Protobothrops mucrosquamatus (Taiwan habu): 107285888
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Entry
107285888 CDS
T05763
Symbol
VPS8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
pmur
Protobothrops mucrosquamatus (Taiwan habu)
Pathway
pmur04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pmur00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
107285888 (VPS8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmur04131
]
107285888 (VPS8)
Membrane trafficking [BR:
pmur04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
107285888 (VPS8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
VPS8_N
zf_RING_Vps8
TPR_VPS8_2
zf-RING_Vps41
WD40_CDC20-Fz
Clathrin
zf-RING_11
zf_RING_Vps8_fungal
zf-RING_2
TPR_Vps41
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
107285888
NCBI-ProteinID:
XP_015669639
LinkDB
All DBs
Position
Unknown
AA seq
1403 aa
AA seq
DB search
MEEAFKTGTQSLDPDQGCFSMIDASSQQEAPSPKLSITELSKELESKSELIDDKEFDIPQ
VDTPPTLESILNETDDEEEPFVLEDPSLLNIDNIDTHSYDTSSVASSDSGDKSHLKRKKK
LRDSFSIHGSVIRLSLLKGISTQIVSAAAKVDAGLPTAIATSSLIAVGTSHGLALIFDPN
QALRLCLGNTSVGAQYGAISALSINNDCSRLLCGFAKGQITMWDLASGKLLRSIIDAHPP
GTAILHIKFTDDPTLAICNDSGGSVFELSFKRVMGVRTCESRCLFSGSKGEVCCIEPLHA
KAELRDHPINQYSLLAMASLTKILVIGLKPSLKVWMTFPYGRMEPSSVPLLAWYFVAAQT
SVNPVLAFCRGDVVHFLLVKRDESGAIHVTKQKQLHLHYDLINFTWINSHTIVLLDSVEK
LHVIDRHTQEELETVEISEVQLVYNSSHFKSLATGGNVSQALALVGEKACYQSISNCGGQ
IFYLGTKSVHVLTLRTWRERIDHLLKQECLNEALALSWSFHEGKAKAVVGLSGDEQKRKA
VVADRMVEILIHCADRTMKKCPEQGKIQVMEQHFQTMVPVIVDYCLLLQRIDILFGQMYD
KMSENSVAKGVFLECLEPYILSDKLVGITAQIMKDLLLHFQDKNLMANMEACIVHMDITS
LDIQQVVLMCWENHLYDAMIYVYNSGMNDYITPMEKLFKAIAHPLSAGKSLSDEQVVMGN
KLLVYISCCLAGRAYPLGNIPEDLVPLIKNQVFEFLIRLHSAEAPIDEEVYPYVRTLLHF
DTREFLNVLALTFEDFKNDKQAVEYQQRIVDILLKVMVENSDFTPSQVGCLFTFLAQQLA
KPNNTLFVNRMLFDQVLEFLCSPDDDSRHSERQQVLLELLQAGGIVQFEENRLIQMAEKA
EFYQICEFMYEREHRYDRIIDCYLHDPLRKEEVFSYIHNILSIPGYSTEEKQSVWQKTMK
HIEELTSVSPFKTADLISIHFSDEIEQIIQNLQDEHLLFQFLKSLLDPREGINQDLLQRS
PSITEQFIDLLCRYDADQVLETLKFLENYRLEETIQVTQKYQLHEASSYLLEKKDDIPGA
FLIMLEWLQTKLSTLTSGDKISAELPLLKDIEGTLAKTIALCQRNSHKFNQQKREALWFP
LLEAMLSPQRSALQPRLSEYLKNLTMQVLNNMTTFIALPLILQRILQDPVYGRGKLGEIQ
SLVLGMLDSFNYDQTLLETTTSLLNRDLHWSLRNLKASMTRGLNPKQDYCCICLQQYKRR
QQTGDQIIVFSCGHLYHSLCLLSKECGTETKGQMRWTCFKCSASHKGEKVSLTSLETKKR
TPVSLAQTSSECLLDPQQAQAFDQLCRLYRGTSRLALLTELSRDHGGEKHGFVQFSQGDS
ALNSIFQNETFQLHLSPPPLLED
NT seq
4212 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagctttcaaaactgggactcaaagccttgatccagatcaaggctgtttctct
atgatagatgcatccagtcaacaagaagccccttctcccaaattatctattactgaattg
agcaaagagttagaatcaaagagtgagctgattgatgacaaagaatttgatattcctcaa
gttgatactcctccaacattagaaagtattttaaatgaaactgatgatgaagaagagcca
tttgttcttgaggatccttctcttctgaacattgataacattgacactcattcatatgat
acttcttcagtagcaagctctgatagtggagataaatcacacctaaaaagaaagaagaaa
ctccgcgattctttctccatccatggctcagttatacgactgtcacttttgaagggtatt
tctacccagatagtatctgcagcagccaaagtggatgcaggtttacccactgcaattgca
acatcaagtcttatagcagtcggaacatcccatggtctagctttgatatttgatcctaac
caggctcttcggctttgcctgggcaatacctctgttggtgcacagtatggggctatatct
gctcttagcatcaataatgactgttcaagacttctgtgtggctttgcaaaaggacagatt
acaatgtgggatctggccagtggaaaactgttgcgatcaataatagatgcacatcctcca
ggaactgcaattttgcacattaagtttacagatgatccaactctcgcaatctgcaatgat
agcggtggttcagtatttgaactgtcattcaagagagtcatgggtgtgagaacatgtgaa
tctcgctgtttgttcagcggttcaaagggagaggtttgctgcattgagcctttacatgca
aaggctgagctgagagaccatcctatcaaccaatattctctgctagctatggcttcctta
acaaagattcttgtgattggattgaagccatctttgaaagtgtggatgacattcccatat
ggtcgtatggaaccatctagtgttccactgcttgcctggtattttgttgctgcccaaacg
tctgtgaatccagtgcttgctttctgtcgaggagatgtggtccatttccttctggtaaaa
agagatgaatccggagcaatacatgttacaaagcagaagcagctacatttgcattatgat
ttaatcaactttacatggataaactcccatacaattgtgcttctagacagtgtggaaaaa
ttacatgtgatagatcgtcacacacaggaggaacttgagactgtagagatatcagaagtt
cagttagtatataatagcagccacttcaaatcattggcaacaggaggcaatgttagccaa
gcactggcactggtgggtgagaaggcttgctatcagtcaatcagcaactgtggtggtcag
attttttatttgggtacaaagtctgttcatgttttgacactgaggacttggagggagagg
atcgatcaccttctgaaacaagaatgtcttaatgaagcattggccttgtcttggtccttt
catgaagggaaagccaaagctgttgtcggcttatctggagatgaacaaaaacggaaggct
gttgttgcagacagaatggttgaaattcttattcattgtgctgatcgaaccatgaagaaa
tgtcctgagcagggtaaaattcaagttatggagcaacattttcagactatggtccctgtc
attgttgattactgtcttctgcttcagcgaatagatatattattcggtcaaatgtatgac
aagatgagtgaaaattctgtagcaaagggagtttttttagaatgtcttgagccatacatt
ttaagtgataaattggttggaatcacagctcagattatgaaggatttgctacttcatttc
caagataagaatttaatggcaaacatggaagcttgcattgtacatatggatattaccagc
cttgatatacaacaggttgtccttatgtgttgggaaaaccacctgtatgatgccatgata
tatgtctataacagtggaatgaatgactatattactccaatggagaaattgttcaaagcc
attgctcatccccttagtgctggaaaatctctctcagatgagcaagtcgttatgggcaac
aaactgcttgtctacataagctgctgtttggcaggccgagcttacccattgggcaatatt
cctgaagacctagtaccattgattaaaaaccaggtctttgaattcctcatccgtttacat
tcagctgaggcccctatagacgaagaagtttatccctatgttcgtacactgttgcacttt
gatacacgagagttccttaacgttcttgcactgacatttgaagattttaagaatgacaag
caagctgtggaataccaacagagaattgtggacatattactcaaggttatggtggagaac
tctgattttaccccatcacaagttggatgtctttttactttccttgctcaacagcttgct
aagccaaacaacacattgtttgtgaataggatgctatttgaccaggtccttgaatttctc
tgcagtcctgatgatgattcacgacactctgaaagacagcaggttcttttagaattgctt
caggctggaggtatagtgcaatttgaagaaaacagactcattcaaatggcagaaaaagct
gaattctaccagatctgtgaatttatgtatgaacgggaacatcgctatgatagaataatt
gattgctacttgcatgatcccttgagaaaggaagaagttttctcctatatccacaatatc
ctttccattcctggatatagtacagaagaaaagcagtctgtgtggcagaaaactatgaaa
catattgaggagttgacatcagtgagtccttttaaaacagcagatcttatttctattcat
ttcagtgatgagattgaacaaataattcagaatctacaggatgagcatttgcttttccaa
tttttgaagagtctccttgatccaagggaaggtatcaatcaagacttgcttcaacgttcc
ccctctattactgaacagtttattgatttgctatgtcggtatgatgctgaccaggtctta
gagactttgaaattcctggagaattataggctggaagagacaattcaggtcacccaaaaa
tatcagctccacgaggcttcttcttacttgcttgaaaagaaagatgacattcctggtgcc
ttcttaattatgcttgagtggttacaaaccaaactttcaacactgacttccggagataaa
atttcagcagaacttcctttattaaaagatattgaaggtaccttagcaaaaacaattgca
ctttgccagaggaattcacacaaatttaatcagcagaagcgagaagcactgtggtttccg
ctcctagaggcaatgttgtcaccccaaagatctgcactgcaacctcgtttgtctgaatat
ttgaagaacttaacaatgcaagtattgaacaatatgacaacattcattgctctgccatta
attttgcagagaatcctacaggatccagtatatggaagaggaaaacttggagaaattcag
agtcttgtgctgggtatgctagacagctttaactatgatcagacccttttggagacaaca
acaagcttacttaaccgcgatctccactggtctttacgtaatttgaaagcatctatgact
agagggctcaatcccaaacaagattattgctgtatttgtttgcaacagtacaagagaagg
caacagacaggtgaccaaattatagtcttcagttgtggccatttgtaccattctctttgt
ctgctaagtaaagagtgtggcactgaaacaaaaggacagatgagatggacttgctttaaa
tgcagtgcaagtcataaaggagagaaagtaagtttgacttccttggagacgaagaaaaga
actccggtatcacttgctcagactagttcagagtgtctgttggatcctcagcaagctcag
gcttttgaccagctctgtcgtctatatcgtggaacatcaaggttggcacttttgactgaa
ttgtctcgagatcatggtggtgaaaaacatggttttgtccaattctcccagggggattct
gccctgaatagtatcttccaaaatgagacttttcagcttcatctcagtcctcctcctctt
ctagaagactaa
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integrated database retrieval system
