Protobothrops mucrosquamatus (Taiwan habu): 107288748
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Entry
107288748 CDS
T05763
Symbol
COPA
Name
(RefSeq) coatomer subunit alpha
KO
K05236
coatomer subunit alpha
Organism
pmur
Protobothrops mucrosquamatus (Taiwan habu)
Brite
KEGG Orthology (KO) [BR:
pmur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmur04131
]
107288748 (COPA)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmur04147
]
107288748 (COPA)
Membrane trafficking [BR:
pmur04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
107288748 (COPA)
Exosome [BR:
pmur04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
107288748 (COPA)
Exosomal proteins of bladder cancer cells
107288748 (COPA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
TPR_COPA_B
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR75_1st
WD40_RFWD3
WD40_MABP1-WDR62_1st
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
107288748
NCBI-ProteinID:
XP_015672878
LinkDB
All DBs
Position
Unknown
AA seq
1224 aa
AA seq
DB search
MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW
NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESE
VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW
EVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAH
PNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLYYVKDRFLRQLDFNSSKDVAVMQLRSG
SKFPVFNMSYNPAENAVLLCTRPSNLENSTYDLYAIPKDADSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSILIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDADSITLFDVQQK
RTLASVKISKVKYVIWSADMSHVALLAKHAIMICNRKLESLCNIHENIRVKSGAWEESGV
FIYTTSNHIKYAVTTGDHGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFK
LALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEI
ALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYVITGNLEKLRKMM
RIAEIRKDMSGHYQNALYLGDVAERVRILKNCGQKSLAYLTAATHGLEEEAENLKETFDP
EKEVIPEIDPDARLLQPPAPIMPLDTNWPLLTVSKGFFEGTIASKGKGGALAADIDIDTV
GTEGWGEDAELQLDEDGFVDAGEGFGEDGVAKAPEEGGGWDVEEDLDLPPELEVPAGPTG
EAEEGFFVPPTKGTSPAQVWCNNSQLPVDHILAGSLETATRLLHDQVGVVTFAPYKQLFL
QTFARGRTTYQALPSLPSMYGYPHRNWKDAGVKNAVPAVGLKLNDLIQRLQLCYQLTTAG
KFEEAVEKFRSVLLSVPLLVVDNKQEIAEAQQLIAICREYIVGLSMELERKKLPKDTLEE
QKRICEMAAYFTHASLQPVHMILVLRTALNLFFKLKNFKTAATFARRLLELGPKPEVAQQ
TRKILSACEKNPSDAHQLNYDMHNPFDICAASFRPIYRGKPVEKCPLSGACYSPEFRGQI
CRVTTVTEIGKDVIGLRISPLQFR
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgctcaccaagttcgagaccaaatcggcccgcgtgaaagggctgagctttcaccctaaa
cgaccttggatccttacgagtttgcacaatggggtgatccagctctgggactatcggatg
tgcaccctcattgacaaatttgatgaacacgatggacctgtcagagggatcgatttccac
aagcagcagccgctctttgtctccggaggggatgactataaaatcaaggtctggaattac
aaactgcgccgttgtctcttcacactgctgggccacctggattacatccgcaccactttc
ttccaccacgaatatccctggatcctcagtgcgtccgatgaccagaccatccgggtgtgg
aactggcagtccaggacctgcgtttgtgtgttgaccggacataaccattatgtgatgtgc
gcccagttccatccttccgaagacctggtcgtgtctgccagtttggaccagactgtgcgc
gtttgggatatttctggtctaagaaagaagaatttgtctcctggagctgtggagtccgag
gtccggggcatcaccggcgtggatctttttggcaccacggacgctgtggtgaagcatgtt
cttgagggacacgatcgtggggtaaactgggcagctttccaccccaccatgcccctcatc
gtctcaggggctgatgaccggcaagtcaagatttggaggatgaacgagtccaaggcctgg
gaggtggacacctgccgcggccattacaacaacgtctcctgtgctgtgttccacccccgg
caggagctcatcctcagcaattcggaggacaagagcatccgagtctgggatatgtccaaa
cgcacgggcgttcagaccttccgcagggatcacgaccgcttctgggtgttggcagcccat
ccaaacctcaacctcttcgcggcaggtcacgatggagggatgatcgtcttcaagctggag
cgcgagaggccggcttacgccgtgcacggcaacatgctctactacgtcaaggaccgcttc
ctccgccagctggacttcaacagctccaaagatgtggccgtcatgcagttgagaagcggc
tccaagtttcccgtcttcaacatgtcctacaaccctgcggagaacgctgtgctcctttgc
acgaggccaagcaacctggagaacagcacctacgacctctacgccattcccaaggatgcc
gattcccagaacccagatgctccggaagggaagcgctcctcggggctgacagccgtctgg
gtcgctcggaaccgctttgccgtcctggatcggatgcactcgatcctcatcaagaacctg
aagaacgaaatcaccaagaaggtccaagtgcccaactgcgacgagattttctacgccggc
actgggaacctgttgctgcgggatgccgattccatcaccctcttcgacgttcagcagaaa
cggactctggcttcagttaagatctccaaggtgaaatatgtcatctggtcagcagacatg
tcccatgtggctctcctggcgaagcacgcgatcatgatctgcaaccgaaaactggagtca
ctgtgcaacatccacgagaacatccgcgtcaagagtggtgcctgggaggagagcggtgtc
ttcatttacaccacaagcaaccacatcaaatacgccgtcaccaccggggaccacgggatc
atccgcacgcttgatttgcccatctacgtgacccgcgtgaagggcaacaacgtctactgc
ctcgaccgcgaatgccggcctcgcgtcctcaccatcgaccccacggagttcaaattcaag
ctggccctgatcaaccggaagtacgatgaggtcctgcatatggtgcgtaacgccaagcta
gtgggccagtccatcatcgcctacctgcagaagaagggctatcccgaagtggcgctgcat
ttcgtgaaggacgagaagacgcggttcagcctggccctggaatgcggcaacattgagatc
gctctggaggcagccaaagctctggacgacaagaactgctgggagaagctgggggaggtg
gctctgctgcaggggaaccaccagattgtggagatgtgctaccagcgcaccaagaacttc
gacaagctctccttcctctacgtgatcacgggcaacctggagaagctgcgcaagatgatg
aggatcgcggagatccggaaggacatgagcggccactaccagaacgccctctacctgggc
gatgtggccgaaagggtgaggatcctgaagaactgtgggcagaagtcgctggcctacctc
accgctgctacccacggcctggaggaggaggcggagaacctgaaggagacctttgacccc
gagaaggaagtgattccagagattgaccccgacgcccgcttgctgcagccaccggccccc
atcatgcccttggacaccaactggcctctgctgaccgtctccaagggcttctttgagggc
accatcgccagcaaaggcaaaggaggcgccttggcggccgacattgatatcgacaccgtt
ggcaccgaaggctggggagaagacgcggagctgcagctggacgaagacggctttgtcgat
gccggggaaggctttggagaggacggcgtggccaaggcccccgaggagggaggcggatgg
gatgttgaggaagacctggacctccctccggaactggaggtcccagcaggtcccacaggc
gaagcagaagagggattctttgtgccacccaccaaaggcaccagcccagcacaggtctgg
tgcaacaattcccaactgcccgtggatcacatcctggctggctctcttgagacggccacg
aggctcctccatgaccaggtgggagtggtcacattcgcaccctacaagcagctcttcctg
cagaccttcgcccggggccgaacgacataccaggctctgcccagcctgccttccatgtat
ggctatcctcatcgcaactggaaggacgccggggtgaaaaacgccgtcccggcggtgggc
ctgaagctgaacgacctgattcagcgcttgcagctctgctaccagctcaccacggccggc
aagtttgaggaggcggtggagaaattccgctccgtcttgctcagcgtgccgctgctggtg
gtggacaacaagcaggagattgctgaggcccagcagctgatcgccatctgccgggagtac
atcgtggggctgtccatggagctggagaggaagaaactgcccaaggatactctggaggaa
cagaagcgcatttgtgagatggccgcctacttcacccacgccagcctgcagcccgtccac
atgatcctggtcctgcgaacggccctcaacctcttcttcaagctcaagaacttcaagacg
gccgccaccttcgcccgccgtctcttggagctcggccccaagcccgaagtggcgcagcag
acccgcaaaatcctgtccgcctgcgagaagaaccccagcgacgctcaccagctcaactac
gacatgcacaacccgttcgacatctgcgctgcctccttccggcccatttaccggggcaaa
ccggtggagaagtgcccgctcagcggggcctgctattcgcccgagttccgcggccagatc
tgcagggtcacaactgtgacggagatcggcaaagatgtcatcggcttgaggatcagccct
ctgcagttccgctga
DBGET
integrated database retrieval system
