Protobothrops mucrosquamatus (Taiwan habu): 107286558
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Entry
107286558 CDS
T05763
Symbol
HDAC6
Name
(RefSeq) histone deacetylase 6
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
pmur
Protobothrops mucrosquamatus (Taiwan habu)
Brite
KEGG Orthology (KO) [BR:
pmur00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pmur01009
]
107286558 (HDAC6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmur03019
]
107286558 (HDAC6)
04131 Membrane trafficking [BR:
pmur04131
]
107286558 (HDAC6)
03036 Chromosome and associated proteins [BR:
pmur03036
]
107286558 (HDAC6)
Enzymes [BR:
pmur01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
107286558 (HDAC6)
Protein phosphatases and associated proteins [BR:
pmur01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107286558 (HDAC6)
Messenger RNA biogenesis [BR:
pmur03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
107286558 (HDAC6)
Membrane trafficking [BR:
pmur04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
107286558 (HDAC6)
Chromosome and associated proteins [BR:
pmur03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
107286558 (HDAC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
Motif
Other DBs
NCBI-GeneID:
107286558
NCBI-ProteinID:
XP_015670435
LinkDB
All DBs
Position
Unknown
AA seq
1095 aa
AA seq
DB search
MASDLGNGSVLDPKSVPALDIEAPLKKANRKGGLPEAKRKGRAKKMNKDAEDLLLGLQRL
DLTSECAAPLGTGLIWDNRMTEFCCPWDESFPECPERLVTIRDKLLQYELLERCVPVLGR
EISEEEILLAHSQEYLTLMKSTETMSETELRSLADTFDSVYLHPNFYRCACLAAGSVLQL
VEKVWSGELRNGLAVVRPPGHHAHRSKMNGYCMFNNIGIAAQYARQKLGVERVLIVDWDV
HHGQGLQYLFEENPSVLYFSIHRYEGGNFWPHLPESDSHAVGRGRGEGYNINVPWNQTGM
RDADYLSAFLHVLLPVALEFQPQMVLVAAGFDAVIGDPKGEMAATPACFAQLTHLLKSLA
GGKLILSLEGGYNLQSLAEGTCTVLKTLLGDPCPLMESPFLPCSSALSSVSQTIAVHSKY
WKNLRRISADVPQEDGKLSVAWPSASPVSVADTLSRSAAELIQPQPPSCTGLVYDEKMME
HYNMWDSHHPELPQRVSRIFQRHRELHLTERCCRIPARLASEEELQMCHSLAYVETLKST
ATMKPRDLHRQGDQYNSVYICASSYVCARLAAGSAFSAVEAVLSGKTQNAVAIVRPPGHH
AESDTACGFCFFNSVALAARHAQRLAQRPLRVMILDWDVHHGNGTQHIFEKDPSVLYISL
HRYDNGTFFPTSEDADYDRVGVGPGEGFTLNVPWNCSRMGDSEYLAAFHQIVMPVGYEFN
PELVLVSAGFDAARGDPLGRCLVTPECYAHMTHLLLGLAGGKVAVVLEGGYNLESISESM
TMCTRSLLGDPPPPLGRLKPPHLSALQSLARVAAVHRKYWASLRLEVPATLWEKPRTRAG
KETPIPHEIPDPAPQELLQSPVAQSVEAISDAVAGLGSLQLEDNLMEEGETASSSLSPDS
SPVGEETQPKVGGSPKEAEPAEEAPREGVSAEGFSAEVMAPDKEASLQHHRRINIEVVLL
DEAAGGCSSFDKQLGEGGADSGLFYAVTPLPWCPHLSSVLPVPPVGLNVLEPCAECGSEM
ENWVCLVCYKVCCGRYINQHMLDHNKESGHPLVLSFADLSAWCYDCQAYIHHPVLLEAKC
QAHKLKFGVDMHLSS
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgatttgggaaatggctcagtattggaccccaaatctgtgcctgctttggac
attgaagctccattgaaaaaggctaacaggaagggagggcttccagaggccaagcggaaa
ggacgggcaaaaaagatgaacaaagatgctgaagatctgcttttgggcctgcagcgactg
gatcttacttcagaatgtgctgctcccttaggaactggactgatttgggataatcgaatg
accgaattttgctgcccgtgggatgaaagtttcccagagtgcccagagcggttggtgact
attcgggacaaactgcttcagtatgaactgttggaacgttgtgtcccagttttgggccga
gaaatttctgaggaagagatcctcttggctcacagtcaagaatacttgacgctcatgaaa
tcaactgaaacaatgagtgagaccgagttaaggtctctggcagatacctttgattctgtt
tacctgcatccaaatttctaccgctgtgcctgccttgctgctggttctgtcttgcaactt
gtggagaaagtatggtctggagaactccgtaatgggctagctgtggtcaggcctcctgga
caccatgctcaccgcagcaagatgaatggctactgcatgttcaacaacataggcattgca
gcgcaatatgcccgacagaaactgggggtggagcgggtgcttatcgttgactgggatgtg
caccatgggcaaggcctccaatacctctttgaggagaatcccagcgtcctttatttctcc
atccatcgctacgaaggagggaatttctggccccaccttccagaatctgacagtcacgca
gtgggcagaggtcggggagagggctacaacatcaacgtgccctggaaccagaccggaatg
agggatgctgactacctctctgcctttttacatgttctactaccagtggccttggagttc
caaccccagatggtcctggttgctgcgggttttgatgccgtaattggtgaccctaagggg
gagatggctgccaccccagcatgctttgctcaactgacacacctgttaaagtcactggct
ggaggcaagctgatcttatctctggagggtgggtataatctccagtctttggcagaggga
acctgcacggtccttaagactcttctaggagacccctgcccgctgatggaatcacctttc
ctcccatgtagcagtgctctcagctcagtgtctcagaccattgcagttcatagcaagtat
tggaagaacctacggaggatcagtgccgatgtgcctcaggaagatggcaagctcagtgta
gcttggccgtcagccagccctgtctctgtagctgataccctctccaggtcagcagctgaa
ctgatacagcctcagccgccttcttgcacggggctagtctatgatgagaaaatgatggag
cactacaatatgtgggacagccatcatccagagctgcctcagagagtatccaggatcttc
cagcgccacagggagctgcatctgacagaaaggtgctgccggatcccagcccgtcttgcc
tctgaagaagaactacaaatgtgccacagcctggcttatgtggagacattgaagtccaca
gccaccatgaagccccgtgacctgcatcgccagggggaccagtacaattctgtctacatc
tgtgccagctcctatgtgtgtgcccggttggcagctggatccgcattcagcgcagtagag
gctgtgctctctgggaagactcaaaatgctgtggccattgtccgcccgccaggacaccat
gctgaatcagatactgcctgtggcttctgcttcttcaattcagtggctttagcagcacgc
catgcccagcgcctggcccagaggccgttgagggttatgatactagactgggatgttcac
catggcaatggaacacagcacatatttgaaaaggatcccagtgttttgtacatctccctc
catcggtatgacaatggcactttcttccccacttctgaggatgcagattatgaccgagtg
ggtgtggggcctggtgaaggcttcacccttaacgtgccttggaactgttcccggatggga
gactctgagtatctggcagccttccatcagatcgtcatgcctgttggctatgagttcaac
ccggagctggtcctggtgtcggctggttttgatgctgctcgaggagacccattggggagg
tgtctcgtgaccccggaatgctacgcccacatgacccacctcctcctgggtttggcagga
gggaaagtagccgttgtcctagagggtggctacaacctagaatctatctcagagtccatg
actatgtgcacgcgcagcctcctgggggatcctccacccccactcggacgcctaaagccc
ccccatctgagtgccctgcagtcattggcccgtgtcgctgctgtgcaccgtaaatattgg
gcaagcctccgactggaagtgcctgctaccctgtgggaaaagcccaggactcgagctggg
aaggaaactcccattccacatgaaattcctgatccggcccctcaggagttgctccaaagc
cctgtagctcagtctgtggaagctataagtgatgccgtggcgggcctgggctccctccag
ctagaagacaatctcatggaagagggcgagacggcttcgagttctctctctcctgattct
agcccagtgggtgaagaaactcaacccaaagttggtggatcccctaaggaagcggagcca
gcagaggaggcaccaagggaaggcgtatcggcagagggcttctctgctgaagtaatggct
cctgacaaagaagccagcctgcagcatcaccgcagaatcaacattgaggttgtcctgttg
gatgaagcagcaggaggctgttcttcgtttgacaagcagcttggggaaggtggggccgac
agtgggctcttttatgccgtgactcccttaccctggtgcccccacctcagctcagtgctg
cctgtgcctcctgtgggcttgaatgtgttggagccttgtgcagaatgtggtagtgagatg
gagaactgggtttgtctggtgtgctataaggtctgttgtggacgctacattaatcaacat
atgctggatcacaataaggaatctgggcatccactggtacttagctttgcagatctctct
gcttggtgctatgactgccaagcctatatccatcacccagtccttcttgaagccaagtgc
caggctcacaagctgaagtttggagtggacatgcacctatcttcctaa
DBGET
integrated database retrieval system
