Protobothrops mucrosquamatus (Taiwan habu): 107284270
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Entry
107284270 CDS
T05763
Symbol
COL4A2
Name
(RefSeq) collagen alpha-2(IV) chain
KO
K06237
collagen type IV alpha
Organism
pmur
Protobothrops mucrosquamatus (Taiwan habu)
Pathway
pmur04382
Cornified envelope formation
pmur04510
Focal adhesion
pmur04512
ECM-receptor interaction
pmur04518
Integrin signaling
pmur04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pmur00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107284270 (COL4A2)
04518 Integrin signaling
107284270 (COL4A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107284270 (COL4A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
107284270 (COL4A2)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
107284270 (COL4A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmur04147
]
107284270 (COL4A2)
00536 Glycosaminoglycan binding proteins [BR:
pmur00536
]
107284270 (COL4A2)
Exosome [BR:
pmur04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
107284270 (COL4A2)
Glycosaminoglycan binding proteins [BR:
pmur00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107284270 (COL4A2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
107284270
NCBI-ProteinID:
XP_029139244
LinkDB
All DBs
Position
Unknown
AA seq
1682 aa
AA seq
DB search
MKSTPHFSLGCWTGQDMQIILLMVLTVLLPASVQAGGKSYTGPCAGRDCSGGCECFPEKG
ARGQPGLLGQQGFPGPSGVMGIPGLSGHKGDKGERGRPGITGPKGEVGQRGVTGFPGADG
VPGHPGQAGSRGKPGHDGCNGTKGDPGPQGIQGPAGTPGFFGIQGPKGQKGEPFALPEEL
AIQFRGNPGDPGLIGFIGPQGAPGPVGEPGLEGDSGLPGLPGPPGLPGPIGNRGLGFYGK
KGEKGEIGPPGPPGLPSTKELTSSIDEILSEHKGMKGEKGMMGEPGFPGFPAQRAEKGEE
GITGFPGQRGLPGINGLKGAEGDLGMPGNYGIQGIPGQKGVKGESGDKGIRGPPGHAQHP
TLIKGVPGDRGMDGIPGPEGERGAKGSPGPPGTEGSFDDVTVRRGFPGEMGPKGFTGDPG
FPALHPGPPGLDGEPGAPGFPGSPGHPGSPGYSIGLKGYPGVQGPAGKQGYPGPRGQNGL
KGDAGDCKCVEHIEGRRGPAGQPGPPGFQGPIGYAGEKGELGDQGYHGLPGFSGIKGFPG
VPGPSGPKGIKGDSQNVTTKGAKGDPGTPGIPGSPGEDGLPGRIGIDGFPGLPGLRGDGI
RGEQGDPGSEGQPGLKGFSGEIGLPGVGLPGPKGYRGPTGDPGTYGKPGFQGPPGPPGTA
AQTDCGQTEHRFLRDNRTESIHSGTSCVTTSKGTPGHPGLSGLPGAKGTKGIPGEPGLYG
SQGLKGLQGDQGHGGPAGPAGFTGPRGSRGAPGLPGERGLLGNPGLPGLPGLLGEKGLTG
DVLGVPPGSPGDTGPPGFPGAKGLQGDQGLPGIKGRDGFPGSPGSKGNPGFPGPTGPTGI
RGPPATFGFPGSPGQQGSLGRKGSQGFVGSPGVRGEPGEPGKVGPIGMKGLPGDKGELGF
IGTRGKAGETGLPGIVGMPGFPGLKGAKGSSGIGGFKGAMGFEGWPGQKGIQGDKGLTGK
QGAKGPSGDFGLKGERGIRGLPGAPPKIIPSIMLEVKGEKGDKGLFGVKGTIGLKGSKGF
LGLPGQTGISGLPGFPGFEKGQKGDTGNKGIRGAPGYAGIPGPRGIPGFPGITGWRGEKG
VPGVPGAIGESGQLGLIGDRGDAINLPGSKGSKGIPGIAGPPGFPGQIGEQGASGDPGFP
GSSGDKGSVGNIGLPGRKGVHGIRGLPGLDGLPGTKGLLGSPGPDGYGTSGFPGVLGEKG
TAGELSPIEGSRGPPGQKGQRGDPGWRGSTGTPGPDGRPGFPGVSNISGIPGDVGSPGFD
GVPGYPGLSGTPGTPGSVGFKGEEGLIGVAGEDGLKGIQGDQGQDGRPGISGLAGAKGYK
GEQGVMGFVGRTGISGDFGPIGPKGDRGPPGFQGPPGSPGLPPLLPKLVAEQGALGAHGK
IGPQGPAGEMGPHGPPGDPGFRGPIGKPGAQGRGGIAASPGFRGDQGGQGLHGPAGFEGA
AGVPGTPGLQGMPGRSVNIGYLLVKHSQSTQEPMCPEGMNQLWSGYSLLYFEGQDKAHNQ
DLGLAGSCLARFSTMPFLYCNPGDVCYYAGRNDKSYWLSTTASLPMMPVAEEEIRPYISR
CSVCEAPALAIAIHSQDITIPHCPEGWRSLWIGYSFLMHTAAGGEGGGQSLVSPGSCLED
FRATPFIECNGARGTCHYFANKYSFWLTTIDHQFQHSPSSDTLKAGLIRTHISRCQVCMK
NL
NT seq
5049 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagtactccacacttcagcttaggatgctggactgggcaggatatgcaaattatc
ctcctgatggtattgactgtgcttcttcctgccagcgtacaagctggaggaaagtcctat
actggaccatgtgcagggagagactgcagtgggggctgtgaatgtttcccagaaaaagga
gctcgtggccaaccaggactgcttggacagcaaggattccctgggccatcgggagtgatg
ggcataccaggactttcagggcacaaaggggacaaaggtgaacgaggtagacctggcata
actggacccaaaggagaagtgggacaaagaggagtcacagggtttcccggtgcagatgga
gttcctggtcacccaggtcaggcaggatcaagaggaaaaccaggccacgatggttgcaat
gggaccaagggagatccaggtccacagggaattcagggacctgcaggaactcccgggttt
tttggaatccagggacccaaaggtcagaagggggagccttttgcattacctgaagaatta
gctatacagttcaggggaaatcctggtgacccgggcttgattggcttcattggacctcaa
ggtgctcctggaccggtgggtgaacctggtctagaaggagactcaggtcttccgggactt
ccaggacccccaggactgccaggacccattggcaatagaggccttggcttttatggaaag
aaaggtgaaaagggtgaaattggacctcctggtccacctgggcttccatcaacaaaagaa
ttaaccagttcaatagatgaaattctaagtgaacacaagggtatgaaaggagaaaaagga
atgatgggagaacctggatttccaggttttcctgcacaaagagcagaaaagggagaagaa
ggaataactggctttccaggacaaagaggtttgccaggaatcaatggtctaaaaggagct
gaaggggatctgggtatgccaggaaattatggaatccagggcattcctggccagaaagga
gtgaagggtgaatctggggataaaggaattcgagggccaccaggtcatgcacaacatccc
acccttataaaaggtgtacctggtgaccggggaatggatggcattcctgggcctgaggga
gagagaggagccaaaggcagtcctggcccacctggtactgaaggatcatttgatgatgtt
actgtgcgaagaggttttcctggagaaatgggccccaaaggcttcactggcgatcctggc
ttcccagctcttcatcctggtcctcccggtttagatggtgaaccaggagcacctggcttc
cctggatctccaggccacccaggaagtccaggttattccattgggctgaagggctatcca
ggagttcaaggtcctgcaggcaagcaaggttatccaggtccacgaggacaaaatggactg
aaaggtgatgcaggagattgcaaatgtgttgaacatatcgaaggaagaaggggtcctgca
ggacaacctggtcctccaggatttcaaggtccaataggatatgctggggaaaaaggagaa
ttaggagaccaaggctaccatggacttccgggcttttctggtataaagggattccctggt
gtacctggaccatctggaccaaaagggataaaaggggattcccaaaatgttaccacaaaa
ggtgccaaaggagacccaggaactccaggaattcctggaagtccaggagaagatggttta
ccaggcaggattggcatagatggttttccagggcttcctggtcttcggggtgatggcata
agaggagaacaaggggaccctgggagtgaaggccaaccaggcctaaaaggtttttctggt
gaaattggtctgcctggtgtgggtttgcctggtccaaagggatatcgtggtcctacaggt
gaccctggcacatatggaaagcctggctttcaaggccctcctggcccgccaggcactgca
gctcagacagattgtgggcaaacagagcaccgctttcttagagataatagaacagaatca
attcattcagggaccagctgtgttaccacctcaaaaggaactccagggcatccaggactg
tctggactaccaggtgcaaagggtacaaaagggattcctggtgaacctggtttgtatgga
tcacaaggactgaaaggacttcaaggggatcaaggtcatggaggtccagcaggtccagca
ggattcactggacccagaggaagcagaggtgccccaggattgcctggagaaagggggctt
ctaggaaatcctggtttgccaggtttgccaggcctccttggggaaaaggggcttacaggt
gatgttctaggagtaccaccagggtctcctggggacactgggccacctggattcccagga
gcaaaaggtttgcaaggagatcaaggcttaccaggaattaaaggaagagacggcttccct
ggttcacctggatccaaagggaatcctgggtttcctgggcctactggcccgaccggtatc
cgaggaccaccagcaacatttggattccctggatccccaggccagcaagggtccctgggt
agaaaaggctcacaaggatttgttggatcacctggtgtcagaggggaacccggggagcca
gggaaagtgggtcctataggcatgaaaggtctgccaggggacaaaggtgaactaggcttc
attggaactagaggaaaggctggggaaactggtctccctggcattgtcggaatgcctggt
ttcccaggtcttaaaggtgctaaaggatcctctggcattggaggtttcaaaggtgctatg
gggttcgaaggatggccaggacagaagggaatccagggagacaaaggcctcactggaaag
caaggtgctaaaggaccatctggggacttcggattaaaaggtgaacgtggaattcgtggt
ctaccaggagcacctcctaaaatcataccaagcataatgctggaagtgaaaggtgaaaag
ggagataaaggattgtttggtgttaaagggactatcggtttaaaaggaagtaaagggttc
ctcggattacctggtcagacaggaatatcaggtttacctggatttcctggtttcgaaaaa
ggtcagaaaggtgacactggaaataaaggaataagaggtgctccaggatatgctggtatc
ccaggtcctcgtggtattcctggcttccctggaatcactggatggaggggagaaaaaggt
gttccaggagttccgggtgcgattggtgaaagtggccaactggggttaattggtgacaga
ggagatgctataaatttgccaggaagtaaaggttctaaaggaatccctggaattgctgga
ccaccaggattcccagggcagattggggaacaaggtgcatctggagatccaggtttccct
ggatcttctggtgacaaaggaagtgttggaaacattggccttccaggaagaaaaggtgtg
catgggatcagaggacttcctggattagatggtttgccaggtactaaaggcttgctagga
tcaccaggtccagatggatatggaacatcaggttttccaggtgttttgggtgagaagggt
acagcaggagagctgagccccattgaaggcagcagaggacctcctggtcagaaggggcaa
agaggggatccaggatggcgaggttccactggtacacctggaccagatggaagaccagga
tttcctggagtctccaatatatctggtatacctggcgatgtgggttcacctggttttgat
ggagtaccaggttaccccggactttcagggaccccaggaacacctggctcagttggtttc
aaaggagaagagggactaataggtgtggctggagaagatggtctaaaaggaatacaagga
gaccagggccaagatggaagacctggaatatcaggcttggctggagcaaaaggatataaa
ggtgaacaaggagtcatgggctttgttggccgaacaggaatttctggtgactttggtccc
ataggacctaaaggagatagagggccccctgggtttcagggacctccaggttcccccgga
ttgccacctttacttcctaaattggtcgctgagcaaggggcactaggcgcccatggaaaa
ataggcccccagggccctgcaggtgaaatgggtcctcacggtcccccaggagatccaggt
tttagaggcccgataggtaaaccaggagcacaaggaagaggaggtatagctgcatctcca
ggtttcagaggtgaccaaggaggacaagggctgcatggcccagcaggctttgaaggtgca
gcaggtgttcctggtactcctggactgcaaggtatgccgggccgcagtgttaacataggt
tatcttcttgtgaagcacagccaatctactcaagagccaatgtgtccagagggcatgaac
caactttggagcggctacagcttactgtactttgaaggacaagacaaagcacataaccag
gatcttggcctggctggatcatgtctggctcgattcagcactatgcctttcctttactgc
aatccaggggacgtctgctactatgcaggtcgtaatgacaaatcctactggctctcaacc
acagcctctcttccaatgatgcctgtggcagaagaagaaatcaggccttatatcagtcgc
tgttctgtctgtgaagctcctgctcttgccattgctattcacagtcaagatattactatc
cctcactgtcctgaaggatggcgcagtttatggattggttattctttccttatgcacact
gcagctggtggcgaaggaggaggacagtccctggtttctccgggtagctgcctggaagac
ttcagagccaccccattcattgaatgcaatggtgctcgggggacctgtcactactttgca
aacaaatacagtttttggcttaccaccattgaccatcaatttcaacactcaccttcttca
gatactctcaaggctggactcatccgaacacatataagcagatgccaagtgtgtatgaaa
aatttgtaa
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integrated database retrieval system
