Protobothrops mucrosquamatus (Taiwan habu): 107284435
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Entry
107284435 CDS
T05763
Symbol
TRIM71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
pmur
Protobothrops mucrosquamatus (Taiwan habu)
Brite
KEGG Orthology (KO) [BR:
pmur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmur03019
]
107284435 (TRIM71)
04121 Ubiquitin system [BR:
pmur04121
]
107284435 (TRIM71)
Enzymes [BR:
pmur01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107284435 (TRIM71)
Messenger RNA biogenesis [BR:
pmur03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107284435 (TRIM71)
Ubiquitin system [BR:
pmur04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
107284435 (TRIM71)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
zf-B_box
SGL
ANCHR-like_BBOX
zf-RING_5
zf-RING_UBOX
zf-C3HC4
zf-RING_2
Trypan_PARP
PspA_IM30
Motif
Other DBs
NCBI-GeneID:
107284435
NCBI-ProteinID:
XP_015668016
LinkDB
All DBs
Position
Unknown
AA seq
888 aa
AA seq
DB search
MASFPESDFQICPLCKEMCGSPAPVSSNSSTSSSSSQTSNSSGGGSGGSSSCTPSRRLHV
LPCLHAFCRQCLEAQRHPTAGDSLKLRCPICDQKVVISEPSGMDALPSSNFLLSNLLDVV
VVAAAAEDQKNNGRPGGGSGQGGGSGGGAASNSNANNRHPHPRQQPAQQQQQHRAPAGGS
SPGSAAGSAPSGGGGGSALLLRRPHSRQGEPRCSSCDEGNAASSRCLDCQEHLCDNCVRA
HQRVRLTKDHFIERFGPGPPASAGTGPASAASQLALSPPYSAAPYNILSVFPERVNYCQH
HDDEVLHFYCDACSVPICRECTMGRHVGHSFIYLQEALQDSRTLTIQLLADAQQGRQTIQ
LSIEQAQAVAEQVEMKAKMVQSEVKAVTSRHKKALEERECELLWKVEKIRQVKAKSLYLQ
VEKLRQNLNKLDNTISAVQQVLEEGRNMDILLARDRMLAQMQEMKNVRGFLQPQEDDRVM
FTPPDQALYLAIKSMGFVSSGAFAPLTKATGEGIKRALQGKIASFSVIGYDHDGEPRLSG
GDMISAVVMGPDGNLFGADICDQQTGTYLVNYRPQMEGEHLISVMMCNQHIESSPFKVMV
KSGRSYVGIGLPGLCFASEGDSDGKLCRPWGVSVDKEGYIIVADRSNNRIQIFKPCGAFH
YKFGTLGSRPGQFDRPAGVACDSSRRIVVADKDNHRIQIFTFDGQFILKFGEKGTKNGQF
NYPWDVAVNCEGKILVSDTRNHRVQLFGPDGVFLNKYGFEGALWKHFDSPRGVTFNHEGH
LVVTDFNNHRLLVIHPDCQSARFLGSEGTNNGQFLRPQGVAVDQEGRIIVADSRNHRVQI
FEPNGSFLCKFGTQGSGFGQMDRPSGITITPDGLIVVVDFGNNRILIF
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgttccccgagtcggatttccagatttgtccgctgtgtaaggagatgtgcggc
tcgccggctccagtctcctctaattcgtccacttcgtcgtcctcttctcagacttcaaac
tcttccggaggcggcagcggggggtcttcatcctgcaccccgtcgaggcggctccacgtc
ttgccctgcctgcacgctttctgccgccagtgcctggaagcgcagcgccacccaaccgcg
ggcgactctctcaagctgcgctgccccatctgtgaccagaaggtggtgatctcggagccg
tcgggcatggacgcgctgccctcctccaactttcttctcagcaacctgctcgacgtggtc
gtcgtggccgccgccgccgaagaccagaagaacaacggccgtccgggcggcggcagcggg
caaggaggaggcagcggcggcggagcggcaagtaacagcaatgccaacaaccgacaccct
catccccgccaacagcctgcccagcagcaacagcagcaccgcgcccctgcgggcggctcc
tccccgggctctgccgccggctcggcgccgtccgggggaggcgggggctccgcgttgctg
cttaggcggccccacagccgacagggtgagccccgctgcagctcgtgcgacgaaggcaac
gccgccagctcccgctgcctcgactgtcaggagcacctgtgcgacaactgcgtgcgcgcc
caccagcgcgttcgcctcacgaaggaccactttatcgagcgctttggcccagggccgcca
gcctcggcgggaaccggccccgcctcggcagcctcccagcttgctctcagcccgccctat
tccgccgcgccttacaacattctctccgtcttcccggagcgagtcaactattgccagcac
cacgacgacgaggtgctgcatttctactgtgatgcttgttctgttcccatttgtcgggaa
tgcaccatgggacgccatgtcggccatagctttatctacctccaagaagctttgcaagac
tccagaacccttactattcagctgctagcagatgcacaacagggtcgccaaactattcag
ctgagtattgagcaagcccaagctgtagcagaacaagttgaaatgaaggcaaaaatggta
caatctgaagtgaaggctgtgacttccagacacaagaaggctttagaagaaagagaatgt
gagctgctgtggaaggtggaaaaaatccgccaagtgaaagccaagtccctctacttgcaa
gttgagaaattacgtcaaaatctcaataagctagataacaccatcagcgcagtccagcaa
gtcttagaagagggccggaacatggatatcctcttggcacgggatcggatgcttgcacag
atgcaggaaatgaagaatgtaagaggcttcctgcagcctcaagaggatgacagggtcatg
tttactcctcctgatcaggcactgtatttggccattaagtctatggggtttgtcagcagt
ggggcctttgctcctctgaccaaagccactggggagggtatcaaacgtgcattgcaaggc
aaaatagcctctttttcagtgataggttatgatcatgatggtgagcctcgcctttctggg
ggagacatgatttcagctgttgtaatggggccagatggaaatctctttggtgctgatatt
tgtgaccagcagactggaacttatctggtaaattacaggccacagatggaaggggaacat
cttatctcagtcatgatgtgcaaccagcatatagaaagcagcccatttaaagtcatggtc
aaatcaggacgcagttatgttggcattggactgccggggctctgttttgctagtgagggg
gatagtgatggaaagctgtgccgcccctggggtgttagtgtagacaaggaaggctatatc
attgttgctgatcgtagcaacaaccgaattcagatctttaaaccttgtggggcttttcac
tacaagtttggcaccttgggctccagacctggccagtttgataggcctgctggtgttgcc
tgtgactcctctcgaaggattgttgtggcagacaaggacaatcatcgcatccagatcttt
acttttgatggccagttcattctcaagtttggggagaagggaaccaagaatgggcagttc
aattatccatgggatgtagcagttaactgtgaggggaaaatcctggtgtccgacacaagg
aatcatcgggttcaattgtttggacctgatggagtgttcctgaataaatatggttttgaa
ggggcactctggaagcactttgattccccacgaggtgtgacattcaatcacgagggccat
cttgtcgtgactgatttcaacaatcatcgtcttctagtcattcatcctgactgtcagtca
gcccgtttccttgggtccgaaggcacaaataatggccagtttttgcgcccacaaggtgtg
gctgtagatcaggaaggtcgtattattgtggcagattccagaaaccatcgggtacagatc
tttgagccgaatggtagttttttatgcaaatttggcactcagggaagtggctttggtcag
atggaccgtccttcaggtattaccatcaccccagatggcttgatagttgtggtggacttt
ggaaacaatcgaattctcatattctaa
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