Protobothrops mucrosquamatus (Taiwan habu): 107289290
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Entry
107289290 CDS
T05763
Symbol
USH2A
Name
(RefSeq) usherin
KO
K19636
usherin
Organism
pmur
Protobothrops mucrosquamatus (Taiwan habu)
Brite
KEGG Orthology (KO) [BR:
pmur00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pmur03037
]
107289290 (USH2A)
Cilium and associated proteins [BR:
pmur03037
]
Primary cilia and associated proteins
USH complex and associated proteins
107289290 (USH2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
107289290
NCBI-ProteinID:
XP_015673505
LinkDB
All DBs
Position
Unknown
AA seq
2769 aa
AA seq
DB search
FITSYGLYMNGILVQNSSKLNYYISGLSPWSLHAFRVQACTVNGCALGPLVKAHTTEDVP
KGNIELFVINDRAKEVKVKWFPLNEPNGQIMYAVLFTGIFYADKANSNYSILNCTQILHI
GKEANVWVSIGGLIPFSNYTVEVNASNSQGYVISDPVEIVLPAGAPDGMLPPRLSSATPT
SLQVLWSTPVRNNAPGLPRYRLQIRLKNYSENNTELFSKPTIYLHHILKDLQPYTSYELR
VIACNEYGDTFSNWTLIDTEEDKPGPIDPPLILEVKSRETTISWQPPSRPNGIVTHYNIY
QNNQLHDTIPGARSKHIASFLEPYTVYKFQVEGCTSKGCSLSSESLPIQTLPDAPEDIPA
PELYSDTPTSVLVSWQPPLHPNGLVENFTIERRVKGTEQVSTVASFPSNCSKSYLDQSAG
LSPWKKYEYRILASTFQGGINSSSWVEVITRPSRPENIQAPKVQALDPYTAQVSWESPSI
LNGEILSYEIYIYDLLRRKIQQPLASNPPEDLNLWDNIYSGTQWFYEDKGLSRNTTYAYK
LIVHNEVGYTSSEKVIVTTLAGFSEKGTNLAAKPLNHTAIEVKWTTPTLQDVQESIEYYF
LSWNDTVHINSKKIPATENSAVICELYPNTQYQILLQVFSGLHSITSEPVQVTTPDVERE
GLFPPEIIVINSTAVHVIWALPSNSNGVVREYSIYVNNNRYETTIKVPGSFILGDLSPFT
LYDIQVESCRRNACVRSNGTQIRTAEGVPKDLSPPLISVLGSRSLQINWTSPGQPNGIIL
GYELLRKAQHHCTEAKQLSKHQREGICLLLECNIHENICGRQCCNPQFKICRNGNQYNTS
NFQCCEDKHLSFLLNASSACCGGQRCRAEPEYQCCGNYSTRIFIGMFCCRHEYLNMSSIV
CCSAFNGEAKAHIKKNSSVPLKCRVTELIPESEECCNGLGYNPLKYVCTDRISSGMMMKI
KEESKCIPLCSISTEAVTYCGRCNFDEHTCLCAWIKSSRSYTKNKENKSICPFLGEKIYT
GGPTQYSFKDKNLEPHVTYEYRLAAWNKHGKDFSEMNSATTKQDVPECVSPPHWTKVDNR
EDIIFLTWKEPCQPNGIIIYYIILRNGVEHFRGKELSFMDTSDIQPYQEYSYLLRACTVA
GCSDSSMVIAVIVQGIPENVLPPTIIPLSATALHLSWVAPKKPNGLIREYRIHQIGKGLI
CTGPADQMKHTVTDLQPYENYNFTLTACTFAGCTTSQTTAGRTLQAAPQGVWSQPRHITV
SSKILELYWDEPEKTNGIVIQYRLFCNGEEIFKGGRENLNFTHSAMQPNKRYVYQLEAST
WVGSNISEKYVVQTPITTPEEIHIPYNITVINAYSIFVAWDIPGSFKSNVPLEYNILLDA
GSTSPLVKPVGQPKFLLLEGLDPCTQYEIRIQACQNDGCGVGERVYATTAEAFPEDLSPP
IISAIGPTYIAVKWSPPKKPNGIITNYFIYRRPMETQEEMLVFTWSEGTLEFIDATDVLQ
PFTEYEYCVKAQNSKGSVNSSWSSTQTLEARPSGMKSPSAQAISAHSVFLNWTSPASPNG
AIFQYHVVYQERQNDPTINTQDALTVPGEMYQTYLFGLKPYTTYDIHIVAVNNAGQVASP
WTSVRTLEASPSGLRNFTVDKKENGRALLLRWAEPSKPNGNIKIYNIFNDGNLEYSGLSR
QFLFRRLDPFTEYTLVLEACTAAGCTRSSPQQIWTDAAPPASQMAPVIHLVNATSIELSW
SEPINSNGKIMRYEVIHRHTKENASGENRTTEEENIVFTEYNTGSNAFVYHAQHLQPWTT
YEYKIRAWNSAGYTDSPWSAAKTSQAAPEGMAAPMFTYIPQNPSKIWISWSLPEKSNGVL
LSYKLQRNDVPYPFSFDASTFNYTDQGLLPYTEYNYLITACTLGGCCSSDRSRIRTLEAA
PAIVSPPTLEGIHSTQINISWAPPQIQNGEIIKYILKLNDEEQYVGKSLFKTVLNLQPYT
KYDITLVACTNGGCTVSASQSAWTIEAPPLNLDPPMLLVTDSESLEITWKAPNNPNGKIQ
IYELRRNGLLVYSGLDRHYKDFMLTPGVEYIYTVTATNSQGSVTSQIAKIRTDPSAPSGM
SPPLLHPWSLQTILVTWDPPAKINGNIINYTIILREPIKSQKKVIYLDSFHDSFGRQSYN
LTELKPYHRYEVQVQACSLLGCTHSEWASIQTLEAPPEIQPAPFIDVQSSPDGFQTVLSI
VWTGPKHPNGDILHYELYRRQPLPNQHNVSLVYNGSSTSFKDDTLLPFTEYEYQVWSVNS
AGRTASSWIKCKTGPAPPQGLPAPLFETVASTSAVVNSRPPLKPNGIITLYRFFSNGTKG
KEKVLSEGTTAQQTIHGLKPFTTYSIGVEACTCFNCCSQGPMAQVTTQPAAPTQQPSPHI
QNLTSRNASFLWDAPQEPNGIVRRYELHMYTSCLPWLLPIERVCKPGPIEVRYSGKNRHS
SVSDLQPYTTYKLKVVSYNSVGSTTSEWITFTTEKEVPQYKSPFIIIGNLSTIFLDWSHT
FLLNGLLKEYVLMEGGQHIYSGFDTRLYLPRTSDKIYLFQVTCITDEGSVETPVIKYNAA
IGFGPVLTTPGENNKGNTKQAMFYTELWFVILMAILALILLAIFLSLILQRKINKQLYSR
ERPPLVSVQKRMSPMNVYSQGETHMGLADTKIPGPASPSSIHSSRSISVLQGPSQSQIED
RFSQDSLHRSVSQLIEASEKKSSVEDIVWDAIIHGHDSSLRADDEDLVSTIKSFSTVTKA
HTTFTDTHL
NT seq
8312 nt
NT seq
+upstream
nt +downstream
nt
gatttattactagttatggattatacatgaatggcattctggtgcagaattcctcaaaac
tgaactattatatttctggcctttctccttggagtctccatgccttcagagttcaagcat
gcacagtaaacggctgtgctttggggccgctggtaaaagctcatacaactgaagatgtac
ctaaaggaaacattgaattgtttgttattaatgatagagccaaagaagttaaagtgaaat
ggtttcctctgaatgaacccaatgggcaaataatgtatgctgttcttttcactggaatct
tctatgctgacaaagctaatagcaattacagtattttaaattgcacacaaattttacata
ttggcaaagaagcaaatgtctgggtgtccattggaggactaattccattttcaaactaca
cagtggaagtgaatgcttctaatagccaaggttatgtgatcagtgatcctgtagaaattg
tcctgcctgctggtgctccagatggcatgttgcctcctaggctttcatctgctactccaa
ccagtcttcaggttctctggtctacaccagttcgtaacaatgctccaggcttacccagat
atcgactccaaataagacttaagaactactcagaaaataatacagagttattttctaaac
caacaatttatttacatcacatactcaaggatctgcagccgtatacatcttatgagttga
gggttattgcctgcaatgaatatggtgatacattcagcaactggactctgatagatacag
aagaagataaaccaggacctattgacccaccactaatcctggaagtgaaatccagagaaa
caaccatttcctggcagcctccttcaaggccaaatggcattgtcacccactacaacatct
atcaaaacaaccaactgcacgatactattccaggagctagatcaaaacatattgcatctt
tcttggaaccatatacagtttacaaatttcaagtagaagggtgcacttccaaagggtgct
ctctttcctctgagagcctgcctatacaaacccttccagatgcacctgaagacatccctg
ctccagaattatactcagacacaccaacatctgttcttgtgtcatggcaacctcctcttc
atccaaatgggctggttgaaaacttcacaatagagaggagagtgaaaggaacagagcaag
tttccacagtagcctcttttccttccaattgttccaagagttatctagatcaaagtgctg
gtctcagcccttggaaaaaatatgaatacagaatattggcaagcacttttcaaggtggca
ttaatagcagttcttgggtagaagtcatcaccaggccctcaagacctgaaaacatccagg
ctcctaaggtgcaagcattagatccgtatactgcccaggtttcctgggaatctccttcca
ttttaaatggagaaatattgagctatgagatttacatatatgacctcctgagacgtaaaa
tccagcagccacttgcatcaaatccccctgaagatttaaatctctgggacaatatttact
caggaactcagtggttttatgaagataagggtcttagcaggaatacaacatatgcctata
agttgatagtacataatgaagtaggctatacatcaagtgaaaaagtgattgttacaacat
tagcaggattttcagaaaaaggcactaatcttgctgcaaagcctcttaaccatacagcta
tagaagtgaaatggaccactccaaccttacaagatgtacaagaaagtattgaatattatt
tcctttcctggaatgacactgtccacataaactccaaaaagatccccgcaactgaaaata
gtgctgttatttgtgaactatatccaaatacacagtatcagattttgcttcaagttttca
gtggacttcacagcatcacaagtgaacctgtgcaagtgactacaccagatgtagaacgag
agggcctgttccctccagagatcatcgtcatcaatagtacagctgtacatgtcatttggg
cattgccttcaaactcaaatggtgttgtcagggaatattctatttatgtgaataataacc
gatatgagaccacaataaaggtgcctggatctttcattttgggagatttgtctccattca
ctctttatgacatacaggttgaatcctgtagacggaatgcttgtgtgagaagtaatggaa
cccaaattagaactgcagaaggtgtgcctaaagacttatcaccaccattgatctctgtcc
ttggttcaagatcacttcagattaactggacatcaccaggacaaccaaatggcattattt
taggatatgaactattgcgtaaagctcagcatcactgcactgaggcaaagcaactgtcaa
aacatcaacgtgaaggaatttgcctactcctggaatgcaacattcatgaaaacatatgtg
gaagacaatgctgtaatccccagtttaagatatgtcgcaatgggaatcagtacaatactt
caaatttccaatgctgtgaggacaagcatctttcatttcttctgaatgcatcaagtgctt
gttgtggaggtcagaggtgcagagcggaaccagagtatcaatgttgtggtaactattcta
cacggatattcataggaatgttctgttgcagacatgaatatttgaatatgtcaagtatcg
tatgctgctcagctttcaatggtgaagctaaagcccacattaaaaagaatagctcagtgc
cattaaaatgccgtgtgactgaacttattccagagagcgaagaatgttgtaatggacttg
gatataatcccttgaaatatgtttgcactgacaggatttcatctggaatgatgatgaaga
taaaagaagaatcgaaatgcatcccactgtgttctatatctactgaagcagtgacatact
gtggacggtgtaactttgacgagcatacttgtttatgtgcttggataaagagttcccgta
gttatacaaaaaataaagaaaataaaagcatatgcccatttttgggggagaagatttata
caggaggcccaactcaatattcattcaaagataagaatctagaacctcatgttacgtatg
aatataggctagctgcgtggaacaaacatgggaaagattttagtgaaatgaatagtgcaa
ccactaaacaagatgtccctgaatgtgtaagtccacctcattggacaaaagtggataatc
gtgaagacataatatttctaacatggaaggaaccttgtcaaccaaatggtatcatcattt
actatattattctccgaaatggagttgaacatttcagaggaaaggaactgagcttcatgg
acaccagtgatattcaaccataccaggaatactcatatctattacgtgcttgcactgtgg
ctggatgttcagacagtagcatggtaattgcagtcattgtccaagggattccagagaatg
ttctgccaccaacaattatacctctaagtgcaacagccttgcatttgagttgggtggcac
caaagaagccaaatggtttaatcagagaataccgcatccatcaaattggaaagggactta
tatgtactggccctgcagaccagatgaagcacacagtcacagatcttcagccttatgaaa
actacaatttcacactcacagcatgtacatttgctggatgcactaccagtcagacaactg
caggaagaacattgcaagctgctcctcaaggggtgtggtcacagcctcgtcatattacag
taagctctaaaatattggaattgtattgggatgagccagaaaaaaccaatggaattgtca
ttcaatacagattattttgtaatggagaagagattttcaaaggtggtagagaaaatctga
atttcactcattctgccatgcaaccaaataaaagatatgtttaccagttagaagccagta
catgggttggtagcaatatcagtgaaaaatatgttgtccagacaccaataacaacaccgg
aagagattcacataccatataatatcacagtaattaatgcatattccatattcgtagcat
gggacattcctgggtcatttaagagcaatgtacctttggaatacaatatattactagatg
ctggcagtacctcccctcttgtaaaaccagttggacagcccaaattccttcttttggagg
gacttgatccatgcacccaatatgagataaggatacaagcctgccagaatgatggctgcg
gagttggtgaacgagtatatgcaaccactgctgaagcctttcctgaagatttgagtcctc
ctatcatttcagccattggaccaacatatatagctgtgaaatggtcacctcctaaaaaac
ccaatgggataattacaaactactttatttacagacgtcccatggagactcaagaggaaa
tgcttgtgtttacctggtctgaaggcactttagaatttattgatgctacagatgttcttc
agccattcacagagtatgaatactgtgtcaaggctcagaattccaaaggttctgtgaata
gttcatggtcttcaacacagaccctagaagctcgaccatcaggcatgaaatctccctcag
cacaagccatcagcgctcattctgtgttcctaaattggaccagccctgcttctcctaatg
gtgctatttttcagtatcatgttgtctatcaagagagacagaatgacccaacaattaaca
cgcaggacgcactaacagttcctggagagatgtatcaaacttacttgtttggtttgaagc
cgtatacaacctacgacattcacattgttgctgtcaataatgctgggcaagttgctagtc
catggacttcagtgcgcaccctggaagcttccccaagtggcctaaggaactttacagtgg
acaagaaagagaatggcagggcattattactcagatgggcagagccttccaagcccaatg
gtaacattaagatttacaatattttcaatgatggtaatctagaatatagtggtttgtctc
gtcagttcctcttcagacgtcttgatcccttcactgaatacactctcgttcttgaagctt
gtacagcagctggttgcactcgctcttcaccgcagcaaatttggacagatgcagcccctc
ctgcttctcaaatggctcctgtaatccatttggtgaatgcaaccagcattgaactgagct
ggtctgagccaattaattcaaatggaaaaataatgcgctatgaagttattcacagacaca
ccaaagaaaatgcttcaggggaaaatagaacgacagaagaagagaacattgttttcacag
aatataacactgggagtaacgcatttgtatatcatgctcagcatttgcagccgtggacta
catacgaatataaaatacgtgcctggaattcagcaggctacactgatagtccttggtctg
ctgcaaaaaccagccaagctgccccagaaggcatggctgctcctatgttcacttatatcc
ctcaaaatcccagcaaaatatggatttcatggtcactcccagaaaaaagcaatggtgttc
tactgtcatataagctccaaagaaatgatgttccctatccttttagctttgatgcttcaa
ccttcaattatactgatcaaggcctgcttccatatacagaatacaattatttaataactg
cttgtaccctgggagggtgctgctctagtgaccgttccagaatacggacattagaggcag
ctccagcaatagtcagccctcctactctagaaggtatacattcaacccagattaatatat
cttgggcaccaccccaaattcaaaatggtgaaatcataaagtacattttaaagctgaatg
atgaagaacaatatgttggaaagagtttattcaagacagtattgaatctacaaccttata
ctaaatatgacatcacattggttgcctgtaccaacggaggctgcactgttagtgcatccc
aatctgcttggacaatagaagctcctcctcttaacttagatcctcccatgttactagtga
cagattcagaatctctagaaattacatggaaagctcccaataatccaaatggtaaaatcc
agatttatgagctaaggaggaatggattgctggtttattcaggtctagatagacactata
aggactttatgttaactcctggagtggaatacatctatactgttactgcaaccaacagcc
aagggagtgtcaccagtcagatagccaagataagaaccgatccttctgccccatctggaa
tgtctccacctctgttgcatccatggtccttgcagacaattttggttacttgggatcctc
cagcaaagattaatggtaacataatcaattatactatcattcttcgggagcctattaaat
cacaaaagaaagtgatttatctggattcattccatgattcttttggaagacagtcttaca
atttaacagaactaaaaccctatcacaggtatgaagtacaagtacaagcttgcagtcttc
tgggctgtactcacagtgaatgggcatccatacaaactcttgaagcaccccctgaaatac
agccagctcctttcatagatgtccagtcaagtcctgatggattccagactgttctttcca
ttgtgtggactggcccaaagcacccaaatggagacatcttacattatgaactttatcgaa
gacagccattacccaatcaacacaatgtcagccttgtttataatggttcatccacttcat
tcaaagacgacacgctcctgcctttcactgaatatgaatatcaggtttggtcagttaatt
ctgctggccgaactgccagcagttggataaaatgtaagactggcccagcccctcctcaag
ggcttcctgcccctttgtttgagacagtagcttctacttctgctgtggtcaatagccgtc
ctcctctaaagccaaatggaataatcaccctctacaggttcttctccaatggcaccaaag
gaaaggagaaggtgctctcagaaggcactactgctcagcagacaatccatggacttaaac
cttttaccacttattctattggggttgaagcttgcacatgcttcaactgctgcagccagg
ggccaatggctcaagtcaccacccagccagctgcacccacccagcagccttctccccata
tacagaacctgacgtcaagaaatgcttcttttctctgggatgctcctcaggaacccaatg
gcattgtgagaagatatgaactccacatgtacacatcctgtcttccttggttactgccca
tagaaagagtttgtaagcctggacctattgaagtgagatatagtgggaaaaaccggcatt
ctagtgtgagtgaccttcagccttacacaacctacaaactgaaagtggtgtcctacaatt
cagttggaagcactacttcagaatggattacttttactactgaaaaagaggttcctcagt
acaaatctccatttatcataatcggaaatttatccaccatcttcctggattggagtcata
ccttcctattgaatgggcttttgaaggaatatgtgctaatggaaggagggcaacacatct
acagtggctttgataccagactgtatttgccaaggacatctgacaaaatttatttatttc
aggtgacttgcatcactgatgaagggagtgttgaaacgcctgtaatcaaatacaatgctg
ctattggatttggtcctgtcttgacaactccaggagaaaataacaaaggcaacacaaagc
aagcaatgttctacacagagttgtggtttgtgatactaatggcgatccttgccttgatcc
ttctagcaattttcctgtctctaattctacagaggaaaataaacaagcagctgtattcac
gggaaaggcctcctttagtctcagttcaaaagagaatgtcaccgatgaatgtctattcac
aaggagaaactcacatgggactggcagatacaaaaattccaggaccagcatccccttcaa
gtatacacagcagcagaagcatttctgtccttcaggggccaagccaaagccagatagagg
ataggttttcccaagattccctgcatcgaagtgtcagtcagctcattgaagcatctgaga
aaaagtcctcggtggaagatattgtttgggatgccattattcatggccatgacagtagtt
tgcgtgcggatgatgaagatcttgtgagcactatcaaaagcttcagtactgttaccaaag
cacatacaacatttactgatacacacttgtaa
DBGET
integrated database retrieval system
