Protobothrops mucrosquamatus (Taiwan habu): 107289313
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Entry
107289313 CDS
T05763
Symbol
FDFT1
Name
(RefSeq) squalene synthase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
pmur
Protobothrops mucrosquamatus (Taiwan habu)
Pathway
pmur00100
Steroid biosynthesis
pmur01100
Metabolic pathways
Module
pmur_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
pmur00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
107289313 (FDFT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pmur01006
]
107289313 (FDFT1)
Enzymes [BR:
pmur01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
107289313 (FDFT1)
Prenyltransferases [BR:
pmur01006
]
Terpene biosynthesis
Squalene/phytoene synthase
107289313 (FDFT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
Octopine_DH
Motif
Other DBs
NCBI-GeneID:
107289313
NCBI-ProteinID:
XP_015673530
LinkDB
All DBs
Position
Unknown
AA seq
418 aa
AA seq
DB search
MELLKKWLGHPEEIYNLVKFKMGGYKIVMPKMDQDSLSDSLRICYMYLNQTSRSFAAVIQ
ALDGELRHAVCILYLVLRALDTVEDDMTISLEAKVPMLHNFHSYLYQPDWKFMGSKEKDR
QVLEDFPTISLEFRNLAKVYQDVIADICHKMGVGMAEFLEEKVNSNEQWDKYCHYVAGLV
GIGLSRLFSASELEDPVVGQDVELANSMGLFLQKTNIIRDYLEDQLEGREFWPKEVWSKY
VKKLSDLANPENIDKAVQCMNELITNALHHVPDVLTYLSRLKNQSVFNFCAIPQVMAIAT
LAACYNNQQIFKGVVKIRKGQAVTLMMDATNIQAVKTIMYQYMEEIYQKVPSTDPSSAKT
QQIVNTVQSMSLPSGTLVSQTHYSPLYFSCIMILAALSWQYLNTVSKATEEYVHTGEN
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggagctgctaaagaaatggctcggtcacccagaggagatctacaatctggtgaagttt
aaaatgggtggatacaagatagtgatgcccaagatggaccaagactcgctcagcgacagc
ctccggatatgttacatgtacttgaaccaaaccagccggagcttcgccgcggtcatccaa
gctctggacggggagttgcgccatgcagtgtgcatcttgtatttggttctccgagctctg
gatactgtggaagatgacatgactatcagtcttgaagctaaggtccccatgttacataat
tttcactcctatttatatcagccagactggaaatttatgggcagcaaagagaaggacaga
caggtgctggaagactttccaacgatttccctggagtttcggaatttggcaaaagtctat
caagatgtgattgctgacatttgtcacaagatgggcgttggtatggcagagtttttggaa
gagaaggtgaattctaacgaacagtgggacaagtattgccactacgttgctggcctggtg
ggaattggcctctcccgtctcttctctgcctcagaattagaagatcctgttgtcggtcaa
gacgtagaactggccaactccatgggactctttctgcagaaaaccaacatcattagggat
tatctggaggaccaacttgaaggcagagaattctggcccaaagaggtttggagcaagtat
gtgaagaagctgtcagatctggctaacccagagaacattgacaaagccgtccagtgtatg
aatgagctcattaccaacgccctacatcatgttcctgatgtcttgacatatttgtcccgc
ttgaagaatcaaagtgtgttcaatttctgtgctattccacaggtgatggctatagccacc
ttggcagcctgctacaacaaccaacagatcttcaaaggtgtggtgaagattcgaaaggga
caagcagtcacattgatgatggatgctactaacatacaggctgtcaaaaccatcatgtac
caatatatggaagagatctaccagaaggtcccaagtacagacccttcctctgccaaaact
caacagattgtcaacactgtccagtccatgagcttacccagtggtactctggtctcccag
acccattattcacccctctatttttcctgcattatgattttggctgcattgagctggcag
tatctgaacactgtctcaaaagcaacagaggaatatgtgcacactggtgagaactga
DBGET
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