctcaggtatggccagaggctaatcagcacttt
agcaaagagattgatgatgaagccaacagctattttcagcgtatttataatcacccaccc
catcccaccatgtctgtagatgaggtgttagaaatgctacagagatttaaggactctaac
attaaacgggagcgagaagtatttaactgtatgctgaggaatttatttgaagaatatcgt
tttttcccgcaatatcccgataaagagctccacataacagcctgcctctttggagggata
atcgagaagggattggtgacctatatggccctgggcctggccctgcgctacgtgcttgaa
gccttacgaaagccttttacatctaaaatgtactattttggaattgctgcattagataga
tttaaaaatagattgaaggactaccctcagtattgtcagcacctggcttctattagtcac
tttatacagttccctcatcacctgcaggagtacattgaatatggacagcaatcaagagat
cctcccgtgaagatgcaggggtccatcaccacgcctggaagtattgctctggcccaggct
caggcccaggcccaggccccagcaaaaacgcctctcactggccaggttagcactgtagtc
accaccgccaccaccaccaccactgtggcaaagacaaccgttgcgcctgtgggcagagtc
agcttcaagaaagatgtgccaccttctattaatacaaccaacattgatactctactagtg
gccacagatcaaacagagagaattgtagaacctcctgaaaatgtgcaggaaaagattgct
tttatctttaataatttgtctcaatccaacatgactcagaaggttgaggaactgaaggaa
acagtgaaagaagaattcatgccttgggtttcgcaatatctcgtgatgaagagagttagc
attgagccaaacttccatagtctttattcaaatttccttgacactcttaaaaatccagaa
tttaataaaatggttttgaatgaaacatacagaaatatcaaggtgctgcttacatcagat
aaagctgctgctaacttctcagaccgttcattgctgaagaacctgggtcactggctgggg
atgataacactggcaaagaataaacccatcttgcacacggacttggatgtcaaatctttg
ctgctagaagcttatgtaaaaggacagcaggaattgctgtatgtagtgccatttgttgct
aaagtattggaatccagcgtaagaagtgtggttttcaggcccccaaatccatggaccatg
gcaatcatgaatgttcttgcagagcttcatcaggagcatgacttaaagctgaatctgaag
tttgaaattgaagtgctctgcaaaaacctggcccttgacatcaatgatctaaaacctggt
agtctcctaaaagacaaggacaggttgaaaaacctggatgaacagttatctgctccaaag
aaggatataaaacacacagaagaactaccaccaattactactaccactacttccacaact
tcagctaccagcactacatgcacagctactgttcctccacagccacagtacagttaccat
gatatcaacgtatactccctgggagggctagctccacacattactctaaaccccactatt
cccctgttccaagcccacccacagttaaagcagtgtgtgcgccaagccatagagcgtgca
gttcaagaactggttcatccagtagtggaccgctcaattaaaattgccatgactacttgt
gaacagatagtgaggaaggattttgcgctggactcagaagagtcacgcatgcgtgtggca
gcgcatcacatgatgcggaacctgacagctggcatggccatgattacctgcagggagccc
ttgctgatgagcattgcaaccaacctgaagaacagctttgccactgcgttgcgggcagct
tcaccacagcagagggagatgatggagcaggcggcagcccagttggctcaagataactgt
gagttggcctgctgcttcattcagaaaacagcggtggaaaaagcaggtcctgaaatggac
aagaggctggcgactgaatttgagctccgaaaacatgcccggcaagagggccgcaggtac
tgtgatcctgtggttttgacttaccaggctgagcgtatgccagaacagatcaggctgaag
gttggtggtgtggacccaaagcagctagctgtatatgaagaatttgcacggaatgttcct
ggtttcctgccaacaaatgattcaagccaaccaacaggaatcctggcccagcctatgaag
caagcctgggcaactgatgacgtggcgcagatctatgataaatgcatggcagagctggag
cagcacctgcagtctgttccccacactctggccatgaatccccagacacaagcactgcgg
agccttttggaggctgtcgttgtggcccgtaattctcgagatgctattgcagcccttgga
ttgctacagaaggccgttgaaggactattagacgccaccagtggtgcagatgcggaccta
ctcctccggtaccgtgaatgccatttgcttgtattgaaagccctgcaagatggccgcgcc
tatggctctccctggtgcaacaagcagataacaagatgcctgattgagtgtcgagatgaa
tataaatacaatgtagaagcagtggagctcctgattcgtaaccatctagttaacatgcaa
cagtacgaccttcacctggctcagtccatggagaatggcttgaactacatggcagtggcg
tttgcaatgcagctggtgaagatcctgctggtggatgagagaagcgtggctcacatgaca
gaagcagatttgttccataccattgaaactctgatgaggataaatgctcactccagagga
aatgctccagaagggttgccacagttgatggaagtggtacgatccaactatgaagccatg
attgatcgtgctcatggtggacccaactttatgatgcattctgggatctctcaagcttca
gaatacgatgatcctccaggcctgagggagaaggcagagtatctcttgagggaatgggtg
aatctttaccattctgcagccgctggtcgggacagcaccaaagccttttctgcatttgtt
ggacagatgcatcaacaagggattctgaaaactgatgacttgatcacaagattcttccgt
ctttgcactgaaatgtgtgttgaaatcagctatcgtgctcaagctgagcagcaacacaac
cctgctgcaaaccccactatgatccgtgccaagtgctatcacaacttggatgcctttgtg
cgccttattgcactgttggtgaagcactctggagaggctaccaacacagtcacaaaaatc
aacctgcttaataaggttcttgggatagtggtgggagtccttttgcaggatcatgatgtt
cgtcagagtgaatttcagcaacttccctaccaccgcattttcatcatgttactgttagaa
ttaaatgctcctgaacatgtcctggaaactatcaactttcagaccctgacagctttctgc
aatacatttcacatcctgcgacctacaaaagctccaggttttgtttatgcttggttagaa
ctgatctcccatcggatatttattgcaaggatgctggcacatacaccacagcagaagggt
tggcccatgtatgcacagctcttgattgacctgttcaaatatttggctcctttcctgaga
aatgtggaacttgccaagcctatgcaaattttgtacaagggaacactgcgtgtgttactg
gtattattacatgatttcccagaattcctttgtgattaccactatggattttgtgatgtg
attcctccaaactgtattcagctaaggaatctgattttgagtgcctttccacgtaatatg
aggcttcctgaccccttcactcccaaccttaaggtggacatgctgagtgagatcaatatt
gctccacggatcctcaccaattttactggtgtgatgccacctcagttcaagaaggatttg
gattcctatctcaaaactcgttctccggtcacgttcctctccgacctgcgcagcaacttg
caggtatcaaatgagcctggcaatcgttataatattcagctgatcaatgccctggtgctt
tatgtcggtacacaagcgattgcacacattcataacaagggcagcacgccatccatgagc
accatcactcattcagcccacatggacatcttccagaaccttgctgtcgatctggacaca
gaaggtcggtacctcttcctgaatgcgattgccaatcagttaaggtatcccaacagccac
acgcactacttcagctgcaccatgctttacttgtttgcagaagccaatacagaagctatt
caagagcagatcaccagggtcttgttagaacgactgattgtaaataggcctcatccctgg
ggtctcttaatcaccttcattgaattgattaaaaatccagcatttaaattctggaaccat
gagtttgttcactgtgctccagaaattgaaaaactgttccagtcagtcgcacagtgttgt
atggggcagaagcaggcacagcaagtaatggaaggaactggagccagctag
DBGET
integrated database retrieval system
