Protobothrops mucrosquamatus (Taiwan habu): 107286799
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Entry
107286799 CDS
T05763
Symbol
HMGB1
Name
(RefSeq) high mobility group protein B1
KO
K10802
high mobility group protein B1
Organism
pmur
Protobothrops mucrosquamatus (Taiwan habu)
Pathway
pmur03410
Base excision repair
pmur04140
Autophagy - animal
pmur04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
pmur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
107286799 (HMGB1)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
107286799 (HMGB1)
09143 Cell growth and death
04217 Necroptosis
107286799 (HMGB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmur03036
]
107286799 (HMGB1)
03400 DNA repair and recombination proteins [BR:
pmur03400
]
107286799 (HMGB1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmur04147
]
107286799 (HMGB1)
Chromosome and associated proteins [BR:
pmur03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
107286799 (HMGB1)
DNA repair and recombination proteins [BR:
pmur03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
107286799 (HMGB1)
MMR (mismatch excision repair)
Other MMR factors
107286799 (HMGB1)
Exosome [BR:
pmur04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
107286799 (HMGB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box_2
HMG_box
HMG_WDHD1
RNA_pol_3_Rpc31
NOA36
DUF4667
HMG_box_5
Motif
Other DBs
NCBI-GeneID:
107286799
NCBI-ProteinID:
XP_015670710
LinkDB
All DBs
Position
Unknown
AA seq
215 aa
AA seq
DB search
MGKGDPKKPRGKMSSYAYFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF
EDMARADKVRYEREMKSYVPPKGESKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL
SIGDVAKKLGEMWNNTSSEDKQPFEKKAGKLKEKYEKDIAAYRAKGKPDAAKKVAPKPEK
SKKKKEEEDDDDDDDEEDEEEEEEEEEEEEEEDDE
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaggtgatcctaaaaagccaagaggtaaaatgtcctcatatgcctattttgtg
caaacctgccgggaagagcacaagaagaaacacccagatgcttcagtgaatttctcagag
ttctcaaagaaatgttccgaaaggtggaagactatgtccgctaaagaaaaggggaaattt
gaagatatggcacgagctgacaaggttcgttatgaaagagaaatgaaaagttatgtgccc
ccaaaaggagagtcaaaaaagaaattcaaggatccaaatgcaccaaagaggcctccttcg
gcatttttcttattttgttctgagtatcgtccaaaaatcaaaggagaacatcctggtctt
tccattggggatgttgcaaagaaacttggagagatgtggaataatacctcttcagaggat
aaacagccctttgaaaagaaggctggtaaactgaaggagaaatatgaaaaggatattgct
gcataccgagctaagggaaagcctgatgcagccaaaaaggtagctcctaagcctgagaaa
agcaagaaaaagaaagaggaggaagatgatgatgatgatgacgatgaagaggacgaggag
gaagaagaggaagaagaagaggaggaggaggaggaagatgatgaataa
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integrated database retrieval system
