KEGG   Protobothrops mucrosquamatus (Taiwan habu): 107288503
Entry
107288503         CDS       T05763                                 
Symbol
COL2A1
Name
(RefSeq) collagen alpha-1(II) chain
  KO
K19719  collagen type II alpha
Organism
pmur  Protobothrops mucrosquamatus (Taiwan habu)
Pathway
pmur04510  Focal adhesion
pmur04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:pmur00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    107288503 (COL2A1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    107288503 (COL2A1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:pmur00536]
    107288503 (COL2A1)
Glycosaminoglycan binding proteins [BR:pmur00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   107288503 (COL2A1)
SSDB
Motif
Pfam: Collagen COLFI VWC
Other DBs
NCBI-GeneID: 107288503
NCBI-ProteinID: XP_015672611
LinkDB
Position
Unknown
AA seq 1492 aa
MFSFVDSRTLVLLAATQVILLAVVNCQNEDIQEEGSCVQDGQRYSDKDVWKPELCQICVC
DTGTVLCDDILCEEMRDCPRPEIPFGECCPICPTDQSTASGQPGPKGQKGEPGDIKNVVG
PRGPPGPQGPSGEQGPRGERGEQGEKGVPGPRGRDGEPGTPGNPGPSGPPGPPGAPGLGG
NFAAQMAGGFDEKAGGGGAQMGVMQGPMGPMGPRGPPGPSGSPGPQGFQGSPGEPGEPGS
GGAMGPRGPSGPPGKPGDDGEAGKPGKSGERGLPGPQGARGFPGTPGLPGVKGHRGYPGL
DGSKGEAGAPGAKGESGSSGENGSPGPMGPRGLSGERGRPGPSGAAGARGNDGLPGPAGP
PGPVGPSGGPGFPGAPGAKGEAGPTGARGPEGAQGSRGESGSPGSPGPAGPSGNPGNDGI
PGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQAGEPGIAGFKGEQGPKGEPGP
GGPQGTPGPAGEEGKRGARGEPGAAGSIGPPGERGSPGNRGFPGQDGLAGPKGAPGERGP
LGLGGPKGAPGDPGRPGEPGLPGARGLTGRPGDAGPQGKLGPSGAPGEDGRPGPPGPQGG
RGQPGVMGFPGPKGANGEAGKAGEKGLSGVPGLRGLPGKDGETGAGGPPGPAGPAGERGE
QGAPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAAGLVGPRGERGFPGERGPAGAQGL
AGGRGLPGTPGTDGPKGAAGPVGPSGAQGPPGLQGMPGERGAGGIPGAKGDRGDAGEKGP
EGAPGKDGGRGLTGPIGPTGPAGPSGEKGESGPPGPGGAAGTRGAPGERGETGPPGPAGF
AGPPGADGQPGAKGEQGESGQKGDAGSPGPQGPSGAPGPQGPTGVTGPKGGRGAQGPPGA
TGFPGAAGRVGPPGPNGNPGSPGPPGASGKDGPKGARGDAGPVGRTGDPGLQGPAGVAGE
KGESGEDGPPGADGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGSSGGPGD
RGPPGPVGPPGLTGPSGEPGREGNPGSDGPPGRDGSPGPKGERGETGAVGGHGAPGSPGA
PGPVGPTGKQGDRGETGPQGPIGPTGLAGARGLAGPQGPRGDKGESGEAGERGLKGHRGF
TGLQGLPGPPGPSGDQGTSGPGGPSGPRGLPGPVGPSGKDGSNGMPGPIGPPGPRGRSGE
TGAAGPPGNPGPPGPPGPPGAGIDMSAFAGLGQTEKGPDPMRYMRSDQAFTNLRQHDVEV
DSTLKSLNNQIESIRNPEGSKKNPARTCRDLKLCHPDWKSGDYWIDPNQGCTLDAIKVFC
NMETGESCVYPKPRSIPRKNWWTSKNKEKKHIWFGESINGGFHLSYGDDNLAPNTANIQM
TFLRLLSSEGSQNLTYHCKNSIAYMDAASGNLKKALLIQGSNDVEMRAEGNSRFTYTALQ
DGCTKHTGKWGKTIIEYRSQKTSRLPIIDIAPMDIGGADQEFGVDIGPVCFL
NT seq 4479 nt   +upstreamnt  +downstreamnt
atgttcagctttgtggattcaaggactctagtgctcctggcagctactcaagtaatttta
ttagcagttgtcaattgtcagaatgaggatatacaggaggaaggcagctgtgtacaggat
gggcagagatatagtgataaagatgtgtggaaacccgaactctgccagatctgtgtttgt
gacactggcactgtcctctgcgacgatattctctgcgaagaaatgagagactgtcccagg
cctgagatacccttcggagaatgttgccctatatgtccaactgatcagtccaccgccagt
gggcaacctggtcccaagggtcaaaagggagaacctggtgatatcaagaatgttgtagga
ccaagaggccctcctggaccacagggaccttcaggtgaacaaggaccaaggggagaacgt
ggagaacaaggagaaaaaggtgttccgggtccacgtggcagagatggtgaacctggtaca
cctggcaatccagggccctctgggcccccaggacctccaggagcccctggccttggtgga
aactttgctgctcagatggctggtggatttgatgagaaagcaggtggtggtggtgctcag
atgggagtgatgcaaggccctatgggaccaatgggaccgcgaggacctccaggaccatcg
ggatcacctggccctcaaggatttcaaggcagccctggggaacccggagaacctggttct
gggggtgcaatgggtccccgtgggccatctggaccgcccggaaaaccaggagatgatggt
gaagcaggcaaacctggcaaatcaggagagcgtggattacctggacctcagggtgctcga
ggtttccctgggaccccaggccttcctggtgtcaaaggccacagaggatatcctggttta
gatggctctaaaggagaagctggtgcgccaggtgctaagggtgaatctggatcttctggg
gagaatggttctcctggtcctatggggccccgtggcctgtcaggtgaaagaggacgtcct
ggcccatctggtgctgctggtgctcgtggtaatgatggtctccctggtccagctggtcca
ccgggacctgttggcccttctggtggcccagggtttccaggggctccaggtgcaaagggt
gaagctggtcccactggtgctcgtggccctgagggtgcccaaggctctcgaggtgaatct
ggatcccctggttctcctggacctgcaggaccttcaggcaatcctggaaatgatgggatc
cctggtgccaaaggatcagcaggtgctcctggcattgctggtgctcctggttttcctggc
ccacgtggaccacctgggccacaaggtgcaacaggacctttgggtcccaaaggtcaagcg
ggagagcctggaattgcaggcttcaaaggtgaacaaggccccaagggtgaacctggccct
gggggaccacaaggaacacctggcccagctggtgaagaagggaagagaggagctcgtggt
gagccaggagctgcaggatcaattggaccacccggagagaggggttcccctggaaatcgt
ggttttccaggtcaggatggattagctggtcccaaaggtgctcctggagaacgtggccct
cttggtcttgggggacccaaaggtgcccctggagatcctggacgacctggagaacccggc
ttgcctggtgcccggggactcactggtcgtcctggggatgctggtcctcaaggcaaactt
ggcccatctggtgctccgggtgaagatggacggcctggccctcctggtcctcaaggtggt
cgtggtcagcctggcgttatgggtttcccaggccccaaaggtgctaatggtgaagctggt
aaagctggtgagaaggggctatctggtgttcctggactacgaggtcttcctggcaaagat
ggcgagacaggagcaggtggaccaccaggacctgctgggcctgctggagagagaggtgaa
cagggtgctcctggaccatctggattccaaggacttccaggccccccaggccctccaggt
gaaggtggaaaaccaggtgaccaaggcgttcctggagaggctggtgctgctggtcttgtt
ggtcccagaggtgaacgtggcttcccaggagaacgtggacctgcaggtgcgcaaggcttg
gctggtggtcgagggcttcctggtactcctggtactgatggacccaagggtgcagctggt
cctgttgggccttctggggcccaaggccccccaggtctgcagggaatgcctggtgagaga
ggagctggaggtattcctggagcaaagggagacaggggtgatgccggtgaaaaaggccca
gaaggtgctcctggcaaagatggcggccgaggattgactggccctattggccctactggt
cctgctggccctagcggagagaagggtgaatctggtcctcctggtccaggtggagctgct
ggtactcgtggtgcccctggtgagcgtggagaaactggacctcctggccctgcaggattt
gctggcccccctggggctgatggccagcctggtgctaaaggtgagcaaggtgaatctggc
cagaaaggagacgctggatcccccggtccacaagggccatctggtgctcctggtccacag
ggtcctactggtgtaacaggtccaaaaggaggtcgtggtgcacaaggacccccaggtgcc
actggattccctggtgcagcaggacgagttggaccaccgggccccaatggtaaccctggt
tctccaggcccacctggtgcttctggaaaagatggtcccaagggtgcccgtggtgacgca
gggccagttggacgcactggtgatccaggtttgcaaggccctgctggtgttgcgggagag
aagggagaatctggagaagacggtcctcctggtgcagatggcccacctgggcctcagggt
ttggcgggacagagaggtatagttggtcttcctggtcagcgaggtgaaagaggctttcct
ggtctgcctgggccttctggtgagcctggtaaacaaggatctagtggaggtccaggagat
agaggcccacctggaccagttggtccacccggtttgactggtccttctggtgaacctggc
cgtgagggtaatcctggttcagatggtcctccaggcagagatggttccccgggaccaaag
ggtgaacgtggtgagactggtgctgttggaggtcacggtgctcctggctcacccggggct
ccaggtcctgttggtccaactggcaaacaaggagacagaggagaaacaggtcctcaaggt
cccattggccctactggccttgcaggagcaaggggcttagctggtccacaaggccctcgt
ggcgacaaaggtgaatctggagaggcaggagaacgaggtctgaagggtcaccgaggattc
actggcctgcagggtctccctgggcctcctggtccttctggagatcaaggtacatctggt
cctggtggtccctctggtcccaggggtctcccaggtcctgttggtccctctggcaaagat
ggctctaatgggatgcctggccctattggccctcctggccctcgtggtcgtagtggagaa
actggtgcagctggtcctcctggcaaccccggacctcctggtcctcccggcccacctgga
gctgggattgatatgtcagcttttgctggccttggccagactgagaaaggccctgatcca
atgcgctacatgcgatccgatcaggctttcaccaatttgcggcagcatgatgttgaggtc
gactccaccctgaagagtctcaacaaccagattgaaagcatccgaaaccctgagggcagc
aagaagaacccagctcgaacctgtcgtgacctgaaactatgccaccctgactggaagagc
ggcgattattggattgaccccaaccaaggctgcactttggacgccataaaggttttctgc
aacatggagactggggagtcctgtgtctatccgaagccaaggagcattcccagaaagaat
tggtggacaagcaagaacaaggagaaaaagcacatctggtttggagaaagcatcaatgga
ggctttcatcttagctacggagatgacaacctggctcctaacacggccaacatccagatg
actttcctgcggctcttgtcttctgaaggctcccaaaaccttacctaccactgcaagaac
agtattgcctacatggatgcagcatctggcaaccttaagaaagctctcctgatacaggga
tccaacgatgtggagatgagagctgagggcaatagcaggttcacctacactgccttgcag
gatggatgtacgaaacataccggaaagtgggggaagaccatcattgagtatcgatctcag
aagacttcgcgcctgcccatcattgacattgcacctatggacattggtggtgccgatcag
gaatttggtgttgatattggccccgtgtgctttttgtaa

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