Protobothrops mucrosquamatus (Taiwan habu): 107288784
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Entry
107288784 CDS
T05763
Symbol
THOC5
Name
(RefSeq) THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
pmur
Protobothrops mucrosquamatus (Taiwan habu)
Pathway
pmur03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pmur00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107288784 (THOC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmur03019
]
107288784 (THOC5)
03041 Spliceosome [BR:
pmur03041
]
107288784 (THOC5)
Messenger RNA biogenesis [BR:
pmur03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
107288784 (THOC5)
Spliceosome [BR:
pmur03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
107288784 (THOC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
107288784
NCBI-ProteinID:
XP_015672920
LinkDB
All DBs
Position
Unknown
AA seq
683 aa
AA seq
DB search
MASESNKKRKPKVIRTDGGPQEGKRSRADVDQDAKYYSEEAEVDLRDPNRDYELYKQTCQ
DLQKLMAEIQELKSKGHKDSAAEIEERRVQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAK
LKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIELVSVDEFYKEAPPEISKSDVTL
HDPHEQTLSRLNWELEQRIRLAEKYKESLANKEKILKEIEVKKEYLSNLQPRLNSIMQAS
LPVQEYFAMPFDQVHKQYETARHLPPPLYVLFVQASAYGQACDKKLAVAIEGNVEEARAL
CKPPEDSQDDESDSDVEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLSVTINLKCKDGSLL
LLTFYYLMNLNVLTVKAKVTAATEMTLPISAGDLLCPDSLLSCLYPGDHGKRTPNPANQF
QFDKVGILTLNDYVAELGHPYVWVQKLGGLHFPKDQPQNPVIADNSLSASHMERTMKLLK
TRLESRLALHKQFASLEHGILPVSPESQHLFPAKIVSHLVKWVSLTYEDYLELPYTKDVA
GADLAEDTHLYYLALIERGTAKLQVAVVLNPGYSSIPPIFSLCLNWKGEKTNTNDDNIRA
MESEVNVCYKELSGPKPGYQLLTNQLQRLCVVLDVYLETETHDNSVEGPKEFPQEKMCLR
LARGPSRLKPFKYNHPQGFFSHR
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgagtccaacaagaagcggaagccgaaggtgattcgcacggatggcggtcca
caagaaggcaagcggagcagagcggacgttgatcaggatgccaagtactacagcgaagag
gctgaggtggatctgcgggaccccaaccgggattatgaactttacaaacagacctgccag
gatcttcagaagctgatggcagagatccaggaactgaagagtaaaggccacaaagacagt
gctgccgagatagaagagcgacgggtccagagttgcgtccacttcatgactctgaagaag
ctcaaccgtttggctcatattcggctgaagaagggaagggaccagacccacgaggcaaaa
ctgaaagtggatgcttatcacctccagctccaaaatttactctatgaagtgatgcatctg
cagaaggagatcacaaagtgtctggagttcaaatccaagcacgaagagattgaactggtg
agcgtggacgagttttataaagaagcccctccagaaatcagcaaatcggatgtgacgctc
cacgacccacacgagcagaccctctcccgcctcaactgggaactggagcagcgcatacgg
ctggcagagaagtataaagaaagtttagccaacaaagagaagattcttaaagagatagaa
gtgaagaaagaatatctgagcaatctccagcctcggcttaacagcatcatgcaggcctct
cttcctgtccaggaatacttcgccatgcctttcgaccaagttcacaagcaatacgaaaca
gccaggcatctcccacccccgctctacgtcctctttgtccaagcgagcgcctacggccag
gcctgtgataagaagctggctgtggctattgaaggaaacgtagaggaagcaagagctctt
tgcaaacctccggaagactcccaggatgacgagagtgattccgacgtggaggaggagcag
actacgaaacgtcgccgaccaactttgggggtgcagctggatgacaaacggaaagagatg
ctgaagaggcaccctctgtctgtcaccatcaacttgaagtgtaaagatggcagcttgctg
ctcctcaccttctactatttgatgaacctcaacgtcctgaccgtcaaggccaaggtgaca
gcagccaccgagatgaccctgcccatcagtgctggggacctgctgtgccctgattctctt
ctgagctgcctctatcctggggaccacggaaagagaaccccaaaccctgccaatcagttc
cagtttgacaaagtgggcatcctgaccctgaacgactacgtggctgaactgggccacccg
tacgtgtgggtgcagaaattggggggcttgcacttccccaaggaccagccccagaatcct
gtgatcgccgataactcactgagtgctagccacatggagaggaccatgaaattgctcaaa
acgaggttggagtcccgccttgcccttcacaagcaatttgcttcccttgaacatggcatt
ctgcccgtctcccctgagtctcagcacctctttcccgccaagattgtgtcccatttggtg
aagtgggtgtccctgacgtacgaggattacttggagctgccttacacgaaagacgtggct
ggggccgatttggctgaagatacccacctgtattacttggcactgatagaaagaggcact
gccaaactccaggtagccgtggtgctgaaccccggatactcctccatcccccccatcttc
agcctgtgcttgaactggaaaggggagaagaccaacactaacgatgacaacattcgggcc
atggagagtgaggtcaacgtctgttacaaggaactcagcggccccaagccgggctatcaa
ctcctcaccaaccagttgcaacgcctttgtgttgtcttggatgtgtacctggagaccgag
acgcacgacaacagcgtggaaggacccaaggaatttccccaggagaagatgtgcctgcgc
ctggccaggggtcccagccggttgaagcccttcaaatacaaccaccctcaaggcttcttc
agccatcgctga
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