Protobothrops mucrosquamatus (Taiwan habu): 107287175
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Entry
107287175 CDS
T05763
Symbol
PAN3
Name
(RefSeq) PAN2-PAN3 deadenylation complex subunit PAN3
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
pmur
Protobothrops mucrosquamatus (Taiwan habu)
Pathway
pmur03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmur00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107287175 (PAN3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmur03019
]
107287175 (PAN3)
Messenger RNA biogenesis [BR:
pmur03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107287175 (PAN3)
mRNA degradation factors
3'-5' decay
Pan complex
107287175 (PAN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pan3_PK
zf-CCCH
zf_CCCH_4
zf-CCCH_4
Pkinase
Torus
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
107287175
NCBI-ProteinID:
XP_015671136
LinkDB
All DBs
Position
Unknown
AA seq
958 aa
AA seq
DB search
MNSGGLPCSSPVAPAAAVIGPPPGPGVPTAAAVVAAAPGGLKLKFCRYYAKDKTCFYGEE
CQFLHEEPGGASAACPGPPPPVALGGLPLGLPPGSAAPSVAASPGHGGSGGYPAHGVAAP
GAGPKKPPELLGGGGGAGGGGGGGLDGPRLATSNQVLLVKCFDLEQLPTVKRKKGVYYMY
TTKLLFKLPDRNVNLYAVGGKDLPLKYFFFLLPLVPGIDGSALAEASLTDSYFSTSFVGV
NGFGSPAESKYPMMQRMTNSSSSPSLLNDSAKPYAGHDPLSSPSSSLFNDFAALSLSQRR
KPRKYRLGMLEERIVPVGSKARKSKNTIGCLADRCKTGVPVNMVWWNRVTENNLQTPNPT
ASEFIPKGGSNSRLGNMSQSNISAFSQALFSHPSMGNPANPGLAPGMSLSAGSSPLHSPK
ITPHTSPAPRRRSHTPNPANYMVPTSASTPVTNAVSQPPTTGQVIQKETVGGTTYFYTDT
TPAPLTGMVFPNYHIYPPTAPHVAYMQPKANAPSFFMADELRQELINRHLITMAQIDQAD
MPAVPTEVDSYHSLFPLEPLPPPNRIQKTSNFGYITSCYKAVNSKDDLPYCLRRIHGFRL
VNTKCMVLVDMWKKIQHSNIITLREVFTTKAFGEHSLVFAYDFHAGGETMMSRHFNDPSA
DAYFTKRKWGQHDGPLPRQHAGLLPESLIWAYIVQLTSALRTIHTAGLACRVMDPTKILV
TGKTRLRVNCVGVFDVLTFDNSQNNPLALMAQYQQADLISLGKVVLALACNSLAGIQREN
LQKAMELVTINYSSDLKNLILYLLTDQNRLRSVNDIMPMIGARFYTQLDAAQMRNDVIEE
DLAKEVQNGRLFRLLAKLGTINEKPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGTPW
IDLSHIISCLNKLDAGVPEKISLISRDEKSVLVVAYSDLKRCFENTFQELIAATNGQL
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atgaacagtggcggcctcccctgctcctctccggtggctcctgccgcggcggtaataggg
ccgccccccgggccgggagttccgacggcggcggcggtggtggcggcggcccccggcggg
ctgaagctcaagttctgccgctactatgccaaggacaagacgtgcttttacggcgaggaa
tgccagttcctgcacgaggagcccggcggagcttccgccgcctgtcccggccctccgcca
ccggtcgccctcggtgggcttccgcttgggctccctcctggctccgctgctccttctgtg
gctgcctcgccggggcacggcggtagcggtggctatccggcacacggggtggcggcgccg
ggagcggggcctaagaaaccccccgaactgctgggaggaggcggaggagccggcggcggc
ggcggcggggggctggacggaccccggctagccacttctaatcaagttctgttagtgaaa
tgctttgatctagagcagcttcccacagtgaaaaggaagaagggagtttattatatgtat
actacaaagctgcttttcaaacttccagatagaaatgtaaatttgtatgctgttggagga
aaagatctgcctttaaaatacttttttttccttttacctctagttccgggtatagatggg
agtgccctggctgaagctagtcttacagactcctatttcagcaccagttttgttggagtc
aatgggtttggaagtcctgcagaatcaaaatatcctatgatgcagaggatgacaaatagc
agcagttcacctagccttctcaatgacagtgccaagccatatgcaggccatgatcctctt
agttctcctagttcatccttgtttaatgattttgctgccctcagcttatctcaaaggaga
aaaccaagaaagtatcgactggggatgctggaagagaggatagttccggtgggatcaaag
gcacggaaatcaaagaacactattggctgcttggctgacaggtgtaaaacaggagtaccc
gtcaatatggtttggtggaacagagtcacagaaaacaatttacagacgccaaatcccact
gcaagtgagtttattcctaaaggaggatcaaactcccgacttggtaatatgtcacagtcc
aatatctctgccttctctcaagccttgttctcccatccttccatgggaaatcctgcaaat
cccggattagctccaggaatgtcactgtcagcaggatcttcacccctccattctcctaaa
atcactcctcatacatctcctgctcctagacgaagaagtcatacaccaaacccagcaaat
tatatggtgcctactagtgcctctacaccagttactaatgctgtctcacagccccccaca
actggccaagtgattcagaaagaaactgtgggtggaacaacctatttctatactgacaca
actccagcacctctaactggaatggtattcccaaattatcatatttaccctccaaccgca
cctcatgttgcttatatgcaaccaaaagctaatgcaccttccttcttcatggctgatgaa
ctcagacaggagctgatcaacagacacttaattacaatggctcagatagatcaagcggac
atgcctgctgtcccaacagaagttgacagctaccacagccttttccctttagaaccactg
ccaccacccaatcggatacagaaaacaagcaactttgggtacataacatcatgctacaaa
gctgtaaatagcaaagatgatctgccatattgccttcggaggatacatggttttcgtctt
gttaatacaaaatgcatggtattagttgacatgtggaaaaaaatccagcattcaaatatt
ataacattgcgagaagtgttcaccactaaagcatttggagagcattctcttgtgtttgca
tatgatttccatgctggaggagagactatgatgagcaggcatttcaatgatcctagtgct
gatgcctacttcacaaaacggaagtggggtcagcatgatggacctctgccccgacaacat
gcagggttgctgcccgagtccctgatttgggcctatattgtgcagcttacctcggcattg
cggactattcatacagcaggattggcctgtcgagtaatggatcccacaaagattctggtg
acaggcaaaacaaggttgagagtgaattgcgttggagtctttgatgtattaacatttgat
aacagccaaaataatcctttggctctaatggcccaatatcagcaagcagatttgatctct
cttgggaaggttgtgctggctttggcttgcaattctttggcaggaattcagagagagaat
ttgcagaaagcaatggaactggtgacaatcaactattcgtcggatttgaagaatcttatt
ttatatttgctgactgaccaaaacaggcttcgaagtgtaaatgatatcatgcctatgatt
ggtgcaagattctatactcagttggatgctgcccaaatgaggaacgatgttatagaagaa
gatcttgcaaaggaagttcagaatggaagattatttcgtcttcttgcaaaattgggaaca
atcaatgaaaaaccagagttccagaaggatccgacatggtcagaaactggagacaggtat
ctcctgaagctttttagggatcatcttttccatcaggtgacagaagcgggtactccttgg
attgatctcagtcacattatctcttgtcttaacaagttggatgctggtgtgccagaaaaa
ataagcctcatttccagagatgagaagagtgtccttgtagtggcatatagtgacctaaaa
cgctgctttgaaaatacttttcaggaactgattgcagccacgaacggccagttgtag
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