Protobothrops mucrosquamatus (Taiwan habu): 107288877
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Entry
107288877 CDS
T05763
Symbol
CTCF
Name
(RefSeq) transcriptional repressor CTCF
KO
K23195
transcriptional repressor CTCF
Organism
pmur
Protobothrops mucrosquamatus (Taiwan habu)
Brite
KEGG Orthology (KO) [BR:
pmur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmur03000
]
107288877 (CTCF)
03036 Chromosome and associated proteins [BR:
pmur03036
]
107288877 (CTCF)
Transcription factors [BR:
pmur03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
107288877 (CTCF)
Chromosome and associated proteins [BR:
pmur03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
107288877 (CTCF)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_REST
Zf-C2H2_ZNF451_C
zf-C2H2_ZN142
zf-C2H2_7th_ZNF462
zf-met
zf-C2HE
zf-C2H2_6
LIM
zf-C2H2_15
zf-WIZ
Motif
Other DBs
NCBI-GeneID:
107288877
NCBI-ProteinID:
XP_015673025
LinkDB
All DBs
Position
Unknown
AA seq
729 aa
AA seq
DB search
MEGDMEADAVEAIGEETFIKGKERKTYQRRREGGQEEDACPMPPNQVDGTEVVQEVNAGV
QMVMMEQLDPTLLQMKTEVIEGAVPQDAEATVDDTQIITLQVVNMEEQPINLGELQLVQV
PVPVSVPVATTSVEELQGAYENEVSKGGLQEGEPMICHTLPLPEGFQVVKVGANGEVETL
EQGELQPQEDPNWQKDPDYQPPAKKTKKTKKSKLRYTEEGKDVDVSVYDFEEEQQEGLLS
DVNAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHL
CGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDY
ASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQ
SGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYIEQGKKCRYCDAVFHE
RYALIQHQKSHKNEKRFKCDQCDYACRQERHMIMHKRTHTGEKPYACSHCDKTFRQKQLL
DMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCLGPDGVEGENGGEPKKGKRGR
KRKMRSKKEDSSDSEENAEPELDDIEEEEETAVEIEAEPEVEPVAPTPPPAKKRRGRPPG
KANQPKQPQPTAIIQVKDQNTGAIENIIVEVKKKPETETVVATPGTQPAAVEAPNGDLTP
EMILSMMDR
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtgacatggaagcggacgcagttgaagctattggggaagaaacgttcatcaaa
ggcaaagaacggaagacctaccagagacgccgggaaggcgggcaggaagaagatgcttgc
ccgatgccgcccaaccaagtagatgggactgaggtggtgcaggaggttaacgctggcgtt
cagatggtcatgatggaacagctggatccaacgctgcttcaaatgaagaccgaggtcata
gaaggcgccgtgccacaagatgccgaagccaccgtggacgacacccaaatcatcaccctg
caggttgtgaacatggaagagcagcccatcaacctgggcgaactccagctcgtccaagtg
cccgtcccggtctctgtccctgttgccaccacttccgtggaagaacttcagggggcctat
gagaacgaggtctccaagggtggcctccaggagggggagcccatgatctgccacacgctc
cctctgccagaaggtttccaggtggtaaaggttggggccaatggcgaggtggagaccctg
gagcagggggagcttcagcctcaggaggatcccaactggcagaaagacccagactatcag
ccccccgccaaaaagacaaagaaaaccaaaaaaagcaaactccgttacaccgaggagggc
aaggacgtggatgtgtctgtgtacgattttgaagaggagcagcaggagggcctgctttcc
gacgtcaacgcggagaaagtggtgggcaacatgaagccccccaagccaacgaaaattaaa
aagaaaggggtgaagaaaacattccagtgtgaactgtgcagctacacctgcccccggcgt
tcaaacctggaccgtcacatgaaaagccacacggacgagaggccacacaagtgccacctt
tgcggcagagccttccgaacagtcacactgctgagaaatcacctcaatactcacacaggt
actcgtcctcacaagtgccccgactgcgacatggcctttgtgacaagcggagagttggtt
cgacatcgccgctataaacatacccacgagaagccattcaagtgttccatgtgtgactac
gccagtgtggaggttagcaaattgaaacgccacattcgttctcacaccggggaacgccca
ttccagtgcagcttgtgcagctacgccagtagagacacttacaaactgaagaggcacatg
aggacccattctggtgagaagccctacgagtgttacatttgccacgctcgcttcacccag
agtgggaccatgaagatgcacatcctgcagaagcacacggaaaacgtggccaagttccac
tgcccccactgtgacacggtgattgcacgaaagagcgatttaggtgtccatttgcggaag
cagcattcctacattgagcagggcaagaagtgtcgttactgtgacgccgtgttccacgag
cgatacgcactcatccagcaccagaagtctcacaaaaacgagaagcgcttcaaatgtgac
caatgcgactatgcgtgccgacaggaacggcacatgatcatgcacaagcgaacccacact
ggagaaaagccttacgcctgtagccattgcgacaaaaccttccgccagaagcagttgctt
gacatgcacttcaagcgctaccacgatcccaactttgtcccagctgccttcgtctgctct
aagtgtggcaaaacgttcacacgccgtaacacaatggccagacatgcagataattgttta
ggccccgatggggttgaaggagagaacggaggggagcccaagaaggggaaacgtgggcga
aagagaaagatgcgctccaagaaagaggattcttcggacagtgaggaaaatgctgaacca
gaattggatgacattgaggaggaggaagaaacagcggttgaaattgaggccgaaccagaa
gtggagcccgtggccccaactcctccgccagccaagaagcggagaggacgccctccaggc
aaagccaatcaacccaaacagccccagcccacagcaatcattcaggtgaaagaccagaac
actggtgcaattgaaaacattattgtggaagtgaagaagaagcccgaaacagagactgtc
gtggccactccaggaactcagccagccgcagtggaagcgcccaatggagacctcacccca
gagatgatccttagcatgatggaccggtga
DBGET
integrated database retrieval system
