Protobothrops mucrosquamatus (Taiwan habu): 107284270
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Entry
107284270 CDS
T05763
Symbol
COL4A2
Name
(RefSeq) collagen alpha-2(IV) chain
KO
K06237
collagen type IV alpha
Organism
pmur
Protobothrops mucrosquamatus (Taiwan habu)
Pathway
pmur04510
Focal adhesion
pmur04512
ECM-receptor interaction
pmur04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pmur00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107284270 (COL4A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107284270 (COL4A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
107284270 (COL4A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmur04147
]
107284270 (COL4A2)
00536 Glycosaminoglycan binding proteins [BR:
pmur00536
]
107284270 (COL4A2)
Exosome [BR:
pmur04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
107284270 (COL4A2)
Glycosaminoglycan binding proteins [BR:
pmur00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107284270 (COL4A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
107284270
NCBI-ProteinID:
XP_029139244
LinkDB
All DBs
Position
Unknown
AA seq
1682 aa
AA seq
DB search
MKSTPHFSLGCWTGQDMQIILLMVLTVLLPASVQAGGKSYTGPCAGRDCSGGCECFPEKG
ARGQPGLLGQQGFPGPSGVMGIPGLSGHKGDKGERGRPGITGPKGEVGQRGVTGFPGADG
VPGHPGQAGSRGKPGHDGCNGTKGDPGPQGIQGPAGTPGFFGIQGPKGQKGEPFALPEEL
AIQFRGNPGDPGLIGFIGPQGAPGPVGEPGLEGDSGLPGLPGPPGLPGPIGNRGLGFYGK
KGEKGEIGPPGPPGLPSTKELTSSIDEILSEHKGMKGEKGMMGEPGFPGFPAQRAEKGEE
GITGFPGQRGLPGINGLKGAEGDLGMPGNYGIQGIPGQKGVKGESGDKGIRGPPGHAQHP
TLIKGVPGDRGMDGIPGPEGERGAKGSPGPPGTEGSFDDVTVRRGFPGEMGPKGFTGDPG
FPALHPGPPGLDGEPGAPGFPGSPGHPGSPGYSIGLKGYPGVQGPAGKQGYPGPRGQNGL
KGDAGDCKCVEHIEGRRGPAGQPGPPGFQGPIGYAGEKGELGDQGYHGLPGFSGIKGFPG
VPGPSGPKGIKGDSQNVTTKGAKGDPGTPGIPGSPGEDGLPGRIGIDGFPGLPGLRGDGI
RGEQGDPGSEGQPGLKGFSGEIGLPGVGLPGPKGYRGPTGDPGTYGKPGFQGPPGPPGTA
AQTDCGQTEHRFLRDNRTESIHSGTSCVTTSKGTPGHPGLSGLPGAKGTKGIPGEPGLYG
SQGLKGLQGDQGHGGPAGPAGFTGPRGSRGAPGLPGERGLLGNPGLPGLPGLLGEKGLTG
DVLGVPPGSPGDTGPPGFPGAKGLQGDQGLPGIKGRDGFPGSPGSKGNPGFPGPTGPTGI
RGPPATFGFPGSPGQQGSLGRKGSQGFVGSPGVRGEPGEPGKVGPIGMKGLPGDKGELGF
IGTRGKAGETGLPGIVGMPGFPGLKGAKGSSGIGGFKGAMGFEGWPGQKGIQGDKGLTGK
QGAKGPSGDFGLKGERGIRGLPGAPPKIIPSIMLEVKGEKGDKGLFGVKGTIGLKGSKGF
LGLPGQTGISGLPGFPGFEKGQKGDTGNKGIRGAPGYAGIPGPRGIPGFPGITGWRGEKG
VPGVPGAIGESGQLGLIGDRGDAINLPGSKGSKGIPGIAGPPGFPGQIGEQGASGDPGFP
GSSGDKGSVGNIGLPGRKGVHGIRGLPGLDGLPGTKGLLGSPGPDGYGTSGFPGVLGEKG
TAGELSPIEGSRGPPGQKGQRGDPGWRGSTGTPGPDGRPGFPGVSNISGIPGDVGSPGFD
GVPGYPGLSGTPGTPGSVGFKGEEGLIGVAGEDGLKGIQGDQGQDGRPGISGLAGAKGYK
GEQGVMGFVGRTGISGDFGPIGPKGDRGPPGFQGPPGSPGLPPLLPKLVAEQGALGAHGK
IGPQGPAGEMGPHGPPGDPGFRGPIGKPGAQGRGGIAASPGFRGDQGGQGLHGPAGFEGA
AGVPGTPGLQGMPGRSVNIGYLLVKHSQSTQEPMCPEGMNQLWSGYSLLYFEGQDKAHNQ
DLGLAGSCLARFSTMPFLYCNPGDVCYYAGRNDKSYWLSTTASLPMMPVAEEEIRPYISR
CSVCEAPALAIAIHSQDITIPHCPEGWRSLWIGYSFLMHTAAGGEGGGQSLVSPGSCLED
FRATPFIECNGARGTCHYFANKYSFWLTTIDHQFQHSPSSDTLKAGLIRTHISRCQVCMK
NL
NT seq
5049 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagtactccacacttcagcttaggatgctggactgggcaggatatgcaaattatc
ctcctgatggtattgactgtgcttcttcctgccagcgtacaagctggaggaaagtcctat
actggaccatgtgcagggagagactgcagtgggggctgtgaatgtttcccagaaaaagga
gctcgtggccaaccaggactgcttggacagcaaggattccctgggccatcgggagtgatg
ggcataccaggactttcagggcacaaaggggacaaaggtgaacgaggtagacctggcata
actggacccaaaggagaagtgggacaaagaggagtcacagggtttcccggtgcagatgga
gttcctggtcacccaggtcaggcaggatcaagaggaaaaccaggccacgatggttgcaat
gggaccaagggagatccaggtccacagggaattcagggacctgcaggaactcccgggttt
tttggaatccagggacccaaaggtcagaagggggagccttttgcattacctgaagaatta
gctatacagttcaggggaaatcctggtgacccgggcttgattggcttcattggacctcaa
ggtgctcctggaccggtgggtgaacctggtctagaaggagactcaggtcttccgggactt
ccaggacccccaggactgccaggacccattggcaatagaggccttggcttttatggaaag
aaaggtgaaaagggtgaaattggacctcctggtccacctgggcttccatcaacaaaagaa
ttaaccagttcaatagatgaaattctaagtgaacacaagggtatgaaaggagaaaaagga
atgatgggagaacctggatttccaggttttcctgcacaaagagcagaaaagggagaagaa
ggaataactggctttccaggacaaagaggtttgccaggaatcaatggtctaaaaggagct
gaaggggatctgggtatgccaggaaattatggaatccagggcattcctggccagaaagga
gtgaagggtgaatctggggataaaggaattcgagggccaccaggtcatgcacaacatccc
acccttataaaaggtgtacctggtgaccggggaatggatggcattcctgggcctgaggga
gagagaggagccaaaggcagtcctggcccacctggtactgaaggatcatttgatgatgtt
actgtgcgaagaggttttcctggagaaatgggccccaaaggcttcactggcgatcctggc
ttcccagctcttcatcctggtcctcccggtttagatggtgaaccaggagcacctggcttc
cctggatctccaggccacccaggaagtccaggttattccattgggctgaagggctatcca
ggagttcaaggtcctgcaggcaagcaaggttatccaggtccacgaggacaaaatggactg
aaaggtgatgcaggagattgcaaatgtgttgaacatatcgaaggaagaaggggtcctgca
ggacaacctggtcctccaggatttcaaggtccaataggatatgctggggaaaaaggagaa
ttaggagaccaaggctaccatggacttccgggcttttctggtataaagggattccctggt
gtacctggaccatctggaccaaaagggataaaaggggattcccaaaatgttaccacaaaa
ggtgccaaaggagacccaggaactccaggaattcctggaagtccaggagaagatggttta
ccaggcaggattggcatagatggttttccagggcttcctggtcttcggggtgatggcata
agaggagaacaaggggaccctgggagtgaaggccaaccaggcctaaaaggtttttctggt
gaaattggtctgcctggtgtgggtttgcctggtccaaagggatatcgtggtcctacaggt
gaccctggcacatatggaaagcctggctttcaaggccctcctggcccgccaggcactgca
gctcagacagattgtgggcaaacagagcaccgctttcttagagataatagaacagaatca
attcattcagggaccagctgtgttaccacctcaaaaggaactccagggcatccaggactg
tctggactaccaggtgcaaagggtacaaaagggattcctggtgaacctggtttgtatgga
tcacaaggactgaaaggacttcaaggggatcaaggtcatggaggtccagcaggtccagca
ggattcactggacccagaggaagcagaggtgccccaggattgcctggagaaagggggctt
ctaggaaatcctggtttgccaggtttgccaggcctccttggggaaaaggggcttacaggt
gatgttctaggagtaccaccagggtctcctggggacactgggccacctggattcccagga
gcaaaaggtttgcaaggagatcaaggcttaccaggaattaaaggaagagacggcttccct
ggttcacctggatccaaagggaatcctgggtttcctgggcctactggcccgaccggtatc
cgaggaccaccagcaacatttggattccctggatccccaggccagcaagggtccctgggt
agaaaaggctcacaaggatttgttggatcacctggtgtcagaggggaacccggggagcca
gggaaagtgggtcctataggcatgaaaggtctgccaggggacaaaggtgaactaggcttc
attggaactagaggaaaggctggggaaactggtctccctggcattgtcggaatgcctggt
ttcccaggtcttaaaggtgctaaaggatcctctggcattggaggtttcaaaggtgctatg
gggttcgaaggatggccaggacagaagggaatccagggagacaaaggcctcactggaaag
caaggtgctaaaggaccatctggggacttcggattaaaaggtgaacgtggaattcgtggt
ctaccaggagcacctcctaaaatcataccaagcataatgctggaagtgaaaggtgaaaag
ggagataaaggattgtttggtgttaaagggactatcggtttaaaaggaagtaaagggttc
ctcggattacctggtcagacaggaatatcaggtttacctggatttcctggtttcgaaaaa
ggtcagaaaggtgacactggaaataaaggaataagaggtgctccaggatatgctggtatc
ccaggtcctcgtggtattcctggcttccctggaatcactggatggaggggagaaaaaggt
gttccaggagttccgggtgcgattggtgaaagtggccaactggggttaattggtgacaga
ggagatgctataaatttgccaggaagtaaaggttctaaaggaatccctggaattgctgga
ccaccaggattcccagggcagattggggaacaaggtgcatctggagatccaggtttccct
ggatcttctggtgacaaaggaagtgttggaaacattggccttccaggaagaaaaggtgtg
catgggatcagaggacttcctggattagatggtttgccaggtactaaaggcttgctagga
tcaccaggtccagatggatatggaacatcaggttttccaggtgttttgggtgagaagggt
acagcaggagagctgagccccattgaaggcagcagaggacctcctggtcagaaggggcaa
agaggggatccaggatggcgaggttccactggtacacctggaccagatggaagaccagga
tttcctggagtctccaatatatctggtatacctggcgatgtgggttcacctggttttgat
ggagtaccaggttaccccggactttcagggaccccaggaacacctggctcagttggtttc
aaaggagaagagggactaataggtgtggctggagaagatggtctaaaaggaatacaagga
gaccagggccaagatggaagacctggaatatcaggcttggctggagcaaaaggatataaa
ggtgaacaaggagtcatgggctttgttggccgaacaggaatttctggtgactttggtccc
ataggacctaaaggagatagagggccccctgggtttcagggacctccaggttcccccgga
ttgccacctttacttcctaaattggtcgctgagcaaggggcactaggcgcccatggaaaa
ataggcccccagggccctgcaggtgaaatgggtcctcacggtcccccaggagatccaggt
tttagaggcccgataggtaaaccaggagcacaaggaagaggaggtatagctgcatctcca
ggtttcagaggtgaccaaggaggacaagggctgcatggcccagcaggctttgaaggtgca
gcaggtgttcctggtactcctggactgcaaggtatgccgggccgcagtgttaacataggt
tatcttcttgtgaagcacagccaatctactcaagagccaatgtgtccagagggcatgaac
caactttggagcggctacagcttactgtactttgaaggacaagacaaagcacataaccag
gatcttggcctggctggatcatgtctggctcgattcagcactatgcctttcctttactgc
aatccaggggacgtctgctactatgcaggtcgtaatgacaaatcctactggctctcaacc
acagcctctcttccaatgatgcctgtggcagaagaagaaatcaggccttatatcagtcgc
tgttctgtctgtgaagctcctgctcttgccattgctattcacagtcaagatattactatc
cctcactgtcctgaaggatggcgcagtttatggattggttattctttccttatgcacact
gcagctggtggcgaaggaggaggacagtccctggtttctccgggtagctgcctggaagac
ttcagagccaccccattcattgaatgcaatggtgctcgggggacctgtcactactttgca
aacaaatacagtttttggcttaccaccattgaccatcaatttcaacactcaccttcttca
gatactctcaaggctggactcatccgaacacatataagcagatgccaagtgtgtatgaaa
aatttgtaa
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integrated database retrieval system
