Protobothrops mucrosquamatus (Taiwan habu): 107286669
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Entry
107286669 CDS
T05763
Symbol
COL4A4
Name
(RefSeq) collagen alpha-4(IV) chain
KO
K06237
collagen type IV alpha
Organism
pmur
Protobothrops mucrosquamatus (Taiwan habu)
Pathway
pmur04510
Focal adhesion
pmur04512
ECM-receptor interaction
pmur04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pmur00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107286669 (COL4A4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107286669 (COL4A4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
107286669 (COL4A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmur04147
]
107286669 (COL4A4)
00536 Glycosaminoglycan binding proteins [BR:
pmur00536
]
107286669 (COL4A4)
Exosome [BR:
pmur04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
107286669 (COL4A4)
Glycosaminoglycan binding proteins [BR:
pmur00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107286669 (COL4A4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
107286669
NCBI-ProteinID:
XP_029139815
LinkDB
All DBs
Position
Unknown
AA seq
1663 aa
AA seq
DB search
WLIIVASVQPSYGGSYTGHCGGEDCSICRCFPEKGSRGKSGQPGVQGPIGDLGSIGPIGF
PGEKGQRGDLGLPGPPGERGNMGPTGVPGFSGLDGMPGLPGYEGPRGKPGADGCNGSRGD
PGFPGEVGCIGPKGSLGIPGQKGEKGNSIYISKFIQGTTGERGDPGPQGMPGHRGEKGHR
GPSGFPGQPGEQGFQGQPGLPGEQGNPGIGVEGQKGEPGDVGPPGSPGQPLLVGPPSSRL
LKGEKGIKGMPGSTGSRGLRGHKGAFAIGDKGDNGIPGFPGEQGILGSYGSPGLPGNKGK
TGTHGIPGQDGSIGIKGNPGENGQPGPPGPRGTTHTGPKGIQGDPGDPGFSGERGTDGFP
GSPGDKGSQGEDGVSFPGPKGALGVEGPQGFHGGPGLSAQSSTSPGRPGSPGLPGFPGVP
GQRGLPGPPGVACKGRGSSGEPGDKGQRGSPGERGGKGEKGNPGNCSCGLGPCGPPGKQG
LPGIPGRKGEMGTPGKYGRKGDPGFLGRRGEPGPLGLPGPFGLTGEKGDKGDPVEVRIKG
VKGQRGVPGTHGFPGINGTAGRAGDGGLPGDKGSQGEDGRAIQGEKGFPGDPGIPGSRGQ
MGTPGFGIQGPQGVSGLPGDPGNPGLKGTSGPNGQKGITLPSGRTYPGNPGIPGFKGIPG
PKGLRGPPGPPGSNGFDGFKGQKGRLGTSGNPGPEGVSGETGDPGDPGEQGSSLDGPPGL
PGFPGLQSPKGVPGDTTHSPPGTPGNRGLPGLPGLPGLSGDPGFPGLQGQVGTPGLPGAK
GLQGQKGDTGVMGYPGSPGLACEKMLEGLPGPSGSFGAQGPKGLKGIKGPGGDVGEPGPA
GMKGLPGGPGTQGPSGFPGLRGDPGFSGGNGLPGLPGTKGDKGSQGMQGFPGLPGNAGEM
GASGVKGEEGHIGLSGPPGEFGRKGSKGEPGSPGDKGSISVLQVKGQNGEPGLPGDEGLP
GVQGDKGNAGFRGIPGPPGKQAAPGTQKGQPGDEGHSGSQGSLGPPGPSGVAGVIGFQGQ
KGDQGAQGPSGPPGHPGLGGQKGSKGGRGDPATHYGQPGKKGPIGVQGSPGLPGLPGDQG
MPGVQGESGKQGSKGLPGNVGSPGFPGVQGAAGFPGPPGEQGRPGFLGTPGFPGLPGTPG
RKGLLGSPGVNGVNGQKGQKGLSGPPGLSKMGPPGCIGEQGPKGNRGEPGLPGSTQLGPQ
GEKGLRGPPGKPGVSGSAGRMGQSPENRTCGFPGDQGPAGADGIRGPPGNPGPPGKIILM
KGDPGDSGTLGPPGVPGPCGKQGTKGIPGNQGRKGSKGLMGKPGLQGSPGVPGEPGAQGL
QGPTGPVGHKGYRGDPGEPGRVDYSSCPKIPGPPGVLGPRGPPGFVGLRGPIGFPGPPGN
KGEEGSLGEQGLEGSLGPLGPHGDQGDMGEKGNTGSQGPSGQTGIPGPPGSASKWSSGFL
LVLHSQSETEPFCPEGMARLWTGYSLLYFEGQEKAHNQDLGLAGSCLPVFSTMPFTYCNV
NEVCYYASRNDKSYWLSSAAPLPMMPLSDEEIQPYISRCVVCEAPAQAVAVHSQDQSIPS
CPPNWRSLWIGYSFLMHTGSGDQGGGQSLTSPGSCLEDFRSAPFIECQGQQGTCHFFINE
YSFWLVTVNNETQFSSSPLSGTIKDEQEQRQNIGRCQVCMKYA
NT seq
4993 nt
NT seq
+upstream
nt +downstream
nt
gtggctaataattgttgcttcagtccagccatcttatgggggttcatatactggacattg
tggtggagaagattgttccatttgtcgatgctttcctgaaaaaggctcaagagggaaatc
tggtcagccaggagtacagggtccaattggtgatctgggttccattggacctattggttt
tccaggagaaaaaggccaaagaggtgatcttggtctacctgggccacctggtgaaagagg
aaatatgggtccaactggagttccaggattttcaggtctagatggaatgccggggctacc
aggttatgaaggacccagaggaaagcctggggcagacggatgtaatggttcaagaggcga
tccaggatttccaggagaggttgggtgtattggaccaaaaggctcacttggtatccctgg
tcaaaaaggagaaaaaggaaattccatatacatttctaaatttattcaaggaacaactgg
agaaagaggggaccctggacctcaaggcatgcctggtcatagaggagaaaagggacacag
aggtccatctggattcccaggccaaccaggggaacagggttttcaaggtcaacctggttt
accaggtgaacaggggaatccaggaattggagtggaaggacaaaagggagagccgggtga
tgtaggacctcctggatctccaggacagccattattggttggaccgcctagttctagact
cttaaagggagaaaagggaataaagggaatgcctggatctactggctcaagaggattgcg
tggccacaaaggtgcatttgcaattggagacaagggtgataatgggattcctggttttcc
tggagagcagggaattcttggttcgtatggttctccaggtttaccaggaaacaagggtaa
aactggaacacatggaattcctggtcaagatggctcgataggcattaaggggaatcctgg
agagaatgggcagcctggaccaccaggacctcgaggaactacacacactggaccaaaggg
tattcagggagacccgggagaccctggattttctggagagagaggaacagatggatttcc
tggttctcctggtgacaaaggaagtcaaggggaagatggagtcagctttcctggtcccaa
aggtgcattgggtgtagagggtcctcaaggctttcatggtggccctggtctctcagctca
atctagtacatctccaggaaggccaggatctccaggattacctggttttccaggagtacc
aggacaacggggcttgcctggaccacctggtgttgcttgtaaggggagagggtcctctgg
agaaccaggagataaaggtcaaagaggatcacctggagaaagaggtggaaaaggagagaa
aggaaatccagggaactgctcatgtgggcttggtccttgtggtccacctggcaaacaagg
tctaccaggaatacctggcagaaaaggagaaatgggaacacctggaaaatatggaagaaa
aggtgatcccggttttcttggtagaagaggagaaccaggacccttaggattgccaggtcc
atttggactgacaggtgaaaaaggagataaaggtgacccagttgaagtaagaatcaaagg
ggtaaagggacaaagaggtgttccagggacacatggatttccaggaataaacggcactgc
tggcagggctggagatggaggattgccgggtgataaagggtctcaaggagaagatggaag
agctatacaaggtgagaaaggatttcctggagaccctggaattcctggctcaagaggtca
aatggggacaccaggttttgggattcagggcccacaaggcgtctcaggcctacccggaga
tccaggaaaccctggtttgaaaggaacatctggaccaaatggtcaaaaaggtattactct
tccaagtggaagaacatatcccggaaatccaggtataccaggatttaaaggtataccagg
tccaaaagggttaagaggtccacctggcccacccggctccaacggttttgatggtttcaa
aggccagaagggtagactaggaacatcaggcaatcctggtccagaaggtgtaagtggtga
gactggtgatccaggtgatccaggtgaacaaggttcaagtctggatggccctcctggatt
gccaggctttcctgggcttcaaagtccaaaaggtgttccaggtgacaccacccacagccc
tccaggtaccccaggcaacagaggtcttccagggctaccaggtttaccaggtctaagtgg
tgaccctggttttcctgggcttcaagggcaagttggcacaccaggacttccaggagctaa
aggtctccaaggccaaaaaggtgacacaggagtgatgggttatcctggatcacctggact
ggcctgtgagaaaatgttggaggggctaccaggaccatcaggctcttttggagcacaagg
acctaaaggattgaagggtattaaaggtcctggaggagatgtaggagaaccaggcccagc
tggaatgaaaggattgccaggtggtcctggaacccaagggccatccggctttccaggttt
acgaggagatccaggattttcagggggaaatggcctgccaggtcttccaggaacaaaagg
agacaaaggatcccaaggcatgcaaggtttcccaggcctcccaggaaatgcaggagaaat
gggagcatcaggtgtaaaaggagaagaaggacacattggtctgtctggtcctcctggaga
atttgggagaaagggttccaaaggtgaaccaggatcaccaggggacaagggcagcatcag
tgtcctgcaagtaaaaggacaaaatggagaaccaggccttcctggtgatgagggattacc
aggggtccaaggtgataaaggcaatgctggattcagaggaatcccgggaccaccaggcaa
acaagcagctccaggcactcaaaagggccagcctggcgatgaaggacactctggttccca
gggctcactaggtcccccagggccttcaggtgtggcaggggtaattggttttcaaggaca
aaaaggtgatcagggtgcacagggaccatcaggtcctcctggacatccaggattaggtgg
ccaaaaaggatcaaaaggtggcagaggtgacccagctactcattatggtcaacctggcaa
gaaagggcctataggggtccaaggatcaccaggacttcctggattacctggagatcaagg
tatgccaggtgttcaaggagaatcaggaaaacagggttccaaagggttgcctggaaatgt
aggatcacctggattcccaggtgtgcagggagcagcaggatttccaggacctccaggtga
acaaggtagacctggttttttgggaactccaggtttcccaggattacctggtaccccagg
tagaaaaggcttattgggatcacctggagtaaatggtgtaaatggacaaaaaggtcaaaa
gggtttgtcaggacccccaggtttaagtaaaatgggacctccagggtgcataggagaaca
agggccaaaaggtaacagaggagaacctgggcttccaggaagtactcaactaggtcccca
aggagagaaaggtctaagaggtcctcctggtaagccaggtgtttctggttctgctggccg
tatgggtcagtctcctgaaaatagaacttgtggctttccaggagaccaaggcccggctgg
ggcagatggcattagaggccctccaggcaatcctgggcctccaggaaaaattatacttat
gaaaggagatccaggggactctggtactttgggcccccctggcgttcctggtccatgtgg
taaacagggaactaagggtattccaggaaaccaaggaagaaaaggctcaaaaggtctaat
ggggaagcctggtctgcaaggatcacctggtgtccctggggagcctggggctcaaggtct
tcagggcccaactggtcctgtgggccataaaggttacagaggggacccaggagaacctgg
aagagttgattattcatcatgtcctaagattccagggcctcctggagtattaggcccacg
aggaccaccaggctttgtaggattaagagggccaattggctttcctggacctccaggaaa
taaaggagaagaaggttcattaggtgagcaagggctagaaggctcgctcggaccactagg
acctcatggtgatcaaggtgacatgggagaaaaaggaaacacggggtcacaaggtccttc
aggccaaactgggattccagggccaccaggatcagcatccaaatggagtagtgggttcct
gcttgttttgcatagtcagtcagaaacagaaccgttttgccctgagggaatggcaagatt
atggactggatacagcctgctatattttgaagggcaggaaaaagctcataatcaagacct
tggtctggctggatcctgtcttcctgtgtttagcactatgccttttacctattgcaatgt
caacgaagtctgctactacgcaagtcgaaatgataaatcttactggctttcaagtgcagc
tcctttgcctatgatgcccctctcagatgaagaaatacagccctatattagtcgatgtgt
agtatgtgaagctcctgcccaagccgttgcagttcatagtcaagatcaatccattccttc
ttgtccaccaaactggagaagtctttggataggttactcattcttaatgcatacaggatc
tggtgaccaaggaggcgggcaatccctcacgtcacctggaagctgcctagaggacttccg
atcagcaccctttattgaatgccagggtcagcaaggaacatgtcacttttttattaatga
atacagtttctggctagttacagtgaacaatgagacacagttttcatcatctcctctctc
agggactatcaaagatgaacaagaacaacggcaaaatattggcagatgtcaggtttgcat
gaaatatgcctag
DBGET
integrated database retrieval system
