KEGG   Protobothrops mucrosquamatus (Taiwan habu): 107289836
Entry
107289836         CDS       T05763                                 
Symbol
DDB2
Name
(RefSeq) DNA damage-binding protein 2
  KO
K10140  DNA damage-binding protein 2
Organism
pmur  Protobothrops mucrosquamatus (Taiwan habu)
Pathway
pmur03420  Nucleotide excision repair
pmur04115  p53 signaling pathway
pmur04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:pmur00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    107289836 (DDB2)
  09124 Replication and repair
   03420 Nucleotide excision repair
    107289836 (DDB2)
 09140 Cellular Processes
  09143 Cell growth and death
   04115 p53 signaling pathway
    107289836 (DDB2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pmur04121]
    107289836 (DDB2)
   03400 DNA repair and recombination proteins [BR:pmur03400]
    107289836 (DDB2)
Ubiquitin system [BR:pmur04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     107289836 (DDB2)
DNA repair and recombination proteins [BR:pmur03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      107289836 (DDB2)
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40_Prp19 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_WDHD1_1st WD40 Beta-prop_WDR5 Beta-prop_EML_2 WDR55 Beta-prop_WDR36-Utp21_1st Beta-prop_Aladin Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_RIG_2nd EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR19_1st Beta-prop_IFT140_1st Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WD40_RFWD3 WD40_MABP1-WDR62_2nd Beta-prop_WDR3_2nd Beta-prop_TEP1_C Beta-prop_HPS5 Beta-prop_Vps41 Beta-prop_WDR35_TULP_N NBCH_WD40 Beta-prop_NUP159_NUP214 DUF3965
Other DBs
NCBI-GeneID: 107289836
NCBI-ProteinID: XP_015674137
LinkDB
Position
Unknown
AA seq 507 aa
MGSRKQSKDEHLNPREHQSEKVSKSSGKRKRDYGELDNELQAKKLFVKKTKLQKIGQACF
GSMVRNSRVAFHPWEMQKNIVHYIYQNMVGGTIGPQLKKCLQVPFVRSLYLYRLFRTASP
FDRRITALEWHPMHPSTVAVGSKGGDIILWNYEVLNKTCFIKGIGAGGAITGMKFNPFNP
SELYTSSVAGTTALQDFNGNTIRVMANTDDWDFWYCSVDVSATRRTVVTGDNVGNVILFS
TEGEQIWNLKLHKKKVTHVEFNSHCDWLLATASVDQTVKIWDLRNLKDKSSCLHVLQHDK
AVNAAYFSPTDGAKLLSTDQHNEIRVYSSSDWSKPQHSISHPHRQFQHLTPIKATWHPRY
DLIVVGRYPDPKFPGYTADELRTVDIFDGDSGEMVCQLHDPNASGIFSLNKFNPMGDTLA
SGMGFNILIWDREVMISKKQEDLMQAMKEQKIGLKNVLHQRGQRQRQSNTETNKFKTKLL
SAEFEDTKTKGKEYTLHTKRRKNPEDS
NT seq 1524 nt   +upstreamnt  +downstreamnt
atgggttctaggaagcagtcaaaggatgagcatctgaatccacgtgagcatcaatcagaa
aaagtgtcaaaatcatctggaaaaaggaaacgagactatggagaactagataatgagcta
caagcaaaaaaactatttgtgaagaaaaccaaactacaaaaaattggacaagcttgtttt
ggctccatggttcgaaattcaagagttgccttccatccatgggaaatgcaaaagaatatt
gtccactatatttatcaaaatatggtgggtggcactattggaccacagcttaagaagtgt
ctccaggtgccctttgtacgttctctctacttgtaccgtctgttccgaacagcaagtccg
tttgacagaagaattacggctctggaatggcatccaatgcaccccagcacggtggctgtg
ggctccaaaggaggagacatcatcttgtggaattacgaagtgctcaataaaacatgtttt
attaaagggattggagctggaggggctatcacaggaatgaagtttaatccttttaatcca
agtgagctgtacacatcgtcagttgctggaactactgccttgcaagattttaatggcaat
acaatacgggtcatggccaataccgatgactgggatttctggtattgcagtgttgatgta
tctgcaactcgtcggactgtagtaacaggagataatgtagggaatgtgattttgtttagt
actgaaggtgaacagatatggaatttgaagctgcacaaaaagaaagtaactcacgtggag
tttaattctcactgtgattggctgctggctacggcctctgtagatcagacagtcaaaatc
tgggatctgagaaatcttaaggataaatcaagttgtcttcatgtacttcagcatgataaa
gctgtcaatgcagcttatttcagcccaacagatggtgctaagctactgagtacagatcag
cacaatgaaatccgggtttattcttcttcggattggtccaaaccacagcattcaatttca
catccccataggcagttccagcatctcacacctatcaaggcaacgtggcatcctcgttat
gatctcattgtggttggtcgttatccagaccctaagttcccagggtacacagcagatgag
ctgagaactgttgacatatttgatggagacagtggagagatggtgtgccaactgcacgat
ccaaatgcatcgggcattttctcgctcaataagtttaaccccatgggcgacaccttggct
tcaggaatgggctttaatattctgatatgggaccgagaagtgatgataagtaagaagcag
gaggatctcatgcaagctatgaaagagcagaaaattgggcttaagaatgtactccaccaa
agaggacagaggcaaagacaatcaaacacggaaacaaacaaattcaaaactaaactgctc
agtgctgaatttgaggacactaaaacaaagggcaaagaatacacactgcacactaagaga
agaaagaatccggaggactcatga

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