Protobothrops mucrosquamatus (Taiwan habu): 107285460
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Entry
107285460 CDS
T05763
Symbol
DDX55
Name
(RefSeq) ATP-dependent RNA helicase DDX55
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
pmur
Protobothrops mucrosquamatus (Taiwan habu)
Brite
KEGG Orthology (KO) [BR:
pmur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmur03009
]
107285460 (DDX55)
Enzymes [BR:
pmur01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107285460 (DDX55)
Ribosome biogenesis [BR:
pmur03009
]
Eukaryotic type
Pre-60S particles
Helicases
107285460 (DDX55)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Helicase_C_2
SBF_like
AAA_22
Motif
Other DBs
NCBI-GeneID:
107285460
NCBI-ProteinID:
XP_015669129
LinkDB
All DBs
Position
Unknown
AA seq
592 aa
AA seq
DB search
MEQVTEGTWESLPVELSPGVLQALRELRFSHMTPVQSATIPLFMTNKDVAAEAVTGSGKT
LAFVIPIIEILLRREEKLKKMQIGALIITPTRELAIQIDEVISHFIKYYPQFSQCLLIGG
KNPMEDVERFKERGGNILVATPGRLEDMFRRKSEGLDLAKAVKSLDILVLDEADRLLDMG
FEASLNTILDFLPKQRRTGLFSATQTQEVENLVRAGLRNPVRISVKEKGMAASNTQKTPT
RLQNYYMTCKADEKFNQLVHFLRQHKPEKHLVFFSTCACVEYYGKALESLIKNVKIMCIH
GKMKHKRNRIFTEFRKLPSGILVCTDVMARGIDIPEVNWVLQYDPPSSASAFVHRCGRTA
RIGHLGSALVFLLPMEEAYITFLAINQKCPMEELKPQRNVTDVLPKLKSLNLADRAMYEK
GMKAFVSCVQAYAKHECNLIFRIKDLDFASLARGFALLRMPKMPELRGKDLSDFAPVDID
TDSIAFKDKNRERQRQKLLEQWKEEGPVRRVGRKMPRNQAWSKQKAKKEKKRKLVAKRKR
EEGSDPDNEDMEELLNDTRLLKKLKRGKISEKEFEKTLLGSREGGSGSDSEG
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggagcaagtgaccgaagggacgtgggaatcgctgcccgtggagctcagcccgggcgtc
ctgcaggccttgcgggagctgcgcttctctcacatgacgcccgtgcagagtgcaaccatc
cctttatttatgaccaataaagatgtggcagctgaagcagtaaccggcagtggaaaaacg
ctcgcatttgtcattcccatcatagaaatactcctccggcgtgaagaaaagcttaaaaaa
atgcagattggcgcgcttatcatcactcccaccagagagcttgctatccaaatagatgag
gtgatctcccatttcattaaatattacccacagtttagtcagtgccttttgattggtggg
aaaaatcccatggaagatgtagaaagattcaaagaacgaggcggaaacatcctggtagcc
accccaggtcggttggaggacatgttcaggaggaaatccgaggggctggatttggccaag
gctgtaaaatctcttgatattttggtcttggatgaagcagatcgactgctggacatgggg
ttcgaagcaagtttgaatactatcctggattttctgcccaagcagagacggacaggtctc
ttctctgcaactcagacccaggaagtggagaacttagtgagagcgggactccgaaacccc
gtccgtatctcagtgaaggagaagggaatggcagcaagtaacacccagaagactcccact
cggctccagaattattacatgacctgcaaggcggacgagaaatttaaccagctggttcac
ttccttcgtcaacacaaaccagaaaagcatcttgtctttttcagtacctgtgcttgtgtg
gaatattatgggaaggctttggagtctttgattaagaatgtgaaaattatgtgcatccat
ggaaagatgaaacacaagaggaataggatctttacagagttccggaaacttccaagcggc
atcctggtttgtaccgacgtgatggcccgtggcatagacatcccggaggtgaactgggtt
ttgcaatatgacccaccgagcagtgcaagcgccttcgtgcatcgctgtggccgcaccgcc
cgtatcggccacctgggcagcgcgcttgtcttcttgcttcctatggaagaagcgtacatc
actttcctagccattaaccaaaagtgccccatggaggaactgaaaccgcagaggaacgtc
acggatgtcctacctaagctgaagtcgctaaacctggctgacagagccatgtacgaaaaa
gggatgaaggccttcgtgtcctgcgtccaagcctatgccaaacacgagtgcaacctgatc
ttccgaataaaagatctggactttgccagcctagcccgaggttttgccctcttgaggatg
ccaaagatgccggagctgagaggcaaggacctctcggactttgcccccgtcgacattgac
acggactcgatcgcgttcaaagacaagaacagggaaaggcagaggcagaagctgttggag
cagtggaaggaagagggtccggtccgcagagtggggaggaagatgccccgaaatcaagct
tggtccaagcagaaagcgaagaaggagaagaaaaggaaattggtggcgaaaaggaaaagg
gaggagggttctgacccagacaacgaagatatggaggagcttctgaacgacacccggctt
ttgaaaaagctgaaaaggggtaaaatcagcgagaaggagtttgagaagacgttgttgggc
agtagggaaggaggaagtggctcagactcagaaggataa
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