Protobothrops mucrosquamatus (Taiwan habu): 107287313
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Entry
107287313 CDS
T05763
Symbol
TNR
Name
(RefSeq) tenascin-R
KO
K06252
tenascin
Organism
pmur
Protobothrops mucrosquamatus (Taiwan habu)
Pathway
pmur04510
Focal adhesion
pmur04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pmur00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107287313 (TNR)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107287313 (TNR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pmur00536
]
107287313 (TNR)
Glycosaminoglycan binding proteins [BR:
pmur00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107287313 (TNR)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_Tenascin
Pur_ac_phosph_N
Tor_FN3_3nd
EGF_2
Interfer-bind
CBM_4_9
TSC22
Bim_N
Lzipper-MIP1
Motif
Other DBs
NCBI-GeneID:
107287313
NCBI-ProteinID:
XP_015671298
LinkDB
All DBs
Position
Unknown
AA seq
1355 aa
AA seq
DB search
MRADGKNVILRNVVVSLNVMLLAIFRPFECRLEVMTERAKKQVTDEEGSFANYTSPVKEQ
PMVFSHIYNINVPLDSLCSSSLEASSDPEVSSEDDRMTEYTEQTSDSESQVTFTHKINLP
KQTCKCAASSRDIQELLSRIEMLEREVSILRDQCNSNCCQENAATGQLDYLPHCSSHGNF
SLETCGCICDEGWAGKNCSEPLCPLGCSSRGVCIDGQCVCDSDYSGEDCSEAHCPTDCSS
RGLCVDGECICEEGFAGEDCNELRCPEDCSGKGICANGTCICQEGYVGEDCGQLRCLNAC
SGRGFCQEGLCSCEEGYQGRDCSAVAPPESLQVAAVRDRSIDLEWDGPMAVTEYVISYQP
AVPGGLQLQQRVPGDWTTVTLKELEPGLTYNISIYAVISEVLSAPLGVKVATQLSTPRGL
QFKTITETTVEMEWEPFSFPFDGWEISFIPKDNEGGVIAQLPSSVTTFNQTGLKPGEEYT
VNVVALKEQARSSPTSASVSTLIDGPTQILVRDISDTVAFVEWSPPRAKVDYILLKYGLE
NEEGGKTTFRLQPPLRQYSMQALRPGSPYEVSISALRGANESDAAITHFVTEIDAPKNLR
ILSRTSDSLGLEWDNSEAEVENFKLVYSTLAGEQYHEVLVPRNAGAMSKATLTDLVPGTE
YGIGISATMNSKQSVPATMNARTELDSPHDLIVTASTETSISVSWTKVKGPIDHYRVIFM
QASGMASEVTISKDKSELTLTDLEPGTEYTISVIAERGRQQSLESTVDAFTGFRPITQLH
FSRVTSSSVNITWNDPSPPADRLILTYSPKDKKETKEVMLDPTKRHAALSGLQPSTEYIM
SLVAVHGLVSSEPIVGSVTTEIDSPKNLTIVNVTTESVTVHWAPPIAPFDHYKISCKSAQ
GRIDSIVVAKGITEYTLNYLQPSTEYEISLKSIKGREESEPLLHTMYTAMDHPKNLIAIN
ITPTETLLKWDPPGVEAENYVIVLTHDSVAGETILVDRTEKEYKLINLLPSTSYKVTLYA
INGPVTSRTIFTNFTTLLDPPSNLTANEVTRRSALLSWFPPVAEIENYIMTYRSPDGSRK
ELIVDAEDTWIRLEGLSENTEYTVRLQAAQDAVRSGFISTIFTTGGRVFMNPQDCTQHLI
NGDNLSGIYTISLNGDLSQRVQVYCDMTTDGGGWIVFQRRQNGLTDFFRKWADYRIGFGN
LEDEFWLGLDNMHKITSQGRYELRIDMRDGQETTYAYYDKFSIGDARSLYKLRIGEYNGT
AGDSLSYHQGRPFSTKDRDNDVAVTNCAMSYKGAWWYKNCHRTNLNGKYGESRHSQGINW
YHWKGHEFSIPFVEMKMRPYNHRNSLGRKRRSVQL
NT seq
4068 nt
NT seq
+upstream
nt +downstream
nt
atgagggcagatggcaaaaatgtgatcctaagaaatgtggtggttagcctcaatgtaatg
ctgttggccatcttcagaccctttgaatgccgcctggaagtgatgacagagagagctaaa
aaacaggtgaccgatgaagaaggcagctttgctaactacacatcccctgtcaaagagcaa
cccatggtcttcagtcacatatacaacattaatgtgcctctggacagcctctgctcctca
tccctagaggcttcatctgacccagaggtgagttcggaagatgaccggatgacggaatac
accgagcagacctcagacagtgagagccaggtcaccttcacccacaagataaacctcccc
aaacagacttgcaagtgtgccgcctcctcccgggacatacaggagctgctgagcaggatt
gagatgctggaaagggaggtgtctatactccgagaccaatgcaactccaattgctgtcaa
gaaaatgcagccacagggcagctggattacctcccccattgcagcagtcatggtaacttt
agcctggaaacctgtgggtgcatctgcgatgaaggctgggctgggaagaattgctctgag
cctctctgtcccctcggctgctctagccggggtgtgtgcattgatggccagtgtgtttgc
gacagcgattatagtggtgaggattgctctgaggcacattgcccaactgactgcagctcc
cgaggactctgtgtggacggagaatgtatctgtgaagaaggctttgctggagaagactgt
aatgagcttagatgcccagaggactgctcggggaaagggatctgtgccaatgggacttgc
atctgccaagagggctacgtaggggaagactgtgggcagctgaggtgcctcaacgcttgc
agtgggcgtggattctgccaagaaggcctgtgctcctgcgaggaaggttaccaaggacgg
gattgttcagcagttgctcctccagagagtctgcaagtggctgcagtcagagaccgatca
attgacctggaatgggatggcccaatggctgtgactgaatatgtcatttcctaccagcca
gcagtgccagggggcctgcagctccagcagcgagtgccgggcgactggaccactgtcact
ctgaaagagttggagccaggactgacatacaacatcagcatctatgctgttatcagtgaa
gtgctcagtgcccctcttggagtcaaggtagccacccaactctctactccacgaggactg
cagttcaaaactatcacagagaccactgttgagatggaatgggaacccttctcttttccc
tttgatggctgggagatcagcttcatccccaaggacaatgaagggggtgtgattgctcaa
cttcccagtagtgtgacaactttcaatcagaccggcctgaaaccaggtgaggagtacaca
gtcaatgttgtagctctcaaggaacaagcccgaagttcacccacttcagccagcgtttca
accttaattgatgggcccactcagattttggttcgtgatatttctgacactgtggctttc
gttgaatggtctccaccccgggctaaagtggactatattctactgaaatatggcctagag
aatgaggaaggaggaaagaccactttccggttgcagcctccactgaggcagtattccatg
caagctttacgacctggttccccatacgaagtttctatctcagctctccgtggtgctaat
gagagcgatgctgcaatcacccactttgtaacagaaattgatgctccgaagaatttacgc
atactctctcggacatcagacagcctaggccttgagtgggacaacagtgaggcagaagtg
gaaaacttcaaattggtatatagcactctggctggtgagcagtaccatgaagttttggtg
ccgcgcaatgcaggtgccatgtccaaagccacccttactgatttggtgccaggaacagaa
tatggaattggaatttcagctacaatgaatagtaagcagagtgttccagccaccatgaat
gcaagaactgagctggacagccctcatgacctgattgtgacagcttccacagaaacatcc
atctctgtgtcctggaccaaagtcaagggtcccattgatcattatcgggtcatcttcatg
caagcttcaggaatggcatcagaggttactatctctaaagataagtctgagcttacactc
acagacttagaacctgggactgaatacactatctcggtcattgctgaaagaggccgacag
caaagcttggaaagcactgtggatgccttcacaggattccgaccaatcacacaacttcac
ttttctcgtgtaacttcctccagcgtgaacatcacttggaatgacccctcacctccagca
gataggctgatactgacctacagccccaaagataagaaggaaaccaaggaagtgatgctg
gaccctacaaagagacatgctgctttgtcaggtctacaaccatccacagaatatatcatg
tctctggtggctgtacatggccttgtcagctctgagccaatagttggttcagtcacaaca
gagattgattcaccgaagaacttgacaattgtcaatgtgactacagaatctgtgactgtc
cattgggcacctccaattgcaccttttgaccactataagatttcctgcaaatctgcccaa
gggcgaattgacagtatagttgtcgcaaaaggcattactgaatatactctcaactacttg
cagccttcaactgaatatgaaatcagcctaaagagtataaagggcagagaggaaagtgaa
ccacttttacataccatgtatacagccatggatcatccaaagaatttgattgccataaat
attaccccaacagaaaccttgctaaagtgggacccgcctggcgttgaagctgaaaattat
gtcattgtacttacccatgacagtgttgccggagaaactattttggtggacaggaccgaa
aaagaatataagcttatcaatttgcttcccagtaccagctataaggtcacactgtatgct
atcaatgggcctgtcacaagcagaaccatcttcaccaactttactactcttttggatcca
ccatcaaatctgacggcaaatgaagtgactcggcgaagtgctcttctttcatggtttcct
cctgtagctgagattgagaactacatcatgacatacagatctcctgatgggagccgcaag
gagctgattgtggatgcagaagatacttggatccgcctagaaggtctttctgaaaacaca
gagtacactgtgcgcctgcaagcagctcaagatgctgtgaggagtggatttatctccacc
atcttcactacaggaggccgtgtgtttatgaatcctcaggactgtacccagcatttgatc
aatggcgacaatttgagtggcatttacaccatttcccttaatggggatctcagccagaga
gtacaagtatactgtgatatgactacagatggcggtggatggattgtcttccagagaaga
cagaatggattgactgatttctttcgcaaatgggcagactatcgcattggctttggaaac
ctggaggatgagttctggctggggctagataatatgcacaagatcacatcacaagggcgc
tatgaactgcggatagatatgagagatggtcaagaaacaacttatgcctattatgacaag
ttttccattggagatgccagaagtctctacaagctccggataggggaatataatggcact
gctggggattcactcagctatcatcagggacgtccattttccaccaaagacagagacaat
gatgttgccgttacaaactgtgctatgtcatacaaaggggcctggtggtataaaaactgc
catcgaactaacctcaatggtaaatatggcgaatcccgacacagccagggtattaactgg
tatcattggaaaggacatgagttctccataccttttgtggaaatgaaaatgcggccgtat
aaccatcgcaactccctggggaggaaacgccgatcagtgcaactgtga
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integrated database retrieval system
