Protobothrops mucrosquamatus (Taiwan habu): 107289568
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Entry
107289568 CDS
T05763
Symbol
PRPF8
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
pmur
Protobothrops mucrosquamatus (Taiwan habu)
Pathway
pmur03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmur00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107289568 (PRPF8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmur03041
]
107289568 (PRPF8)
Spliceosome [BR:
pmur03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
107289568 (PRPF8)
Complex C
U5 SnRNP specific factors
107289568 (PRPF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
107289568
NCBI-ProteinID:
XP_015673834
LinkDB
All DBs
Position
Unknown
AA seq
2335 aa
AA seq
DB search
MAGVFPFRGPCPPLPTPLTPLPDYMSEEKLQEKARKWQQLQAKRYAEKRKFGFVDAQKED
MPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVPVLY
HITGAISFVNEIPWVIEPVYIAQWGSMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYAD
NILDVEPLEAIQLELDTEEDAPVLDWFYDHQPLKDSRKYVNGSTYQRWQFTLPMMSTLYR
LANQLLTDLVDDNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFNDIN
KIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLINPIS
HRHSVKSQEPLPDDDEEFELPEFVEPFLKETPLYTDNTANGIALLWAPRPFNLRSGRTRR
ALDIPLVKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKATK
FFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRF
GNAFHLCREVLRLTKLVVDSHVQYRLGNVDAFQLSDGLQYIFAHVGQLTGMYRYKYKLMR
QIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAAGWRVWLFFMRGITPLLERWLGNLLARQF
EGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSEAWRCW
KANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLT
RLYLKAEQERQHNYLKDGPYITAEEAVAVYTTTVHWLESRRFSPIPFPPLSYKHDTKLLI
LALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMD
LYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQGIN
NLQDVWETSEGECNVMLESRFEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYK
DMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDLATE
VAHPIRLFCRYIDRIHIFFRFSADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARM
RLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRILPKC
RTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFTKIV
NKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPK
ELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWESEFI
DSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRT
DFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEG
LFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGI
FMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPRKSY
KMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIERYA
RAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGSKPLIQQAMAKIMKANPAL
YVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTT
KPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQ
IIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLY
DDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWIKVE
VQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQSQLT
ATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDIKET
GYTYILPKNVLKKFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLP
GQLPQHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKVMAENPSWDGEKTIIITCSFTP
GSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQASWN
YNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGEVYSADREDLYS
NT seq
7008 nt
NT seq
+upstream
nt +downstream
nt
atggccggagtgttccctttccgggggccttgcccccccctgcccacgcccttgacgccg
ttgcctgactacatgtcggaggagaaattgcaggagaaagcccgcaaatggcaacagctg
caggcaaagcgctatgccgagaagaggaagtttggctttgtggacgcccagaaggaggac
atgccgcctgagcacgtgaggaagatcatccgtgaccatggagacatgaccaacaggaag
ttccgtcacgacaagcgggtgtatctgggggccctgaagtacatgcctcacgcagttctg
aagctcctggagaacatgccgatgccctgggagcagatccgtgacgtgcccgtcctctac
catatcactggtgccatttccttcgtgaacgagatcccttgggtgatcgagccagtgtac
atcgcccagtgggggtccatgtggatcatgatgcgacgggagaagagggaccggcggcat
ttcaagcggatgcgcttcccgccctttgacgacgaagagccccccctcgactacgcagac
aacatcctggacgtggagcccctggaggccatccagctggagctggacacggaggaagac
gctcccgtcttggactggttctatgaccaccagcccctgaaggacagccgcaagtacgtc
aacggctccacctaccagcgatggcagttcaccctccccatgatgtccaccctctaccgc
ctggccaaccagctcctcacggacctcgtggacgacaactacttttacctctttgacctg
aaggcctttttcacctccaaggccctcaacatggccatcccgggggggcccaagtttgag
cccctggttcgagacatcaacctgcaggacgaggactggaacgagttcaatgacatcaac
aagatcatcatccggcagccgatccggacggagtacaagatcgccttcccctacctctac
aacaaccttccccatcacgtccacctcacctggtatcacacgcccaacgtggtcttcatc
aaaaccgaggacccagacctgccggctttctactttgaccctctcatcaaccccatttcc
cacagacactcggttaagagccaggagccacttcctgatgacgacgaagagtttgagctg
ccggagtttgtggagcccttcctgaaggagacccctctttacacggacaacacggccaac
ggcatcgccctgctctgggcaccgcggccctttaacttgcgctccggccggacccggcga
gccctcgacataccgctggtcaagaactggtaccgggagcactgtcctgccgggcagcct
gtgaaggtgcgggtgtcttaccagaagctcctgaagtactacgtcctgaatgccctcaag
cacaggccccccaaggcgcagaagaagaggtacctcttccgctccttcaaggccaccaag
ttcttccagtccaccaagctggactgggtggaggtggggctgcaggtctgccgccagggc
tacaacatgctcaaccttctgatccaccgcaagaacctcaactacctccacctggactac
aacttcaacctgaagcctgtcaagaccctcaccaccaaggaaaggaagaagtctcgcttt
ggcaacgccttccacctgtgccgtgaggtgctgcgtctgaccaagctggtggtggacagc
cacgtccagtacaggctaggaaacgtggacgccttccagctgtcagacggcctccagtac
atcttcgctcacgtcgggcagctgacggggatgtaccggtacaagtacaaactcatgagg
cagatccggatgtgcaaggacctcaagcacctcatttattaccgcttcaacacagggccg
gtggggaagggccccggctgcggtttctgggctgcaggctggcgcgtgtggctgttcttc
atgcgagggattacgcctctgctggagcgctggctcgggaacctcctggccaggcagttt
gaaggccgccactcaaagggggtggccaagactgtcaccaaacagcgggtagagtcccac
tttgacctggagctgcgggcggcagtgatgcacgatatcctggacatgatgcccgagggg
atcaagcagaacaaggcccggaccatcctgcagcacctgagcgaagcctggcggtgctgg
aaggccaatatcccttggaaggtcccggggctgccaactcccatcgagaacatgatcttg
cggtacgtgaaggccaaagcagactggtggaccaacacagcgcactacaaccgggagcgc
atccgccgtggggccaccgtggacaagacggtctgcaagaagaacttgggccgcctgact
cgcctctacctgaaggccgagcaggagaggcagcacaactacctgaaggatggtccgtac
atcaccgcagaggaggctgtggccgtttacaccaccacggtgcactggctggagagccgg
cgcttctccccgatccctttcccccccctctcctacaaacacgacaccaagctcctgatc
ctggccctggagaggctgaaggaggcttacagcgtgaagtctcgtctgaaccagtcccag
cgggaggagctgggcctgatcgagcaggcatacgacaaccctcacgaggccctttcacgc
atcaagcgacacttgctcacccagcgagccttcaaggaggtgggcatcgagtttatggac
ctctacagccacctggtccctgtttatgacgtggagcccctggagaagattacagacgcc
tacctggaccaatacctgtggtacgaggcagacaagagacgtctcttccctccatggatc
aagccagctgacacagagccccctccgctgctagtgtacaagtggtgccaggggattaac
aacctgcaggacgtgtgggagaccagcgaaggggagtgcaacgtgatgctcgagtcccgc
tttgagaagatgtatgagaagatcgacttgacgctgctcaacaggctgctgcgtctcatt
gtcgaccacaacatcgccgactacatgacagccaagaacaacgtggtcatcaactacaag
gacatgaaccacaccaactcctacgggatcatccggggcctgcagttcgcctccttcatc
gtccagtattacgggctggtgatggacctgctggtgcttggcctgcaccgggccagtgag
atggccggccccccacagatgcccaacgacttcctcagcttccaggacctggccacagag
gtggcccacccgatacgcttgttctgcagatacatcgaccgcatccacatcttcttcagg
ttcagcgcagacgaggccagggacctgatccagcgctacctgaccgagcacccggatcca
aacaacgagaacattgtgggctacaacaacaagaagtgctggcctcgtgatgctcgcatg
cgcctcatgaagcatgacgttaacctgggccgcgctgtcttctgggacatcaagaaccgg
ctgccgcgctccgtcaccaccgtgcagtgggagaacagctttgtgtccgtgtacagcaag
gacaacccgaacctgctcttcaacatgtgcggctttgaatgtcgcatcctgcccaagtgc
cggacgagctacgaagagttcacccacaaggacggcgtgtggaacttgcagaacgaggtg
accaaggaacgcaccgcacagtgtttcttgcgagtggacgatgagtccatgcagaggttc
cacaaccgggtcaggcagatcctgatggcctcggggtccaccaccttcaccaagatcgtg
aacaagtggaacacggccctgatcggcttaatgacctacttccgggaggccgtggtgaac
acccaggagctgctggacttgctggtgaagtgtgagaacaagatccagactcggatcaag
atcggcctgaactccaagatgcctagccgcttcccgcccgtggtcttctacacccccaag
gagcttggggggctgggcatgctgtccatgggccacgtcctgatccctcagtccgacctc
aggtggtccaagcagacagacgtgggcatcactcacttccggtctgggatgagccacgag
gaggaccagctgatccccaatctgtaccggtacatccagccgtgggagagcgagttcatc
gactcccagcgggtgtgggccgaatacgccctcaagcggcaggaggccattgctcagaac
aggcgcctgaccctggaggacctggaggactcgtgggacagaggcatcccacgcatcaac
accctcttccaaaaggaccggcacacgctggcctacgacaagggctggagagtcaggacg
gatttcaagcagtaccaggtgctgaagcagaaccccttctggtggacccaccagcgccac
gacgggaagctttggaacctgaacaactaccgcacggacatgatccaggccctgggagga
gtggagggcatcctggagcacacgctcttcaagggcacctacttccccacctgggagggg
ctcttctgggaaaaagccagcggctttgaggagtccatgaagtggaagaagctgaccaac
gcccagcgctcgggtctcaaccaaatccctaaccggaggttcaccctctggtggtctccc
accatcaacagagccaacgtgtacgtgggcttccaggtgcagctggacctgactggcatc
ttcatgcacggcaagatccccacgctgaagatctccctgatccagatcttccgggctcac
ctgtggcagaagatccatgagagcatcgtcatggacctctgccaggtgtttgaccaggag
ctggacgccttggagattgagaccgtgcagaaggagaccatccaccccaggaagtcctac
aagatgaactcctcctgcgcggacatcctcctctttgcctcctacaagtggaacgtctcc
cggccctccctgttggccgactccaaggacgtgatggacagcaccaccacccagaagtac
tggatcgacatccagctgcgttggggagactatgactcgcacgacatcgagcgttacgcc
cgggcaaagttcctggactacacaacagacaacatgagcatctacccctcacccaccggg
gtcctcattgccattgacctagcctacaacctgcacagcgcctacggaaactggttcccc
ggaagcaagcccctgatccagcaggccatggccaagatcatgaaggccaacccagccctg
tacgtgctgagggagcggatccgcaaggggctgcagctctactcctcggagcccaccgag
ccctacctgtcctcccagaactacggggagctcttctccaaccagatcatctggtttgtg
gacgacaccaacgtctacagggtcaccatccacaagacctttgaaggaaacttgaccacc
aagccgatcaacggggccatcttcatcttcaaccctcggaccgggcagctcttcctgaag
atcatccacacttctgtttgggctgggcagaagcgcttgggccagctggccaagtggaag
accgcagaggaggtggcggccctgatccggtccctgcctgtggaggagcagcccaagcag
atcatcgtcacccggaagggcatgttggaccctttggaggtgcacctgctggacttcccc
aacatcgtgatcaaaggctcagagctgcagctgcccttccaggcctgcctgaaggtggag
aagtttggggacctcatcctgaaggcgacagaaccccagatggtcctcttcaacctttac
gatgactggctgaagaccatctcttcctacacggccttttcccgcctgatcctcatcctg
cgggcgctgcatgtgaacaacgatcgggccaaagtcatcttgaagccggacaagaccacc
atcacggagcctcaccacatctggcccaccttgactgatgaggagtggatcaaagtggag
gtgcagctgaaggacctgatcttggccgactacggcaagaagaacaacgtgaacgtggct
tccttgacccagtcagagatccgggacatcattctgggcatggagatctcggccccctcc
cagcagcggcagcagatcgcggagattgagaagcagaccaaggagcagagccagctgacg
gccacccagacgcggacggtcaacaagcacggcgacgagatcatcacctccaccaccagc
aactacgagacccagaccttctcctccaagaccgagtggcgggtcagggccatctccgcg
gccaatctccacctgcgcaccaaccacatctacgtttcctcggacgacatcaaggagacc
ggctacacctacattctgcccaagaacgtcctgaagaagttcatctgcatctccgacctc
cgagctcagattgcagggtacctctatggggtgagtcccccagacaacccccaggtgaag
gagatccggtgtattgtgatggtgcctcagtggggaacccaccagacggtccacttgccc
ggccagctgccccagcatgagtacctcaaggaaatggagcccctggggtggattcacacc
cagcccaacgagtctccccagctctccccacaggacgtcaccacccacgccaaagtcatg
gccgagaacccctcctgggacggggagaagaccatcatcatcacctgcagcttcactccg
ggctcctgcaccctgacggcctacaagctgacccccagtggctacgagtggggccggcag
aacacggacaagggcaacaaccccaagggctacctgccctcccactacgagcgggtgcag
atgctgctctcggaccgcttcctgggcttcttcatggtgccggcccaggcctcctggaac
tacaacttcatgggcgtccggcacgaccccaacatgaagtacgagctgcagctggccaac
cccaaggagttttaccacgaggtccatcgcccctcccacttcctcaactttgccctcctg
caggagggggaggtctactcagcggaccgggaggacctctactcctag
DBGET
integrated database retrieval system
