Protobothrops mucrosquamatus (Taiwan habu): 107288346
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Entry
107288346 CDS
T05763
Symbol
HELZ
Name
(RefSeq) probable helicase with zinc finger domain
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
pmur
Protobothrops mucrosquamatus (Taiwan habu)
Brite
KEGG Orthology (KO) [BR:
pmur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmur03019
]
107288346 (HELZ)
Messenger RNA biogenesis [BR:
pmur03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
107288346 (HELZ)
3'-5' decay
Other 3'-5' decay factors
107288346 (HELZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
zf-CCCH
AAA_19
ResIII
AAA_30
UvrD-helicase
PAM2
zf_CCCH_4
PhoH
AAA_22
Mov-10_helical
zf-CCCH_4
nSTAND_NTPase5
AAA_7
Bac_DnaA
AAA_16
AAA_14
MOV-10_Ig-like
Mg_chelatase
NAT10_TcmA_helicase
Motif
Other DBs
NCBI-GeneID:
107288346
NCBI-ProteinID:
XP_029140164
LinkDB
All DBs
Position
Unknown
AA seq
1887 aa
AA seq
DB search
MERSPPLSPPRSGHENYGKADEDCRHVLGEGLDREGDTFRAVLGCVHLKGKLQAVSNALS
NSLMGESLNGMVTKDLTRLKNLLVETEAAACKIPSVHHVEEVEEGCHDGWQFRPPPRGVT
SSEEYTLCKRFLEQGICRYGAQCTSAHSQDELTEWQKRYASRLIKLKQQKENKQCLGSYM
ESLIEKWMNSLSPEKVLSECLDGVRVEHNPELSVTVTTKKSYQMWTFAVTCKPARMLYRV
ALLYDAHRPHFSIMAISAGDSSTQIKQEVPETCQEWVGGKMAQNGTDHSVYKISVVFSTE
IFGTFRQTVVFDFGTEPVLMQRVMIDAASTEDLEYRMNARQQLLTTAKRWDSTSKTIVEF
EPNETTELDKSLLIRYQIPLSADQLFTQSVLDKSLTKSNYQSRLHDLLYIEEIAQYKEVS
KFNIKVQLQIVASFMLTGVSGGAKYAQNGQLFGRFKLTETLSEDTLAGRLVMTKVNAVYL
LPITKEKSGLTQGTKEKVYEAIIEEKTKEYIFLRISRDCCEELNLRADCEMQVELQFQLN
RLPLCEMHYALDRIKDNGILFPDVSMTPTIPWSPNRQWDEQLDPRLNAKQKEAVLAITTP
LSIQLPPVLIIGPYGTGKTFTLAQAVKQILQQQDTSRILICTHSNSAADLYIKDYLHPYV
EAGNPQARPLRVYFRNRWVKTVHPVVHQYCLISSTHSTFQMPQKEDILKHRVVVVTLNTS
QYLCQLDLEPGFFTHILLDEAAQAMECETIMPLALANKYTRIVLAGDHMQLSPFVYSEFA
RERNLHVSLLDRLYEHCPAEFPCRILLCENYRSHEAIINYTSELFYEGKLMASGKQPAHK
DFYPLTFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTP
YADQVFRIRAELRKKRLSDVNVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTAMKRKEHL
LEDSTEDLDYGFLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWERFIALCHDNE
SLHGITFDQIKAQLEALELKKTYVLNPLAPEFIPRALRQQHSSNTNKPQQSPPKVKSHHH
NHSDHFHTDGIVQPTASVLIGNPVRAYTPPPPPPPPPGPHPNLGKSPSPVQRIDPHTGTS
ILYVPAVYGGNMVMSVPLPVPWTGYQSRFAVDPRIITHQTAMAYNVNLLQAHGRGSPIPY
GLGHHSPVSIGQQQLHHSEKEQLELNRNSKNEPGAGPDISKIRTSEKNCLEAKQVDLEAN
SQNRSPESRSGSSYPNSKFHRKDNLNSRQLNIHLTPPQAQYAVPSRPFQHLAQISRHPYP
MPQQQNLLSQQQNHLSEQHNQMPPPQSQIVQQHNHLNQQPQPPPSQLSPAFQTGPNQSFF
KNPVPHRPHSPGADPSVLEQLPPSVLQDVSSPLRPIAQPNLMMPSHLNHFIEENPPGMSV
GEPLDRIHGNLALETLRQQQARLQQWNEHNAYLSQGNISYSHHHHPHLSHLSQQSMGLHQ
QPVRANWKLANNIEEETEATYSRFQDLLRELSHRDQTENRDLVEMPPPQSRLLQYRQVQP
RSPPALLSPTCNSNHSGHFPNFSESRDLEISNNPAFQQHLPQMYNPPFSVPSEHLTPPSL
KYLQPDGSWTYANLHQSHLMGQGFHYGIPPLPHRSQPNPFIQIQNHQHAVGQEPFHPLAS
RAVSASSLHSLEEYEPRGPGRPLYQRRMSSSSTQACSEGLNTPPDNVGQCQELQDQSNPS
SFNYSPPEWWVNSSSSAPYQNIPCNGSNRAIPPREQLVPPKTIKSPEEQMKVENIPLSSS
FNYNVLQHLGQFPPLMPNKQIVESNSNSQPSAGLNKPAMSYASALRAPPKPRPPPEQAKK
NSDPLSLFQELSLGSSSGSNGFYSYFK
NT seq
5664 nt
NT seq
+upstream
nt +downstream
nt
atggaaagatcccctcccctctcgccaccaagaagcggtcacgaaaactatggaaaggca
gatgaagactgtaggcatgtattgggagaaggactggacagggaaggggatactttccgt
gcagtgcttggctgtgtgcatcttaaagggaagctacaggctgtttctaacgctctttct
aactcactgatgggtgaatcactgaatgggatggtaactaaagatctgacaaggctgaaa
aaccttcttgttgaaacagaggcagcagcttgtaaaataccctcagtacatcatgtggaa
gaggtggaagaaggatgtcatgatggctggcaatttcgccctccaccccggggagtcaca
agtagtgaagaatacacattatgcaaaagatttttagagcaaggaatttgcagatatggt
gcacagtgtacttcagcacattcccaggacgagctgactgaatggcagaaacggtatgct
tcccgcttgataaagttaaaacaacagaaagaaaacaagcaatgtttgggaagttacatg
gaatccttaattgaaaaatggatgaattcattatctcctgagaaagtgctcagtgaatgt
cttgatggagtaagagttgaacataaccctgaactatcagttactgtcaccaccaaaaaa
tcatatcagatgtggacttttgctgttacatgtaagcctgcaagaatgctgtatcgagtg
gcactactttatgatgcgcatcgtcctcattttagtatcatggcaatatcagctggagat
agcagcacccaaataaaacaagaagtcccagaaacctgccaggaatgggttggaggaaag
atggcccagaatggaacagatcattcagtgtacaaaatcagtgtagtttttagtacagaa
atctttgggacctttcgtcaaactgtggtattcgattttgggactgaaccagttttgatg
caacgagtgatgattgatgctgcttcaacagaagatcttgaataccggatgaatgcacgt
cagcaactgttaaccacagccaagcgttgggattccacttccaagacaattgtagaattt
gagccaaacgagactactgaattggacaagagtcttctgatcagatatcagatccctctg
tctgctgaccagctatttacacagtctgtcttggataaatcattgaccaagagtaattat
cagtcacgactacatgatctcctttatattgaggaaatagcacagtataaagaagtcagc
aagtttaacatcaaagtgcagttgcagattgtagcaagcttcatgcttactggtgtttct
gggggtgcaaagtatgcccaaaatggacaactttttggacggtttaaactcactgaaact
ctttctgaagatactttggcagggcgactggtgatgaccaaagtcaatgctgtttattta
ttaccgatcactaaagagaagtcagggctgacccaaggaaccaaagagaaagtatacgaa
gcaattattgaagaaaaaacaaaggaatatatctttctgagaatatccagggactgctgc
gaagagctgaaccttcgagcagattgtgaaatgcaggtcgagcttcagtttcagttaaac
cgcttacccctctgtgaaatgcattatgccttggataggatcaaggacaacggtatcctg
tttccagatgtcagcatgacccccacaataccttggagtcccaacaggcagtgggatgag
cagttggatcctaggctcaatgcaaagcagaaggaggctgttctggccatcacaactcca
ctgtcaattcaactgcctccagtccttattatcggtccttatgggacgggcaaaaccttc
actttggctcaggcagtcaaacaaattctccaacagcaagacactagcaggattctcatt
tgcacccattctaatagtgctgctgatctctacataaaggattatttacatccatatgta
gaagcaggcaatccccaggcgagacctctcagggtttatttcagaaatcgttgggtaaaa
actgtccacccagttgtgcatcaatactgtttgatctcaagcacacattccacctttcag
atgccccagaaagaagacattcttaaacatcgagtagtagtggttactttgaatacttca
caatatctgtgtcagctagatcttgagcctgggttttttacacacattctgttggatgaa
gctgcacaggcaatggagtgtgagactattatgcctttagcactagcaaataaatataca
agaattgtcttggctggagaccatatgcagcttagtccttttgtgtacagtgaatttgcc
agagaaagaaatcttcatgtttcactacttgatcgtctttatgaacattgccctgcagaa
tttccatgcaggatcttgctgtgtgagaactatcgctcccatgaagctatcatcaattat
acttctgagcttttttatgagggcaaattgatggccagtggaaaacagcctgcacacaaa
gatttttatcctctgacattcttcactgcacgaggagaagatgtgcaagaaaagaacagt
actgctttttacaacaatgcagaggtatttgaagtagttgaacgtgttgaagaattgagg
aggaagtggccggtagcctggggaaagttggatgatggcagcataggtgttgtaacacca
tatgctgatcaagtgttccggattcgggcagagcttcggaaaaaaagattgtctgatgtc
aatgttgaaagagtgttaaatgttcagggaaagcagtttcgagtgttgtttctcagcaca
gtacgaacccggcacacttgcaaacacaaacaaacagcgatgaaacggaaagaacattta
ttggaagattcaacagaggacttagattatggttttctgtccaattacaaacttctcaac
acagccattacaagagcacagtccctagtagctgtggtgggcgatccaattgctttatgt
tccattggaagatgcaggaaattttgggaaagatttattgccctgtgtcatgataatgaa
agtcttcacggtatcacatttgatcagatcaaggctcagttggaagctctggaattaaag
aaaacctatgtattgaatccactggctcctgagtttattccacgggctctgcgacagcag
cattcatcaaacaccaataaaccacagcaatcgccaccaaaggtaaaaagccatcatcat
aaccatagtgaccattttcacactgatggaattgttcagccaactgcttctgtcttaatt
ggaaatcctgtcagagcgtataccccaccaccgccaccccctcctcctcctgggcctcat
cctaaccttgggaagtctcctagtcctgtacagcggatagatcctcacactgggacaagc
attctttatgtacctgctgtttatggaggaaatatggtcatgtctgtgcctttacctgta
ccatggacagggtatcagagtagatttgcagttgatcctcgaatcattactcatcaaaca
gccatggcatataatgtgaatcttttacaagcacatggacgtgggtcccccattccctat
ggtcttggacatcattcaccagttagtataggacaacagcagcttcatcattcagaaaaa
gagcaacttgaactaaatcgaaacagcaaaaatgagcctggtgctggaccggatatcagt
aaaattcggacatctgagaaaaactgtttagaagccaaacaggttgacttagaagcaaat
tcccaaaatagaagccccgaatcacgttccggttcttcttatcctaattctaaatttcat
cgcaaagataatcttaactccaggcagctgaacattcaccttactcctccccaagcccag
tatgctgttcctagccgccccttccagcatctagcccaaatttcaaggcatccatatcct
atgccacagcaacagaacctcttaagccaacaacagaatcatttgtccgaacaacataac
caaatgcctcctccgcagagccagatagtccagcaacacaatcatttaaatcagcagccg
caaccaccaccttcacagctctctcctgcctttcaaactggccccaaccagtctttcttt
aaaaatccggttccacatagacctcattcccctggtgcagacccttcagttttagaacag
ctccctccatctgtgctgcaagatgtcagtagccccctgagacccattgcacagcctaac
ctcatgatgccatcccatttgaaccacttcattgaagagaatcctccaggaatgtctgta
ggagaaccattagatcgtattcatggaaatttagctttggaaaccttaaggcaacagcaa
gcaagactacagcaatggaacgagcataacgcctatctcagtcagggcaatatttcttac
tctcaccatcaccaccctcatttatcccacctttctcagcagtcaatgggactgcatcag
cagccagtcagggcaaactggaaacttgccaacaatattgaagaggaaacggaggcaaca
tactcaagattccaggatttgcttcgagagctctcccaccgtgatcaaactgaaaacagg
gacctcgttgaaatgccgccacctcaatcaagacttttgcaatatagacaagtgcagccc
agaagtccaccagcactcctctctcctacatgcaactcaaaccacagtggccactttcct
aatttctctgagagtagagaccttgaaatctctaacaatccagcatttcagcagcatttg
cctcaaatgtacaatccccctttctcagtgccatctgaacacctgaccccaccttccttg
aaatacctgcagccagatggatcatggacctatgctaatttacaccagagtcacctcatg
gggcaaggctttcattatggtatacctccattgcctcatagatcacaaccgaaccctttt
atacaaatacaaaatcatcagcacgcagttggtcaggaaccatttcaccccctcgcttca
cgagcagtatctgcttcttctctgcatagcttagaagagtatgaaccaagaggacctggc
aggccattgtaccaaagaagaatgtcatctagttcaacccaggcttgttctgaaggttta
aatactcctccagataatgttggacagtgtcaagagcttcaggaccagagtaacccatcc
tctttcaattattcaccccctgaatggtgggtcaactcttcatcatcagccccatatcag
aacattccatgcaacggatccaacagagcaatcccaccaagagaacagttagttcctccg
aagactatcaaatcccctgaggaacagatgaaggttgaaaacatcccgttgtccagttct
tttaactacaatgtactccagcatctgggccagttcccacccctcatgcccaacaagcag
attgtggaatccaacagcaacagccagcccagcgctgggttgaacaaacctgccatgtcc
tacgcaagtgctctgagggctcctcccaagcccagaccccctcctgagcaggcaaaaaag
aatagcgaccccttgtccctgtttcaggaacttagcctaggtagttcatcaggtagcaat
ggcttctactcctattttaaataa
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integrated database retrieval system
