Protobothrops mucrosquamatus (Taiwan habu): 107287810
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Entry
107287810 CDS
T05763
Symbol
DDX1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
pmur
Protobothrops mucrosquamatus (Taiwan habu)
Brite
KEGG Orthology (KO) [BR:
pmur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmur03041
]
107287810 (DDX1)
03016 Transfer RNA biogenesis [BR:
pmur03016
]
107287810 (DDX1)
Enzymes [BR:
pmur01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107287810 (DDX1)
Spliceosome [BR:
pmur03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
107287810 (DDX1)
Transfer RNA biogenesis [BR:
pmur03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
107287810 (DDX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
SPRY
Helicase_C
ResIII
CMS1
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
107287810
NCBI-ProteinID:
XP_015671843
LinkDB
All DBs
Position
Unknown
AA seq
740 aa
AA seq
DB search
MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQQEGKKGKTTIKTGGGVLNKWQMNPYDRGNAFAIGADGLCCQSREIKEWH
GCRSTKGVIKGKYYYEVSCRDQGLCRVGWSSLQASLDLGTDKFGFGYGGTGKKSHNKQFD
SYGEEFTMHDTIGCYIDADKGQISFSKNGKDLGLAFEIPQNVKNQALFPACVLKNAELKF
NFGEEDFKFPVKDGFTAIDKAPEGNAVKSQHTGSAQVAQTKNLPNAPKALIVEPSRELAE
QTLNNVKQFKKYVENPKLRELLIIGGVAAREQLSVLEQGVDIVVGTPGRLDDLVSTGKLA
LSQIRFLVLDEADGLLSQGYSDFINRIHSQIPQITSDGKRLQVIVCSATLHSFDVKKLSE
KIMHFPTWVDLKGEDSVPESVHHVVVPVNPKTDKQWERLGKNHIRTDEVHAKDNTRPGTN
SSEMWSEAIKILKGEYAVRAIKEHKMDQAIVFCRTKIDCDNMEQYFIQQGGGPDKKGHQF
SCVCLHGDRKPHERKQNLERFKKAEVRCLICTDVAARGIDITGVPYVINVTLPDEKQNYV
HRIGRVGRAERMGLAISLVAAEKEKVWYHSCPSRGKSCYNTRLKDEGGCTIWYNEMQLLG
EIEEHLNCTITQVEPDIKVPVDDFDGKVTYGKRRAAGGGTYKGHVDILAPTVQELAALEK
EAQTSFLHLGYLPNQLFRTF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgttttcagaaatgggtgttatgccagaaatagctcaagctgtagaagaaatg
gactggcttctgcctacagatatccaagcggagtccattccattgattttaggaggaggc
gatgtactcatggctgcagaaactggaagtggaaaaactggtgcattcagcatcccagtt
attcaaattgtttatgaaacactgaaagatcaacaggaaggaaaaaagggtaaaactact
attaaaactggtggaggagtgctcaacaaatggcagatgaatccctatgacagaggaaat
gcatttgctattggagctgatggtctgtgctgccaaagcagggaaataaaagaatggcat
ggatgtcgatcaactaagggtgtaattaaaggaaaatattattatgaagtatcctgtcgt
gaccagggtttgtgcagagttggatggtcctctttgcaagcttcattagatttgggcact
gataaatttggctttggctatggtggaaccggaaagaaatctcataacaaacagtttgat
agttatggggaggaattcaccatgcatgacacaataggttgttatattgatgccgataaa
ggtcaaatttcattttcaaaaaatggaaaggatcttggacttgcatttgaaattccacag
aatgtaaaaaaccaggcactctttccagcttgtgtcctaaagaatgctgaattaaaattc
aactttggtgaagaggactttaagtttccagtcaaagatggcttcactgctattgataaa
gctcccgagggtaatgctgtgaagtcccagcacacaggaagtgcacaagtagcacagacc
aaaaatttaccaaacgctcccaaagctttgattgtggagccatccagagagttagcagag
caaactctgaacaatgtgaaacaattcaaaaaatacgttgaaaatcctaaattaagggaa
ctcctgattattggtggtgttgctgcaagagagcagctctccgtattggagcaaggggtg
gacatagttgttggaactccaggaagactggacgatcttgtttcgactggaaaattggct
ttatctcaaattaggttcctagtgcttgatgaggcggatggcctccttagtcaaggttat
tcagatttcatcaaccgcattcattctcagattcctcagataacttctgatggaaagagg
ctgcaggtcattgtgtgttctgcaactctgcattcatttgatgtaaagaagttatctgag
aagattatgcacttccccacttgggtagatttgaaaggcgaggattctgtcccagaaagc
gtgcaccatgttgtggttcctgtgaaccccaaaactgacaaacaatgggagaggcttggt
aaaaatcacatcagaacggatgaggtgcacgcaaaggataatacaagacctggtacaaat
tcttcagaaatgtggtcagaggcaattaagattttaaaaggagaatatgctgttcgtgcc
atcaaggaacacaagatggatcaagcaatagtcttctgcagaacaaagatagattgtgac
aatatggagcaatactttatacagcaaggaggaggtccagataagaagggacatcagttc
tcatgtgtgtgcctgcatggagacagaaagcctcatgagagaaagcagaatttggagcgc
tttaagaaagcagaggtcagatgtttgatctgcacagatgtagcagctagaggaatcgat
atcactggtgtgccatacgttatcaatgtcacacttccggatgaaaaacagaattacgtt
catcggattggcagagtgggacgagctgagcgcatgggcctagcaatttccctggtggca
gcagagaaagaaaaagtttggtatcactcatgccccagtcgtgggaagagctgttacaat
actagactgaaggatgaaggtggttgcactatttggtacaatgagatgcagcttttaggt
gaaatagaagagcatctgaactgcaccattactcaggttgagccagatattaaagtccca
gtagatgattttgatggcaaggtcacctatgggaaaaggagagctgctggtggtggaaca
tacaaaggccatgtggacattctggcacctacagtgcaagagttggctgcccttgaaaag
gaagcccagacatctttcctgcatcttggttatcttcctaatcagctgtttagaacattt
tga
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