Protobothrops mucrosquamatus (Taiwan habu): 107285033
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Entry
107285033 CDS
T05763
Symbol
TRIM56
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM56
KO
K12026
tripartite motif-containing protein 56 [EC:
2.3.2.27
]
Organism
pmur
Protobothrops mucrosquamatus (Taiwan habu)
Brite
KEGG Orthology (KO) [BR:
pmur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmur04121
]
107285033 (TRIM56)
Enzymes [BR:
pmur01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107285033 (TRIM56)
Ubiquitin system [BR:
pmur04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
107285033 (TRIM56)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-B_box
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-RING_2
zf-C3HC4_2
zf-RING_5
RING_XB3-XBAT31
ANCHR-like_BBOX
Phytase-like
Motif
Other DBs
NCBI-GeneID:
107285033
NCBI-ProteinID:
XP_015668659
LinkDB
All DBs
Position
Unknown
AA seq
687 aa
AA seq
DB search
MAARASSLWETLSSGFLTCTICLQHYCQPKILPCLHSYCQDCLKKLLGGSKRELQCPECR
EVVPLPAGVEGLKTNFFINGLLDLVPPVEEAKATCSLCPLIGQDASSVAVSHCIDCADHL
CQACARGHRCSRLTHGHLLVDMEAYCSGKYNEEVRKRQASRCKEHKDEDLQYFCVTCAAA
LCRECRLGPHLEHPCLPLSEAAKARRPILTGLLGGVEEKMHLLTKAKVNLEKERQEMEAW
NVNIRSVVEQTCAKAVEQLLSHKEKVLGQLSGYLEERKEASRLLLSELGFQEQVASTTVA
FARKVLNLGQAVEIVSLEQMISERLRQLQSFSWEPLALQVPKLHIQPDLLYGCNLFLLEF
HEKATTTTPECSMGDSTQWSKKKKKQKQQQRPQGAEEGEASRQERAPSGESLGPAEVGPE
VPRLIPKPVFFCSFWVKVPTDKKRPQVTGLFPFGSSEILVADEENKKLKRFSLQGEFKGT
IPVPSNVAPFSVAAVGNKAVFTAGSQLYVLNETGGIMWQKALKGGQASHAVTTCDGNSVV
VSVAGHLEVFNLKGQLLEKIVPEASHERCLVFLGRWKKGFVASDWYRHSVVLLDRNGDLV
TEYQEEQLSGSQPGSVCADAPGIVYVVLRELNKIVAFSEAGEELGSFLTTENSVFKPRVI
TIAGDGHFVVALTNGTIHVFKIKYQGE
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggctgccagagcatcctccctctgggagaccctctccagcggcttcttgacttgcacc
atttgcttgcagcactattgccagcccaaaatcctaccctgcctccacagctactgccag
gactgtctgaagaagctgctgggtgggtcaaagcgggagctgcagtgccctgaatgccgc
gaggtggtgcctctcccagccggcgttgaaggtttgaagaccaacttcttcatcaacggc
ctcctggacttggtgcctccggtcgaggaggccaaggccacctgcagcctgtgcccgctc
attggccaagatgccagctctgtcgctgtgtctcactgcatcgattgtgccgaccacctg
tgtcaggcctgtgcccgcgggcaccgttgctcccgccttacccacggccacctcctggta
gacatggaggcttactgctctgggaagtacaacgaggaggtccggaagcgtcaggcctca
cgctgcaaagagcacaaggatgaagacctgcagtatttctgcgtcacctgtgctgctgcc
ctctgccgggagtgccgtctgggtcctcacctggagcacccgtgcctgcccctgtcggag
gccgccaaagcccgccgccccatcctcacaggcctcttgggtggggtggaggagaagatg
cacctcctcaccaaggcaaaggtcaacctagagaaggagaggcaggagatggaggcgtgg
aacgtgaacatccgcagcgtggtagagcagacgtgtgccaaggccgtggaacagttgctc
agccacaaggaaaaggtcctgggccaactctctggctacctggaggagcggaaggaggcc
tctcggctgctgctttctgagctgggcttccaggagcaggtggcctccaccacggtggcc
tttgcccggaaggtgctgaatctgggccaagcggtggagatcgtgtccttggagcagatg
atctccgagaggctgaggcagctgcagagcttctcctgggagcccctcgccttgcaggtc
cccaagctccacatccagccagacctcctctatggctgcaaccttttccttctggagttt
cacgagaaggccacgacaaccaccccagagtgcagcatgggggactccacccaatggtct
aagaagaaaaaaaagcagaagcaacagcagcggccccagggagcagaagagggggaggcc
tccagacaggaaagggccccaagtggggaaagccttgggccggcggaagtgggtccagag
gtccctcggttgatcccaaaacctgtcttcttctgcagcttctgggtgaaagtcccaact
gacaaaaagcggccacaggtcacgggcttgttcccgtttggctccagcgaaatcctcgtg
gctgacgaggagaacaagaagttgaagcgcttctctctgcagggcgagttcaagggcacg
atcccggtgccgagcaacgtggccccattcagcgtggctgctgtgggcaacaaggcagtc
ttcaccgccggatcccagctctacgtcttaaatgaaacgggggggattatgtggcaaaag
gcactcaaggggggccaggccagccacgcagtgaccacctgtgatgggaactccgtggtc
gtgtctgtggcgggacatctggaggtgttcaacttgaaagggcaactcttggagaagatt
gtgccggaggcctcccacgaaaggtgcctggtattcctgggcagatggaaaaagggattt
gtggcatctgactggtaccgacatagcgtggtgctgctcgacaggaacggggatctggtg
accgaataccaggaggagcagctgagtgggtctcaaccaggcagcgtctgtgctgatgcc
cccgggatcgtctacgtggtgcttcgggagctgaacaagattgtggctttttcagaggcc
ggggaagagctgggatcatttctcacaacagagaatagcgtcttcaagccacgagtgatc
accattgccggggacggccattttgtggtagccctcaccaacggcaccatccatgtcttt
aagatcaagtatcagggcgagtaa
DBGET
integrated database retrieval system
