Protobothrops mucrosquamatus (Taiwan habu): 107286069
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Entry
107286069 CDS
T05763
Name
(RefSeq) collagen alpha-6(VI) chain
KO
K06238
collagen type VI alpha
Organism
pmur
Protobothrops mucrosquamatus (Taiwan habu)
Pathway
pmur04510
Focal adhesion
pmur04512
ECM-receptor interaction
pmur04518
Integrin signaling
pmur04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pmur00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107286069
04518 Integrin signaling
107286069
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107286069
09142 Cell motility
04820 Cytoskeleton in muscle cells
107286069
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmur04147
]
107286069
00536 Glycosaminoglycan binding proteins [BR:
pmur00536
]
107286069
Exosome [BR:
pmur04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
107286069
Glycosaminoglycan binding proteins [BR:
pmur00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107286069
Hyaluronan
Extracellular matrix or blood plasma proteins
107286069
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
vWA_SIBA-E
DUF1194
Motif
Other DBs
NCBI-GeneID:
107286069
NCBI-ProteinID:
XP_029139654
LinkDB
All DBs
Position
Unknown
AA seq
2256 aa
AA seq
DB search
MAAPESAVAALALEAKDWNIAQTLKMLLILIFIVTGTQTFMAEKPVPKPVDIMFLVSSSN
TSFLHVKTFISTVIKILPFGPNEYRIALAQYTDQVYSEFQLDTYKGKNPMLNHIKKKMVL
RTGLLKTGSALYKIHEIDYWKPILGEERSKILILITSQQSKDDIKEAGLLLQKAGVNIIS
IGVEEASTDELRLMATKPFYFFFPRIEDLSLFAWNISRIVVEAIHIGNTDINLLNMTAVN
MNYKTAIEACHSDGAADLVFIVDAGSSQTNFEKMQLFLENLVSSLDVKEKCIRIGLVTFS
TKPQVISSLQMTTDGIHLLQHIQGLSPKPGKANIGSAINFTRQKVFSASAGSRKAQGVEQ
IALLISHRPSEEDVKDAAKLLRRAGVTVFAVGIKEANITQLSQIAAYPSPQYVTQLNTFS
QLLNKSLDFQKKIMNQIQQKLYMDTKRTELLKKGCVDMEEADIYFLIDGSSNLDYYDFVD
LKLFLKEVVKLFTIGPNKVRIGVVQYAETSELEFDLEEFGKTNDILKAIDNIRQIGGTPH
TGAALTFIQPLFRKFQSQRSRNVPCHLIVLLDQISKDHVKEPARRLRNEKINLYAIGVRH
TNASQIYTIADSTNQAYFVNDFASLKYIKNDVVREICATEVCKEKKTDIVFLVDSSRSSG
TENFEKMKNFMRLLVDKSDVSPETVHVGVVQFSDKCKEEFQLNQHLTKLDINNAIGRMSL
MGQSTLTGGALQFVSNYFKPAKGARLYVKKVLILITNGEAQDEVKNHAEALREENIIIYS
VGLFQANKTQLMEISGKPEMVFYVEDFEVLKYFKNEILFEICSSSDECRRIERLDIVFVI
DGSGSIDPKEYDIMKDFMITLVKKSDVGYDRVQFGAVKYSAEPETFFYLNQFNTKSAIIE
AIQNDKPIGETTYTAKALRHSENLFSKKHGGRKHQNIPQVLIVITDGDSHDAANLEEVSK
NLRARGIVIYAIGIERAKPDELLAMAGSEDRYFYVNTFEGLKNLYPRLSDNICGVSKPEC
GIPADLVFLIDGSNSISDSDFTKMKNFLQDLIHPFDTSHNVQVGIAQYSDRYQEEFSLNI
FSRKSELENQIRHIQQMEGLQTYIGAALKKVKLYFTPEGGSRINEKIQQILLVITDGRSH
DRVVQAAEDLRKKGVDIYAIGVGRIDHLQLSQIAGSSDRKYTVDNFSELKVIKKRLVDDI
CEQEDKTSCFMDIVVGIEVSSQNQGDYVFHGQPQLEFYLPQIISALTSLTSLSCYAGSQT
QTSVALKIKNTDPPVASKFQIDSEKLINSFVGTTITNASHLTAEFLDSLWETFQIKSANR
RKVLLIFSDGLDDRIEMLEDKSEELKKKGLDALITVVLEGASNFNDMHFIEFGKGYGYKI
QLNIGMRDIASQLFKYMSNIAERTCCCMYCKCIGEDGEPGEQGRYGMEGPQGFEGSPGHL
GDEGAPGPRGVPGSDGDKGYSGCRGNRGPKGQRGITGEKGSNGEKGFDSINGEPGSPGVP
GFKGEKGDPGNQGSPGVKGIHGEYGENGFQGDLGIPGINNNTAGSKGFKGRNGRQGEKGP
SGPIGDPGSKGTKGYEGKRGPHGPQGRKGAQGPGGFPGDQGFKGPQGEKGIQGVKGMKGN
PGREGFPSIPGRTGPVGILGKLGPRGNKGEFGDSGMKGERGLSGLRGLRGDSGASGYGKL
GNKGIKGQKGFPGDVGQEGVVGNVGIPGEIGLRGIQGQKGPAGAIGQKGALGKHGPPGRR
GNKGFKGMASFSPCELIAYIRKHSSCYQGTAECPAYATELVFALDISQDTTLQMFEQMKK
IVTEIVNQTNIRESNCPVGARVAVVSYSSKTNYLIRFTDFQSKNKLLQEINRLSFQRTTN
RRDIGGSMRFVARHLFKRTLQGANVRKIAVFFSNGESDHPSSVNTALLEYSALEIVPVIL
AFNNIPETNRAFLMDDSGQFQVITIPTGGDYSPFLKRFQLCTLCYDKCKPDAACGLNRRT
RPPWEYVDTAFILDSSSKLGPDEFEKLKEFLSRALNHFDISSQPATSSVGDRIALVSHAV
PAFRPQTQVIPVKKEFDLVTFNTTQLMKKYIQEYVQQMDGQSAVGHAIQWTINHIFSHTP
YPRKHKVIIIISVGGTSQWDKAVLRKVSLRAKCQGYALLVVSVGRVYDSTELQELASYPL
EQHLIQLGRIHKPELNYAIMFLKPFLHFLQNGFNSYPPSELKTKCHKISTKKSRHVLKRH
SHKSLEKLDMRYKLITLMKKEGKKKKKEKLFLIRKK
NT seq
6771 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcctgaatcggctgtggctgcattggctctcgaagctaaggattggaacatt
gctcaaactttgaaaatgctgttgatattaattttcatagttactgggacacagactttc
atggctgagaaaccagttcccaagcctgttgatattatgtttttggtttccagtagtaat
acatctttcctgcatgtcaaaacatttattagtacagtaatcaagattttaccttttggc
cctaatgaatatcgcatcgcacttgctcaatatactgatcaagtatatagtgaattccaa
ctggatacctacaaaggaaagaatccaatgttaaatcacatcaaaaagaaaatggtgctt
agaacgggcttattaaaaactggcagtgctctctacaaaatacatgagattgattactgg
aaaccaattcttggagaagaaagatccaagattttgatattgatcacatctcaacaatct
aaagatgatataaaagaagctggtttgctgctgcagaaagctggagtaaatatcatttca
attggggtggaggaggcctctactgatgaactacgtctgatggctacaaagccattttat
ttcttctttcctagaatagaagatcttagtttatttgcttggaatatttctaggattgtg
gttgaagctattcacataggtaatactgatataaaccttttaaatatgacagctgtaaac
atgaattacaaaacagcaatagaagcatgtcatagtgatggagctgctgatttagtattt
atagtggatgcaggctcgtcacaaacaaacttcgaaaagatgcagctctttttagaaaac
ctggtatcttctttggatgtgaaggagaaatgcataagaataggcctagtgactttcagc
actaagccccaggtgatatcttcactgcagatgacaactgatggaattcaccttctacaa
catatccagggcctatcacctaagccaggaaaagctaacataggttctgccattaatttt
acaagacagaaagtcttcagtgccagtgctggaagcaggaaggctcaaggggtggaacaa
atagcccttctgattagtcacaggccttcagaagaggatgtgaaagatgcagctaaattg
ctcagaagagctggtgtgactgtatttgctgttggcattaaagaggccaatattacccaa
ttaagccagattgctgcttacccatcaccacagtatgttactcaactaaacacattttct
cagttgcttaataaatctctggattttcagaagaaaattatgaatcaaatacagcagaaa
ctctatatggataccaaaagaacagaacttctgaaaaaaggatgtgtggatatggaagaa
gctgatatttattttctcattgatggttcatcaaacctcgattattatgactttgtggat
cttaaattatttttgaaagaagtagttaaattgtttaccattggcccaaataaagtccgc
attggagttgtacagtatgctgaaaccagtgaactggagtttgatcttgaggaattcggc
aaaacaaatgatatattgaaagccattgataacattcgtcaaattggtgggactcctcac
acaggagcagctttgacattcattcagcccttgttcaggaaattccaaagtcagcgttcc
agaaatgtaccctgccatctgattgtgttattagaccagatatcaaaagaccatgtaaag
gagcctgccaggagattgcggaatgagaagataaatctttatgccattggtgtaagacac
acaaatgcatctcagatctacacaattgcagattcaactaatcaagcttattttgtgaat
gattttgcctctttaaagtacataaagaatgatgttgttcgggagatctgtgctacagaa
gtctgcaaagaaaagaaaacagatattgtgtttctggtggacagctctagaagcagtggg
actgagaactttgaaaaaatgaagaacttcatgaggttgctggtggacaaatctgatgtc
agtccagagacggtgcacgttggagttgtccaattcagtgataaatgcaaagaagaattt
caactaaatcaacacttgacaaaactagatatcaacaatgctattgggagaatgtctctt
atgggacagagcacactcactggaggtgcactgcaatttgtgtccaattatttcaaaccc
gccaaaggagcacggctatatgtcaagaaagttcttattctgataactaatggggaagca
caagatgaggtgaaaaaccatgcagaagctttgagagaggaaaatataatcatttactca
gtggggctgttccaggctaacaaaacacagctgatggagatcagtgggaagcctgagatg
gtgttttatgtagaagattttgaggttctaaagtacttcaaaaatgagatcctctttgaa
atatgtagctcttctgatgaatgccgaagaatagaacgtctagatattgtttttgttatt
gatggttctggaagtatagatcccaaagaatatgatattatgaaagatttcatgataacc
ttggtgaaaaaatctgatgttggctatgatcgagttcagtttggagcagtcaaatattct
gcagagccagaaacatttttctatctcaaccagttcaacaccaaatcagcaattattgag
gctattcagaatgataaacctattggggaaacaacttatacagccaaggcattgcgtcat
tcagaaaatcttttctctaagaagcatggcggccgcaagcaccagaacattccccaagtt
cttatagtgataactgatggggattcccatgatgcagcaaaccttgaagaagtatcgaag
aatctcagggctcgcgggattgtgatttatgctattgggatagaaagagccaagccagat
gaactcttggccatggcaggatctgaagacagatatttctatgtaaatacatttgaaggc
ctgaaaaatctctatcctagattatctgataacatttgtggtgtttcaaaaccagaatgt
ggaattccagcagatctggtattcctgattgatggttctaatagtataagtgacagtgat
ttcactaagatgaagaattttttacaagatttaattcatccgtttgacacctcccacaat
gtgcaagttggtattgctcagtatagtgacagataccaggaagaattcagcctcaatatt
ttctcacgcaaatcagaacttgaaaatcaaatcagacacattcaacagatggaaggactt
cagacatatattggtgctgcccttaagaaagtgaagctctactttactccagaaggtggc
agcagaataaatgaaaagatccagcagattttgctggtgatcactgatggaaggtcacat
gatagagttgttcaagcagcagaagatctgagaaagaaaggcgttgatatatatgccata
ggagtagggagaattgaccatttgcagcttagtcagatagctggctcctcagacagaaaa
tacacagttgataatttcagcgaactgaaggtaattaaaaaaagactagttgatgatatt
tgtgagcaagaagataaaacatcatgcttcatggatattgttgtgggaatagaagtctct
tcacaaaatcaaggtgattatgtattccatggacagccccagctggaattctatcttcct
caaattataagtgctctcacatctttaactagcctaagctgttatgcaggatcacaaaca
caaactagtgtggcattgaaaattaaaaacacagatccaccagtggcatcaaagttccaa
attgatagtgaaaaacttataaacagttttgtgggcaccaccatcaccaatgcatctcat
cttactgcagagttcttggattcactttgggaaacattccaaatcaaatctgcaaacaga
aggaaagtactactaatcttttcagatggcttggatgatagaatagaaatgctggaagac
aaatcagaagaactgaagaaaaaaggattggatgcattaataactgtggttttggaagga
gcttcaaattttaatgacatgcacttcattgaatttggaaaaggctacggctacaagatc
cagctgaatattggcatgagagatattgccagtcaattgttcaaatacatgagtaacatt
gctgaacggacttgttgctgtatgtactgcaaatgcattggtgaagatggagaaccaggc
gaacaaggaagatatggaatggagggacctcaaggttttgaaggaagcccaggacactta
ggagatgaaggagcacctggtccaagaggggtgccaggatcagatggtgataaagggtac
agcggttgccgaggcaatagaggccctaagggacaaagaggaataactggtgagaaggga
agcaatggagaaaaaggatttgatagcattaatggagagccaggctcccctggggttcca
ggatttaaaggagaaaaaggtgaccctggcaaccagggcagcccaggagtcaagggaatc
catggtgaatatggcgaaaatggtttccaaggagatctgggtattcctggaataaataat
aacacagcaggatcaaaaggttttaaaggaagaaatggaagacagggtgaaaagggacca
tcaggccccataggagatccaggatccaaaggaaccaagggatacgaaggcaaaagaggt
ccccatggtccccagggaagaaaaggagcacaggggccagggggttttcctggagatcaa
ggatttaagggcccacagggtgaaaaaggaattcagggagtgaaaggaatgaaaggaaat
ccaggaagggaaggattcccaagtattccaggaagaacaggtccagtaggcattcttggg
aaattgggacccagagggaataagggagagtttggtgattctggaatgaagggggagaga
ggattatctggactacgaggactaaggggggatagtggtgcaagtggatatggtaagctg
ggaaataaaggaataaaggggcaaaaaggatttcctggagacgtaggacaggagggtgtt
gttggcaatgttggaattccaggagaaattggattaagagggatccaagggcaaaagggt
cctgcaggtgccatcggccaaaaaggagctttaggaaagcatggtcctccaggtcggcgg
ggtaacaaaggatttaaaggcatggcttctttttcaccatgtgagctcattgcttatatt
cggaaacacagttcttgctaccaaggaactgcagaatgtccagcatatgctacggaacta
gtatttgctttggatatatcccaggataccacactccagatgtttgaacagatgaaaaag
attgtcacagaaattgtgaaccaaacgaacatcagagagagcaattgtcctgtgggagcc
agagtggctgttgtgtcctacagctccaaaaccaactacctgatccgctttacagatttc
cagagcaagaacaagttgttgcaggagatcaatagactttctttccagagaacaaccaac
agacgggacattggtggatccatgaggtttgttgccaggcatctcttcaagcgaactctc
caaggtgctaatgtgaggaaaattgctgtcttcttcagcaatggagagtccgaccatcca
agttctgtcaacacagcactccttgaatacagtgcattagagattgtcccagtcattcta
gcttttaataacatacctgagaccaatcgtgcttttctgatggatgattctggacaattt
caagtcatcaccattcccactgggggagattactcaccatttttgaaaagattccaactg
tgcacactttgctatgataaatgcaaaccagatgctgcctgtggacttaacagaagaacc
agaccaccatgggaatatgtggatactgctttcattctggatagctcaagcaagttaggt
cctgatgagttcgaaaaactgaaagaatttctaagcagagctctgaaccattttgatatt
tcctctcagcctgcaacttcttctgttggggacagaatagcattggtgagccatgctgta
ccggcattcagaccacaaacccaggtgatacctgtaaagaaagaatttgatttagtgact
ttcaatacaacacaactcatgaaaaaatatatccaggaatacgttcaacaaatggatggt
caaagtgctgttggccatgctatacagtggacaattaaccacattttctcacataccccg
tacccaaggaaacacaaggttatcattattatatctgtgggtggaacaagtcaatgggat
aaagcagtgttaaggaaagtgtctctgagagccaagtgtcaaggctacgccttgctggta
gtttctgtgggacgggtctatgacagcacagagcttcaagagctagcaagttaccccctg
gagcagcacctaattcagcttggcagaattcacaagcctgaactaaactacgccattatg
ttcctgaaaccttttctacattttcttcagaatggattcaacagctatccaccatctgaa
cttaaaacaaaatgtcacaagatcagcactaaaaaatctagacatgttttgaagcgtcac
agtcacaaatcattggaaaagttggacatgagatataagctgataacactgatgaaaaaa
gaaggaaagaagaaaaaaaaggaaaaactttttctaataaggaaaaagtag
DBGET
integrated database retrieval system
