Protobothrops mucrosquamatus (Taiwan habu): 107289717
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Entry
107289717 CDS
T05763
Symbol
COP1
Name
(RefSeq) E3 ubiquitin-protein ligase COP1
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
pmur
Protobothrops mucrosquamatus (Taiwan habu)
Pathway
pmur04115
p53 signaling pathway
pmur04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pmur00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107289717 (COP1)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
107289717 (COP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmur04121
]
107289717 (COP1)
Enzymes [BR:
pmur01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107289717 (COP1)
Ubiquitin system [BR:
pmur04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107289717 (COP1)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
107289717 (COP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
zf-C3HC4_2
Beta-prop_EIPR1
WDR55
Beta-prop_RIG_2nd
EIF3I
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
zf-C3HC4
zf-RING_2
Beta-prop_CAF1B_HIR1
zf-RING_UBOX
Beta-prop_EML
Beta-prop_DCAF4
zf-C3HC4_3
zf-RING_5
Beta-prop_WDR90_POC16_2nd
zf-C3HC4_4
WD40_RFWD3
RING_XB3-XBAT31
Beta-prop_WDR35_TULP_N
Beta-prop_Vps41
WD40_like
Beta-prop_IFT140_1st
Beta-prop_DCAF12
Beta-prop_IFT122_1st
zf-rbx1
WDR90_beta-prop_4th
zf-RING_10
zf_C2H2_10
zf-RING_11
Sina_RING
Motif
Other DBs
NCBI-GeneID:
107289717
NCBI-ProteinID:
XP_029140434
LinkDB
All DBs
Position
Unknown
AA seq
713 aa
AA seq
DB search
MSGSRPSPQHPPAGPGAAAPPGSSSTSSVTTSACLGTAMAMGTAMATGTSAVPSRPVLVA
AAVSGSSCGGGLSRLAGTRVGSGSSTASSGSGTRKRPLLTPLCNGLLNSYEDKSNDFVCP
ICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNELILKQK
QRFEEKRFKLDHSVSSTNGHRWQIFQDLLGTEQDNLDLANVNLMLELLVQKKKQLEAESH
AAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEMSGLYSPVSEDSTVPQFEA
PSPSHSSIIDSTEYSQPGFSGSSQTKKQPWYNSTLASRRKRLTAHFEDLEQCYFSTRMTR
LSDDSRTSNQLDEFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAI
AGVTKKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILW
DGFTGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKVKLWSTNLDNSVASIEAKANV
CCVKFSPSSRYHLAFGCADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFVSGEEIVSAST
DSQLKLWNVAKPHCLRSFKGHINEKNFVGLASNGDYIACGSENNSLYLYYKGLSKTLLTF
KFDTVKSVLDKDRKEDDTNEFVSAVCWRALPDGESNVLIAANSQGTIKVLELV
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgtccggaagcaggccatcgccgcagcaccctccggccgggccgggtgctgcggcccct
ccgggctcctcctcgacctcctcggtcaccacctcggcctgcttgggcaccgcgatggcg
atgggcaccgcgatggcgacgggcacatcagccgtcccctcgcgacccgtgttggtggcg
gccgctgtgtctggatcctcctgcggcgggggcctttctcgcctggcggggacccgagtc
gggagcggcagtagcacagccagcagcggcagtggcaccaggaagaggccgctactgact
ccgctttgcaacggtcttctgaattcctacgaggacaaaagcaacgatttcgtatgcccc
atctgctttgatatgattgaagaagcttacatgacaaaatgtggacacagtttctgttac
aagtgcattcatcaaagcctggaagataacaacagatgtcccaaatgtaattatgttgtg
gataacattgatcatctatatcccaactttttagtgaatgagctcatccttaaacagaag
caaagatttgaggaaaagagattcaaattggaccattcagtgagtagcaccaatgggcac
aggtggcaaatatttcaagatttgttgggaacagaacaagataaccttgatctggccaat
gttaacttaatgttggaacttctggtgcagaagaaaaaacaactggaggcagagtcccat
gctgcccagctacagattttgatggaattcctgaaggttgccaggagaaataagagagag
cagttagagcaaatccagaaggagttgagtgttttggaagaagatattaaacgagtagag
gaaatgagtggcttgtattcaccagtcagtgaagacagcactgtgccccagtttgaagct
ccatctccttcacatagtagcattattgattctacagaatatagccaacctggatttagt
ggcagttcccagactaagaaacagccatggtataatagtaccttagcttcaaggaggaaa
agacttacagctcattttgaagatttggaacaatgctacttttctaccaggatgactcgt
ctatcagatgatagtagaacctcaaaccagctggatgaatttcaagagtgcctgtcgaag
tttactcgctacaattctgttcgacctttagcaacactgtcttatgcaagtgatctctac
aacggatctagcatagtctcaagtattgaatttgatcgagactgtgactattttgctatt
gcgggagtcacaaagaagattaaagtctatgaatatggcacagtcattcaggatgcagtt
gatattcattatccagaaaatgaaatgacatgtaattccaaaatcagctgtatcagctgg
agtagttaccacaagaaccttttggccagcagtgactatgaaggaacagtgatcttatgg
gatggattcacagggcaacgttcaaaagtctatcaggagcatgagaaaagatgctggagt
gtggactttaatttgatggatcctaaactcttggcttcaggttctgatgatgcaaaagtg
aaactgtggtcaacaaacctggacaattcagtagcaagtattgaggccaaggcaaatgtg
tgttgtgtaaaattcagtccctcatccaggtaccatcttgcttttggctgtgcagatcac
tgtgtccactactacgatcttcggaacactaaacagcccattatggtcttcaaagggcat
cgcaaagctgtttcatatgcaaagtttgttagtggagaagaaatagtctctgcgtcaaca
gatagccagctaaagctatggaatgtagcgaagccacattgtttgcgttcttttaagggt
cacatcaatgagaagaattttgtaggcttggcatctaatggagactatattgcctgtgga
agtgaaaataattcgctttacctatactataaaggtctctcaaagacactgctaaccttc
aaatttgacactgtcaaaagtgtcctggacaaagatcggaaggaggatgacacaaacgaa
tttgtcagtgctgtatgctggagggcattaccagatggggagtccaatgtgttgattgct
gctaacagtcagggtacaattaaggtactggaactagtgtga
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integrated database retrieval system
