KEGG   Protobothrops mucrosquamatus (Taiwan habu): 107284271
Entry
107284271         CDS       T05763                                 
Symbol
COL4A1
Name
(RefSeq) collagen alpha-1(IV) chain
  KO
K06237  collagen type IV alpha
Organism
pmur  Protobothrops mucrosquamatus (Taiwan habu)
Pathway
pmur04382  Cornified envelope formation
pmur04510  Focal adhesion
pmur04512  ECM-receptor interaction
pmur04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:pmur00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    107284271 (COL4A1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    107284271 (COL4A1)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    107284271 (COL4A1)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    107284271 (COL4A1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pmur04147]
    107284271 (COL4A1)
   00536 Glycosaminoglycan binding proteins [BR:pmur00536]
    107284271 (COL4A1)
Exosome [BR:pmur04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   107284271 (COL4A1)
Glycosaminoglycan binding proteins [BR:pmur00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   107284271 (COL4A1)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 107284271
NCBI-ProteinID: XP_029139245
LinkDB
Position
Unknown
AA seq 1439 aa
MGLNFQGPKGDKGEHGVMGPPGPQGVDTWHEEKGTIIIQGDKGDPGEKGEDGLPGPPGQS
IKEEKGEPGKPGPRGRPGKDGEDGEKGERGVPGQPGIPGHPGILGPKGDKGVTGPPGPPG
IVMGEEEEEVFGEKGDPGPHGFPGRKGELGPKGSQGSPGLPGPPGQAIPGSPGFPGERGR
KGDQGPPGTSLPGPKGRDGFTGSRGLPGPPGPPGGTDGIGCERGSPGDPGLQGIPGQSGY
TGERGEKGEKGEGCLECDGAGFPGSPGPQGLQGEPGIPGPPGAKGDRGLPGFEGIPGMAG
PPGVPGETGISGPKGEPGDIFYDSIVKGEKGLPGLPGQAGIPGKEGRPGKDGVPGIPGPK
GASGTIGLKGDRGLPGISGLPGSPGDRGFPGLPGVGSSGPHGDKGEKGLSGIPGTPGLPG
PKGEAGHVISLPGPPGARGFPGSAGNPGLRGDKGDPGIPGRPGLPGEKGLAGPPGIGFPG
PSGAPGFPGQPGPQGSRGEKGESGSQGAPGAAGAKGQKGEAGLGLPGSKGFPGPQGRDGI
PGLKGDQGYPGVPGDKGLPGVPGQPGSQGELGPPGLPGVRGSPGEPQMGSPGPPGPPGQF
GPPGPLGPPGIKGERGHPGIPGLDMPGLKGDKGSPGTQGLSGVPGLPGLPGLQGQQGHPG
VPGLKGEMGIMGTPGIQGPSGPIGTPGTPGEKGSLGFPGVAGQRGDPGLKGEKGEAGLPG
EPGSMEHVDMENLKGQKGEQGDKGIKGVIGEKGSAGNYGSPGMPGKDGDPGLPGQPGSKG
DSGTPGFQGEQGFPGEKGSMGEMGLPGLPGEKGFQGLSGETGQSGSPGVKGEKGQKGNAG
LPGIGFPGTSGEKGQQGWPGSSGLPGEKGEKGIPGISGIPGFPGIKGQPGLPGSPGVIGL
SGEKGQKGTPGLSGFPGLKGQPGDPGAQGSQGTAGEKGEPGYDGIPGTPGSKGDSGPKGD
VGSPGSPGSPGVPGIKGDIGFVGPQGPPGQPGIPGLPGKIGEGPKGDRGPQGQPGLQGLP
GPQGSVGVSGLSGEKGEKGSSGWPGQPGRPGPKGDLGVQGIPGNPGFPGTSGQKGDMGPS
GIPGPQGLKGSSGFPGSKGVQGDQGFSGTKGLPGPPGPPGPFQLQKGEPGLPGLLGPAGP
KGFPGSPGPKGQQGVIGAAGLTGPPGIPGFDGTPGQKGERGPVGPPGPRGFPGSPGPEGV
PGTMGPPGSPSVAHGFLVTRHSQTTEEPSCPFGTRLMFYGYSLLYVQGNQRAHGQDLGSA
GSCLRKFSTMPFLFCNINNVCNFASRNDYSYWLSTPEPMPMSMAPLIGESIRPFISRCAV
CEAPSMVIAIHSQTVQIPPCPEGWNSLWIGYSFVMHTSAGAEGSGQALASPGSCLEEFRS
APFIECHGKGTCNYYANAYSFWLATIERNEMFKKPTSSTLKAGELHSNVSRCQVCMKRT
NT seq 4320 nt   +upstreamnt  +downstreamnt
atgggcttgaatttccaaggtccaaaaggggataagggtgagcatggtgtcatgggccct
cctggtccccaaggagtagatacatggcatgaagagaaagggaccatcatcatacaggga
gacaaaggtgatcctggtgaaaaaggtgaagatggattaccagggccaccaggccagagc
atcaaagaggaaaaaggggaacctgggaaacctggtccacggggaaggcctggaaaagat
ggagaggatggagagaagggagaacgtggagtacctggtcagccaggaattcctggacat
cctggtatacttggacctaaaggagacaagggtgtaacaggacctcctggacctccagga
attgttatgggtgaagaagaagaagaagtgtttggtgaaaagggtgacccaggacctcat
gggtttccaggaaggaaaggtgaactaggtcccaaaggttctcaaggtagtccagggtta
ccaggtcccccagggcaagctattccaggatcacctggttttcctggtgaaagagggaga
aaaggtgaccaggggcctcctggaacatctttgcctgggccaaaaggaagagatggattt
acaggatctcgtggtttacccgggcctccaggcccacctggtggaacagatggaattggg
tgtgaacgtggttcacctggtgacccaggtcttcaaggcatcccaggacagtcaggctac
acaggagaaagaggagaaaaaggtgaaaaaggcgaaggctgcttggagtgtgatggagca
ggttttcctggatcaccagggccccagggccttcaaggggaaccaggcattccaggacca
cccggtgctaaaggtgatagagggcttcctggatttgaaggcattccaggcatggcagga
cctcctggtgtacctggtgagacaggaatctcaggaccaaaaggagaacctggagatatt
ttctatgactccattgtaaaaggtgaaaaaggattaccaggattacctggacaagcgggt
attcctggcaaagaaggaaggccaggaaaggatggtgtccctggcatcccaggacctaaa
ggagcatctggaaccattggattaaaaggagatcgtggactcccaggaataagtggttta
ccagggtcccctggagacagaggtttccctggacttccaggagttgggagttctggacca
cacggtgataaaggagaaaaggggctttctggaatccctgggacccctggacttccaggt
cccaaaggtgaagctggacatgtcatttctctgcctggtcccccaggggccagaggtttt
cctggatctgctggaaatccaggtctccgaggtgacaagggagacccagggatcccagga
agacctggtctgccaggtgaaaaaggtctggcagggcctccaggaattggatttcctggc
ccttcgggggccccaggttttcctggtcagccaggtccacaaggttcaagaggagagaag
ggagaatctggttcccaaggtgcgccaggtgcagctggagccaaaggacagaagggtgaa
gctggattaggtctcccaggttctaaaggctttcctggtccccaaggacgagatggtatt
cctggattaaaaggtgaccagggatatcctggtgtgccaggggacaaaggacttcctggc
gtacccggtcagccaggatctcaaggtgaactgggtcctcctggattaccaggtgtacgg
ggctctcctggtgaaccccaaatgggctctcctggcccccctggccctccaggacaattt
gggcctccaggaccactaggaccaccaggaatcaaaggggagagaggccacccgggtatc
cctgggttggatatgccggggcttaaaggagataaaggtagcccaggaacacaggggctg
tcaggtgtgccagggttgccaggcttacctggcttacagggacaacaaggacatccaggt
gttccaggactgaaaggagaaatgggaattatgggtacccctggaattcaaggtccatct
ggtcctataggaactcctggaactccaggtgaaaaaggtagcctaggttttcctggagtg
gcaggacaaagaggtgatccaggtttaaaaggtgaaaaaggtgaagctggactcccaggg
gagccaggatcaatggagcatgttgacatggaaaatctgaaaggccaaaaaggagaacaa
ggagataaaggaataaagggggtaataggagaaaaaggatctgcaggaaattatggcagc
ccaggaatgccaggcaaggatggagatcctggtttaccaggccaaccaggatcaaaagga
gattcaggcactccaggattccagggtgaacaaggatttcccggagaaaaaggatcaatg
ggtgaaatgggtttaccagggcttcctggagaaaaagggtttcaaggcctttcaggtgag
acaggtcagtcaggatctcctggagttaaaggtgaaaaaggacagaaaggaaatgcagga
cttcctggaatcggcttccctggaacttctggtgagaagggtcaacaaggatggccgggc
agctcaggcttaccaggagagaaaggtgaaaagggtattccaggtatttcaggcatccct
ggattcccaggcatcaaagggcagcctggccttccaggttctccaggtgttataggactg
tcaggtgaaaaaggacagaaaggaaccccaggcttgagtggttttccaggcttaaaagga
caaccaggtgaccctggagcacagggttcacagggaactgctggagaaaaaggtgagcca
ggttatgacggaatcccaggcactcctggttcaaaaggtgattcaggtcctaaaggagac
gtgggctctccagggagtcctgggagtccaggagttcctggcataaagggagacattgga
tttgttggcccacaaggtcccccaggccaaccaggcattcctgggttaccagggaagatt
ggtgagggacccaagggtgaccgggggccccaagggcaaccggggcttcaagggcttcct
gggcctcaaggatctgtaggagtttcaggattatcaggagaaaaaggagaaaaaggaagt
tcaggttggccagggcaacctgggagacctggacccaaaggtgatctgggagttcaagga
atccctggcaatcctggtttccctggaacttctggtcagaaaggtgacatgggaccttct
ggaattccagggccccaaggtctaaaaggttcttcaggtttccctggatccaagggagta
caaggtgaccaagggttttctggaactaaaggtctgccaggcccgccaggtcctccaggc
ccttttcaacttcagaaaggtgaaccaggcctacctggtcttttaggccctgctggcccc
aaaggatttcctggttctccaggaccgaaagggcaacaaggtgtaataggagctgcgggt
ttgactggccccccaggaataccaggttttgatggcacacctggtcagaaaggagaaagg
ggccctgtgggtcctccaggtccgagaggctttcctggttcacctggtcctgaaggcgtg
ccagggacgatgggtccaccgggcagtccctctgtggctcatggtttccttgtgaccagg
cacagccaaaccacagaggagccctcctgcccatttgggacaagactcatgttctatgga
tattctttgctttatgtacaaggcaatcaacgggcccacggtcaggacttgggctctgct
ggaagctgtctacgtaaattcagcacaatgcctttcctattctgcaatattaacaatgtc
tgcaattttgcttcaagaaacgattattcttattggttgtccaccccagagcccatgcca
atgagcatggctcctctaataggagaaagcatcaggcctttcatcagcaggtgtgctgtg
tgtgaagctccttctatggtgatagcaatccacagccaaacagttcaaatcccaccatgt
ccagaaggctggaactctctgtggatcggttactcctttgtgatgcacaccagtgcaggg
gcagaaggctccgggcaagcactggcctctccgggctcctgccttgaagagttccgcagt
gcacccttcattgaatgccatggaaagggcacctgcaattattatgccaatgcctacagc
ttctggcttgccactattgagaggaatgaaatgttcaaaaaacctacgtcttccacactg
aaggccggagaattgcattcaaatgttagccgctgccaagtctgtatgaagagaacataa

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