Protobothrops mucrosquamatus (Taiwan habu): 107284681
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Entry
107284681 CDS
T05763
Symbol
PDCD11
Name
(RefSeq) protein RRP5 homolog
KO
K14792
rRNA biogenesis protein RRP5
Organism
pmur
Protobothrops mucrosquamatus (Taiwan habu)
Brite
KEGG Orthology (KO) [BR:
pmur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmur03009
]
107284681 (PDCD11)
Ribosome biogenesis [BR:
pmur03009
]
Eukaryotic type
90S particles
Other 90S particles
107284681 (PDCD11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1_RRP5
S1
Spt6_S1
HAT_Syf1_CNRKL1_N
Suf
OB_RRP5
HAT_PRP39_C
HAT_PRP39_N
TPR_14
HAT_Syf1_CNRKL1_C
OB_RRP5_4th
ARM_TT21
ARM_TT21_5th
HAT_Syf1_M
Motif
Other DBs
NCBI-GeneID:
107284681
NCBI-ProteinID:
XP_015668266
LinkDB
All DBs
Position
Unknown
AA seq
1369 aa
AA seq
DB search
HIINAPFLRYHDLHPGQVLEGIVLTLKPLGMQVKVTESIKGFVPNLHLADVKLKQPEKKY
STGTTVKCRVLASDPETKKLILTLKRTLVNSKLPVLASFEDAKPGLITHGFIACVKEFGC
IVKFYNDVRGLVPTNELGLLPLTVPQEAFYEGQVVKVTVLKCEPEQERLLLSFRLAEDAI
SKNAGRTETSKNHEMVYETGQIVDVKILNKKEDGLQVAILPNNVSAYLPTAQLSDHVSNS
KLWWHWLKEGDVLQKAICLHNKGGHIILSRKPALISSMEDEHLAKSFVDIQPGLLLTGFV
RNIMSYGVFVEFPYGLTGLAPKSAMSDKFVTDTKDHFVVGQTVLAKVTSVDEEKQRILLS
LKISECSVQGSVSESFALLQQYFNELQEIMSFMSNRDDSNVAKKLSKLKVGQRLELVVTE
VKADGSAVFSGPHVSDLTVIANYSQLGGRSILGGQKVKAVIICIDLLTSKIYVSLQEELL
SLKSKKLILNSQYEAVVHHVATEYAVVSLLGTGRLIAIPVASHLNDTFRFDSEKLKMGQS
VKVVLKSTQIGDHGMLFAVHDSGKKKNVIRSRRESETLENTSLVTKQLPSSGDIVNGIVK
SVKPTHVLVAFNGRLTGSIHASQILDDVIVGTFPTSLLKVGQKITARVIGGRDIKSHKYL
PITHTHFTHTFLELSIRPSELKKESKAALNAENDSPEETPKSGHTVACYVKKYNVLKKRL
EVEVTSTIRGRVPQLLLFSNPKDIKHATKCFKKGQALTATVTDCDISGTKLSLSLTGIHS
LEKGTITLCTVKRVIPHVGLHIILPFGRIGKISLFQLNDSYTEQPLEDFSIGKILRCYIL
SVEDNAVKVSLRPSRINPKGRHKVEDPEIVSLDNIQNGQLIRGYVKSITASGISLGLSDS
VVGQISLQYVTPPCMKYIRIDQLLTAKVLSINREENLVELSLLPEDTGKPNIIPCDEKPC
GEKDTPSQKSRNQRRKFSESEQEVTPAKKRAYCTEDGDSGVEVYYREEEEKEKKHEKKPK
LGKEVPRLKVSTSFMWEEGLNVLDGTTLIPTEHSSDSEEENDAESMAKKQTKKKQELEKQ
KAEKELSKLEAALMDPKRQPQTADDFDRLVLSNPDSSILWLQFMAFHLQATEIEKARAVA
ERALKTISFREEQEKLNVWVALLNLENMYGTEEGLMKVFERAVQYNEPLKVFQQLADIYS
ASEKHKEADDLYNTMLKRFRQERSVWVKYTTFLLKRGLMEAAHRLMPRALKCLPDKEHVD
VISKLAQLEFQFGDAEHGKTLFENTLSTYPKRTDIWSVYIDVMIKHGSQKEIRDIFERVI
HLNLTAKKMKFFFKRYLEYEKKYGTVETIQAVKAAALEYVQSKNSLAES
NT seq
4111 nt
NT seq
+upstream
nt +downstream
nt
acatattattaatgctccatttctgagataccatgatttacatcctgggcaagtgctaga
aggaatagtgttgactctgaagccgttgggcatgcaggtgaaggtcactgagagtatcaa
aggctttgtccccaatttacatcttgcagatgtgaaattgaaacagccagagaagaagta
tagcacggggactactgttaagtgtcgggtacttgcctccgatcctgaaacaaagaagct
tattctgactctcaagagaacccttgttaattccaagctccctgtccttgccagttttga
agatgccaagccaggcctgatcactcatggttttattgcgtgtgttaaggaatttggctg
cattgtgaaattctataatgatgtgaggggcttagtacctactaatgaacttggtttgct
ccccttaactgttcctcaagaagccttctatgaaggccaggtagtcaaagtgactgtatt
aaaatgtgagcctgagcaggaaagattgttgctttcattcagattggcagaggatgctat
ttcaaagaacgctggaagaacagaaacttcaaagaaccatgaaatggtatatgaaactgg
acagattgtagatgtaaaaattctgaacaagaaagaagatggcctacaagttgcaatcct
acccaacaatgtttcggcctaccttcccacggcacaactttctgatcacgtgtccaatag
caagttgtggtggcattggctcaaggaaggtgatgttctccaaaaggctatatgcctcca
taacaaaggaggtcacattatcttgagtagaaaaccggcgttgatttcctctatggagga
tgaacatttagcgaagagttttgttgatatccagcctggattactgcttactggcttcgt
aagaaacatcatgtcttatggtgtatttgtggagtttccttatggtttgacggggctggc
ccccaaatcggcaatgagtgacaagtttgtgacagacaccaaagaccattttgtggtagg
tcaaactgtacttgccaaggtgaccagtgttgatgaggagaagcagcgcatcttgctgtc
cctgaagatatcagagtgctctgttcaggggtctgtttctgagagctttgccctactgca
acagtactttaatgaactgcaggagattatgagcttcatgagcaatagagatgattccaa
tgtggctaagaaactctccaaattaaaagtggggcagaggctagaactggttgttactga
agttaaggctgatggttcagcagttttcagtggtccacatgtttctgatttgactgtaat
tgccaattacagccaacttggaggcagaagtattcttggcggtcaaaaagtaaaagctgt
aattatctgtattgatcttctaacatcaaagatctatgtatctcttcaagaggaactgct
gtctctcaaatccaagaagttaatcctgaattctcagtatgaggctgttgtacaccatgt
ggccacagagtatgcagttgtttccttgttaggaacaggtcggctgattgcaatcccagt
ggcttcccacttgaatgacacattccgatttgattctgaaaaactgaagatgggacagtc
agtcaaagtggttctgaaaagcacacagattggtgatcatgggatgttatttgctgtaca
tgattcagggaagaagaagaatgtaatcagatcacgtcgtgaatcagagacactagagaa
tacctcacttgtaacaaaacagttgccaagctcaggagacatagtcaatggaattgttaa
gtctgtcaaacccactcatgtcttagtggcatttaatggtaggttgactggctccattca
tgcatcccagatcctggatgatgttattgtaggcacttttccaacatcattactaaaagt
tggacagaagattactgctcgggtgattggaggcagagacattaaaagtcacaaatatct
gcccatcacccacacccacttcacccatacattcctagagctcagtatccgaccaagtga
actgaaaaaggaaagtaaagcagccttgaatgctgaaaatgacagcccagaagaaacacc
gaaatcgggccacacagtggcatgctatgttaagaagtacaatgtattaaagaaacggct
ggaggtggaggtcacttctaccatcagagggagagtcccacagctgctgcttttttcaaa
tcccaaggatataaaacatgcaacgaaatgcttcaaaaaaggacaggccttgactgcaac
agtgacagattgtgatatttctggaaccaaactctctctgtcactaacaggcattcattc
attggagaaaggaacaattacactttgcactgtgaaacgagttattccacatgttggttt
gcatattatccttccctttggaaggattggtaaaatcagtcttttccagctaaatgattc
atacacagagcagccacttgaagacttcagtattggaaaaattctcagatgttatattct
ttctgttgaagacaatgcagtaaaagtatccctccggccatccaggataaatcctaaagg
ccgtcataaagttgaagatcctgaaattgtttcccttgataacattcagaatggtcaact
catcagaggttatgtcaaatccattacagcatcaggcatctctttggggttatcagattc
agtggtgggtcaaatttcccttcagtatgtcaccccaccctgtatgaagtacatacgtat
agaccagcttctcactgccaaagttctcagtataaacagagaagaaaaccttgtggagct
ctctctccttcccgaagacacagggaagccaaacattattccatgtgatgaaaagccgtg
tggtgaaaaggatacaccctcccagaaatcaagaaatcaaaggaggaagttttctgaaag
cgagcaggaggtaacgccagcgaaaaagagagcttattgcactgaggacggtgatagtgg
tgttgaggtttattatcgggaggaagaggagaaggaaaagaagcatgagaagaagcctaa
gctgggaaaagaagttccaagactgaaggtttcaaccagctttatgtgggaggagggctt
aaatgtgttggatggaaccacgttgattccaacggagcacagctcagacagcgaagaaga
aaatgatgctgaatccatggccaaaaaacaaacaaaaaagaaacaggagctggagaagca
aaaggcagagaaggaactctccaagctggaagctgccctgatggatcccaagcgacagcc
gcagacagcggatgactttgaccgcttggtcctcagcaatcctgacagctccatcctttg
gttgcaattcatggcttttcatctccaagctacagagatagaaaaagccagagctgttgc
agaaagggcactaaaaacaatctcctttagagaggaacaagaaaagctaaatgtgtgggt
tgctttgctaaacctggagaacatgtatggcacagaggaaggactgatgaaagtttttga
aagagcagtccagtacaatgagcctctgaaggtatttcagcagttggcagacatctacag
cgcctctgagaaacataaggaagctgatgacctatacaacacaatgctgaaacgcttccg
tcaagaaagatctgtttgggtaaagtataccacttttcttctgaaacgtggtttgatgga
ggcagctcacagacttatgccacgggcactgaaatgcttgccagacaaagagcatgtgga
tgtgatttcaaagctggcacagttagagtttcagtttggtgatgcagaacatggcaagac
cctgtttgaaaacaccctgagcacataccccaaacgtacagacatctggtcagtgtacat
agatgtaatgataaaacatggcagccaaaaagaaatccgggatatttttgaaagagtgat
tcacctaaacttaacagcaaagaagatgaagtttttctttaaacgctatctggagtatga
gaagaagtatggcactgtggaaacaatccaggctgtgaaggcagcagcattggagtatgt
gcaatccaagaacagtcttgctgagagctaa
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