Protobothrops mucrosquamatus (Taiwan habu): 107287629
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Entry
107287629 CDS
T05763
Symbol
CPSF3
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
pmur
Protobothrops mucrosquamatus (Taiwan habu)
Pathway
pmur03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmur00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107287629 (CPSF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmur03021
]
107287629 (CPSF3)
03019 Messenger RNA biogenesis [BR:
pmur03019
]
107287629 (CPSF3)
Transcription machinery [BR:
pmur03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
107287629 (CPSF3)
Messenger RNA biogenesis [BR:
pmur03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
107287629 (CPSF3)
U7-dependent histone pre-mRNA processing factors
107287629 (CPSF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
Motif
Other DBs
NCBI-GeneID:
107287629
NCBI-ProteinID:
XP_015671639
LinkDB
All DBs
Position
Unknown
AA seq
692 aa
AA seq
DB search
MSARRRTEAFVPAEESDQLLIRPLGAGQEVGRSCIVLEFKGRKIMLDCGIHPGLEGMDAL
PYIDLIDPAETDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKV
SNISADDMLYTETDLEESMEKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVK
LLYTGDFSRQEDRHLMAAEIPNIKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRG
GRGLIPVFALGRAQELLLILDEYWQNHPELHEIPIYYASSLAKKCMAVYQTYVNAMNDKI
RKQININNPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVI
IAGYCVEGTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPH
VILVHGEQNEMARLKAALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGSLADK
KPEQGQRVSGILVKRNFNYHILSPCDLSNYTDLAMSTVTQTQAVPYTGTFSLLHYHLQKL
TGDIKEIEVQDKPALKVFKNITVVQEPGMVVLEWVANPANDMYADTVTTVILEIQSNPKV
HKAMMCKIPKKEEIEDYHKKMEIMLQDIFGEDCVSTKKDNVLSITVDGKTANLSLDTRTV
DHEPGCEDDDETLREMVELAAQRLYDAITPIQ
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgaggaggagaaccgaagccttcgtgccggccgaggagagcgaccagttgctg
attcggcccttaggtgctgggcaggaagtaggaagatcatgtattgttttggaatttaaa
ggaaggaagataatgcttgactgtggaattcaccctggcttagaaggaatggatgctctt
ccttacattgatcttatagatccagctgagactgatctcctcttgataagtcatttccat
ttggatcactgcggggcattgccatggtttctacaaaaaacaagctttaaaggaagaact
ttcatgacccatgctacaaaagcaatttatagatggctgctctcagattatgtcaaagtc
agcaatatctctgcagatgatatgctgtacacagagaccgacctggaagaaagcatggag
aaaattgaaacaataaactttcatgaagtaaaagaggtggctggcatcaaattctggtgt
tatcacgctggacatgttctgggagcagccatgtttatgattgaaatagccggagtgaag
cttttatacacaggtgacttctcaagacaagaagacaggcatttgatggcagccgagatt
cccaatattaagcctgatattcttatcattgaatcaacatatggtacccatatccatgag
aaacgggaggagcgagaggctcgattctgtaacactgtacatgatattgtaaacagagga
ggaagaggcctcattcctgtgtttgctttgggaagagctcaagaattgcttttgattttg
gatgaatactggcaaaatcaccctgaactgcacgagatacctatatactatgcttcttcc
ctggccaagaagtgcatggcggtgtatcagacctacgtcaacgccatgaatgataaaatc
cgcaagcaaatcaatatcaacaacccatttgtattcaagcatattagtaatctgaagagc
atggatcattttgatgacattggccccagtgtggtaatggcttcccctggcatgatgcag
agtggcttatccagagaattatttgagagctggtgcactgacaagagaaatggagtcatc
atagcaggttattgtgtggaaggaacacttgctaagcatatcatgtctgagcctgaagaa
attacaacaatgtcaggacagaagctaccactgaagatgtctgtggattacatttctttc
tctgctcacacagattaccagcaaaccagcgagtttattcgggcactcaagcccccccac
gtgatattggtgcatggtgagcagaatgaaatggccaggctgaaagctgccttaatacgt
gaatatgaagataacgatgaagttcacatagaggtccacaatcctagaaataccgaagct
gtgactctaaattttagaggagaaaaacttgccaaggtaatgggttctctagctgataag
aaaccagaacagggacagcgagtttcaggaatactagttaaaagaaactttaactatcat
attctttctccttgtgatctgtccaactacacagatcttgccatgagcactgtgacacag
acacaagctgttccatacacaggcacattcagtctgcttcattaccatctgcaaaaatta
acaggggacataaaagaaatagaagtccaggataagccagccttgaaagtttttaaaaac
attactgtggtccaagaaccaggcatggtggtgcttgagtgggtagcaaatcctgccaat
gatatgtatgcagataccgtaacaacagtgattctagaaattcaatcaaatcccaaggtt
cacaaagcaatgatgtgtaaaattcccaaaaaagaagaaatagaagattatcacaaaaaa
atggaaattatgcttcaggacatatttggagaagactgtgtaagtacaaaaaaggataat
gtactcagcattactgtagatggaaaaacagcaaatctttcgttggatacacggactgtt
gatcatgaaccaggatgtgaggatgatgatgaaactcttcgggaaatggtcgagctggct
gcacagcgactttatgatgctatcactcctatacaataa
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