Protobothrops mucrosquamatus (Taiwan habu): 107289900
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Entry
107289900 CDS
T05763
Symbol
ARID1A
Name
(RefSeq) AT-rich interactive domain-containing protein 1A isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
pmur
Protobothrops mucrosquamatus (Taiwan habu)
Pathway
pmur03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pmur00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107289900 (ARID1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmur03000
]
107289900 (ARID1A)
03021 Transcription machinery [BR:
pmur03021
]
107289900 (ARID1A)
03036 Chromosome and associated proteins [BR:
pmur03036
]
107289900 (ARID1A)
Transcription factors [BR:
pmur03000
]
Eukaryotic type
Helix-turn-helix
ARID
107289900 (ARID1A)
Transcription machinery [BR:
pmur03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
107289900 (ARID1A)
Chromosome and associated proteins [BR:
pmur03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
107289900 (ARID1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
107289900
NCBI-ProteinID:
XP_015674209
LinkDB
All DBs
Position
Unknown
AA seq
2277 aa
AA seq
DB search
MAAQVAPAAAAASSLGAPAPSELKKAEAQQRDCSSEEAGGEAAERGGEKQSESEGPPGKE
LQDGAESNGGGAGAEPDLKSPNGNPGPRPVATLNNNLPEPPGSGSGGGGGSNSSDGVGTP
PQQQQQQQPPPPTHPAALPPPAYGFGQPYGRGAQAAAAVVAAAAFHQHGGQQSPGMAALQ
SGGLEQPYSGPVGPPQGPPPPQNSHGVGSAEHGFPNHQYNNYYPAAGRSAGAYPPTPQAY
ALSSPRGNAQSPAQAGAKPPASVFQQQRFGAMGPSAGGPGGGSVGGPTQQPTSTPTLNQL
LTSPSSTRGYQGYPGADYGSGPQDGGATTKAPAAPDIASQYSGGTGQGWAAAGPGSQQRS
HHAPMSPGSSSAAGGQSLARSQQPSSPMDQMGKMRPQPYGGNNLYTQQQGPQSGQQQGHG
YPGQPYGPQTPQRYPVGTLSRTQTAMGSVSYAQQIPPYGQQGPTGYGQQTQTPYYNQQSP
HPQQQPSYAQQPPTQAPHAQPSYQQTQTQSQPPQLQSSQPPYSQPQPQPQPPHQQSPSPY
PQQSAPGQQQQHPQGQPPYSQQQSQSPYQQQQQQAQQSATSALAQPSATYPPSQSQQPSA
YSQQRFPPPQELSQDSFGSHASSATSMASSKGQEDVTLNLQSRPSSLPDLSGSIDDLPMG
TEGALSPGVSTSGISSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASVAQSRSG
PLSPAAVPGNQMPPRPPSGQSDSLLHSSMNQSTIAPDRGYIQRNPQIPQYNSPQPGSALS
PRQSSGGQMHTGMGPYQQNSMGAYGPQGSQYGPQGGYPRQPNYTAMPNANYPSPGMGGTM
NPMGAGNQIHGQTGIPPYPGLPPGRGLSHAAMGNRPYGPNMTAMPPQVGTGMCPPPGGRK
AQEAAAAAMHAAAVNSIQNRPSGYPHINQGGMMGTGPPYGQGINSMAGMLNPQGPPYQMG
GNMANNSAGMAASPEMMGLGDVKLTPAAKMNNKADGTPKSESKSKKSSSSTTTNEKITKL
YELGGEPERKMWVDRYLAFAEEKAMGMNNLPAVGRKPLDLYRLYISVKEIGGLTQVNKNK
KWRELATNLNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDIFATDSKKSQTKIQP
PSPAGSGSMQGPQTPQSTSSSMAEGGDLKPPTPASTPHSQMAPLQGIRSNSVGLQDAFPD
GSDPTFQKRNSMTPNPGYQPSMNTSDMMGRMSYEPNKDPYGSMRKGDGSDPFMSSGQVPN
SGMGDPYNRATGPGMSNMAMGPRQHYPYSHFERVRTEAGMGPEASLGTGTPQPNILPSTP
DSGMYSPSRYSQQPQQRHDSFSNHFPTQGTSSGSPFPSQQSTLYQPQQQNYKRTMDGNYG
PPAKRHEGEIYNVPYSTGQGQAQQQLPPAQTQQTSQPQTAQPSPQQEMYNQYGGNTYSAA
DRRPAAGPQNQFPFQFGRERVSAPPGSSTQQSMPPQMIGGPIQSTPEGPQQGTIWQGRND
MGYSYPNRQSTGSAPQGSAYHGVNRTEEMLHPDQRVNHEGPWPSHGNRQPPYGPSAPVPP
MTRPPQPNYQAQPSMQNHIPQVSSPAPLPRPVENRTSPSKSSFLHSGMKMQKAGPPVPAS
HVTPAAVQPPMIRRDITFPPGSVEATQPVLKQRRRLTMKDIGTPEAWRVMMSLKSGLLAE
STWALDTINILLYDDNSIMTFNLSQLPGLLELLVEYFRRCLIEIFGILKEYEVGDPGQRT
LLDPERCCQSSNSPEGVEKEEPQNSNCEVEEEEEEGEEEAAFANKVTAPLESNEEKLVSK
FDKLPVKIVQKNDPFVVDYSDKLGRVQEFESGLLHWRIGGGDTTEHIQTHFESKLELSLT
HKRASCNSVLRKRSVAEGNPVTREGESSAPDGPPEKRITATMDDMLSVRPGSLAEEEVVK
NVEVTKESSKFPFGISPAQSHRNIKILEDEPHSKDETPLCTLLDWQDSLSKRCICVSNII
RSLSFVPGNDFEMSKHPGLLLILGKLILLHHKHPERKQAPLTYEKEEEQDQGVSCNKVEW
WWDCLEMLRENTLVTLANISGQLDLSPYPESICLPILDGLLHWAVCPSAEAQDPFPTLGP
NAVLSPQRLVLETLSKLSIQDNNVDLILATPPFSRLEKLYSTMVRFLSDRKNPVCREMAV
VLLANLAQGDSLAARAIAVQKGSIGNLLGFLEDSLAATQFQQSQASLMHMQNPPFEPTSV
DMMRRAARALLALAKVDENHSEFTLYESRLLDISVSPLMNSLVSQVICDVLFLIGQS
NT seq
6834 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcaggtggcccccgccgccgccgccgccagcagcttgggtgccccagctccg
tccgagctgaagaaagcggaggcgcagcagcgggattgttcatcggaggaggcggggggc
gaggcggcggagcgcggcggcgagaagcagtcggaaagtgaaggtcccccgggaaaggaa
ctgcaggacggggccgagagcaatggcgggggcgccggggccgagcccgacctgaagagc
cccaacgggaacccgggccctaggcccgtcgccaccctgaacaataacctcccggagccg
cccggtagtggtagcggcggcggcggcggtagcaacagcagcgacggggtggggacgccg
ccgcagcagcagcagcagcagcaaccgccgcccccgactcatccggccgccttacccccg
ccagcctacgggttcgggcaaccctacggtcgaggcgcccaggcggctgcggccgtcgtc
gcggccgctgctttccaccaacatggcggacaacaaagccctggcatggcagcgctgcag
agcgggggcctggagcagccgtactcggggcccgtggggcccccccaggggccgccccct
ccccagaactcgcatggcgtcggcagcgcggagcacggcttccccaaccaccagtacaac
aactactaccccgccgccgggcgcagcgccggcgcctacccgcctacccctcaggcctac
gccctgagctccccccggggaaacgctcaaagccccgctcaagccggggcgaaaccgccg
gcgtcggttttccagcaacagcggttcggggccatggggccctcggccggcggcccagga
ggcggcagcgttgggggccctacccagcaacccacgtcgacccccaccctcaaccagctg
ctcacttcccctagctcgaccaggggctatcaagggtaccccggggccgattacgggagc
ggcccccaggacggcggagcgacgaccaaggccccggccgcaccggacattgcttctcag
tacagtgggggcaccggccagggctgggcggcagccggcccgggaagccaacaaaggagc
caccacgcgcccatgagccccgggagcagcagcgccgccgggggacagtcgctcgccagg
agccaacagccatccagtccaatggatcagatggggaagatgagacctcagccttatgga
ggaaacaacttatacacacaacagcagggacctcagtcagggcaacaacaaggccatgga
tatccaggacagccatatgggccacagactccccagagatatccagtggggactctaagc
aggacgcaaactgcaatgggcagtgtctcttatgcacagcagataccgccttatggacag
cagggccctactggttacgggcagcagactcagaccccttattacaaccagcagagtcct
cacccccagcaacagccttcttacgcccagcagccccccactcaggccccacatgctcag
ccttcttatcagcaaacgcaaactcagtctcagcctccccagcttcagtcatcccagccc
ccctattcacagccacagccacagccacaaccaccccaccagcagtccccatctccatat
ccccagcagtcagccccaggccagcagcagcagcacccccagggtcagcctccctactct
cagcagcagtcccagtctccttaccagcagcagcagcagcaagctcagcagtctgctacc
tcggcactcgcccagccatcggccacgtaccctccgtctcagtcacagcagccgtcagcc
tattctcagcagcgcttcccacctccacaggagttgtcacaggactcatttggttcccat
gcatcgtctgccacatcaatggcttccagtaaagggcaagaagatgtgactttgaatctg
cagtcgagaccctctagcttaccggatctctctggttcaatagatgatttgcctatgggt
accgaaggagcactgagtcctggcgtaagcacatcagggatttccagcagtcaaggagag
cagagtaacccagctcagtctcctttctctccacatacctctccgcacttgccaggcatt
cgaggaccttccccatcacccgttgggtcaccggctagtgttgctcagtcccgctctggt
ccactttctcctgctgcagtgccaggcaaccaaatgccacctcgaccaccaagtggccaa
tcagatagcctcttgcattcctccatgaatcagtcaaccatagccccagatagaggttat
atacagaggaatccacagataccccagtataattctcctcaacctgggtctgccttatct
ccacgtcagtcttctggaggacagatgcatactgggatgggaccgtaccaacaaaattct
atgggtgcttatgggcctcagggcagtcagtacggaccccaaggtggttatcccaggcag
ccaaactacactgcgatgcccaatgcaaattaccccagcccaggaatgggaggaaccatg
aacccaatgggagcagggaatcagatccatggtcagactggtataccaccctaccctgga
cttccaccagggagaggactgagccacgctgccatgggcaataggccttatggacccaac
atgaccgccatgcctccccaagtaggaactgggatgtgtcctccaccaggtggtaggaaa
gcacaagaagctgctgctgctgctatgcatgctgctgctgtcaactcaatccagaacagg
ccatctggttaccctcacattaaccaaggaggaatgatgggaactggtcctccctatggc
caaggaattaatagcatggctggcatgctgaatccccagggtccgccctatcaaatgggt
gggaatatggccaacaattctgcagggatggctgcaagtcctgaaatgatgggacttgga
gatgttaaattaacgcctgcagcaaaaatgaacaataaagcagatggaacaccaaaatct
gaatccaagtcaaagaaatccagttcctccaccactacaaatgaaaagattactaaatta
tatgagctgggtggtgagccagagagaaagatgtgggtagatcgttatttagccttcgct
gaagagaaagcaatgggaatgaacaatcttccagcagttggaaggaaacctttagatctg
tatcgactctacatttctgtgaaggagattggagggctgactcaggttaacaagaacaag
aaatggcgggagttggctaccaatttgaatgtgggcacctctagcagtgcagctagttct
ctgaagaagcagtatatccagtgtctctatgcttttgagtgcaagattgaacgaggtgaa
gaccctcccccagacatctttgcaacggattccaagaagtcacagaccaaaatacagcct
ccatctccagcgggttcaggctccatgcaaggtcctcagacacctcagtccactagtagc
tccatggccgaaggaggagacttgaagcccccaactcctgcatctacaccgcatagtcaa
atggcacctttgcaaggcatcaggagtaactcagtaggccttcaggatgcctttcccgac
ggtagtgaccctactttccagaagaggaactctatgactccaaatccagggtaccagccc
agcatgaatacttccgacatgatgggtcgcatgtcctatgagccaaataaggatccatat
ggcagtatgagaaaaggtgatggaagtgatccctttatgtcctcagggcaagttcccaac
agtggtatgggagatccttataatcgtgctacaggtccagggatgagtaatatggctatg
ggaccgaggcaacattatccttacagccatttcgaaagagtgagaaccgaagcaggtatg
ggacctgaagccagcttgggaactggaacaccccagcccaacatcttgccttccactccg
gattcaggaatgtattctccaagccgctattctcaacaaccacagcaacggcatgattcc
tttagcaatcactttcctacacaaggtacatcctctggcagtccctttcctagccaacag
tccaccttatatcagccacagcagcagaactacaagagaacaatggatggcaactatggt
ccaccagccaaaagacacgaaggagagatatacaacgtaccatatagcacaggccaagga
caagcccagcaacagctccctccagcacaaacccaacaaacaagccagccacaaacagct
caaccttccccacagcaggaaatgtataaccagtacggtgggaatacatactctgctgca
gatcgccggcctgctgctgggcctcagaaccagttcccattccagtttggcagagagagg
gtctctgctccccctggttccagtacgcagcaaagcatgcctcctcagatgataggtggc
ccaatacagtccactccggaaggcccacaacagggcaccatatggcaagggcgtaatgat
atgggttacagctatccaaatcggcagagcactggctctgcgccccaagggtctgcctat
cacggagtgaatcgaaccgaagaaatgttacatccagatcagagggttaaccatgaggga
ccgtggccttctcatggcaaccgccagcctccttacggtccttctgcccccgtgccccca
atgacaaggccgccacagcctaactaccaggcccaacccagcatgcagaatcacattcct
caggtatctagtccagcacctcttcccaggccggtggaaaaccgcacctctccaagtaaa
tcttcattcctgcattcgggaatgaagatgcagaaggcagggcctcctgttccagcctcc
catgtaacaccagcagctgtccaacctcctatgatacgacgggacatcactttcccgcct
ggctcagtggaagctacacaaccagtgctgaagcagaggcggcgcctgaccatgaaagat
atcggaactcctgaagcatggagagtgatgatgtctctaaagtctgggttactggctgaa
agtacatgggccttagataccataaacatcctactctatgatgacaacagcataatgacc
ttcaacctcagccagctgccaggattgttggaactattggtggaatatttccgacgttgc
ctcattgaaatctttggaatcctgaaggaatatgaggtgggcgatccagggcaaagaact
ctgttggatcctgaaaggtgttgccaatcttcaaattctcctgaaggagtggagaaagaa
gagccgcagaattctaactgcgaggtggaggaagaggaggaagaaggggaggaagaggct
gcttttgcaaataaagtcacagcacctctagaaagtaacgaggagaagctagtcagtaaa
tttgacaaacttccagtcaagatagtgcagaagaacgatccattcgtggtagattattca
gataagcttggccgggtacaggaatttgagagtggactgctgcactggcggattggtggg
ggagacaccactgaacacatccagacccactttgaaagcaaattggagttatcgctgact
cataaacgagcttcctgcaactctgttttgagaaaacgctctgtagccgagggcaaccct
gtcactcgagagggagagtcctctgcacctgatggtcctccagagaagaggataacagct
actatggatgacatgctttcagtccgaccagggtccttggcagaagaagaggtggtcaaa
aatgtggaggtaacgaaggaaagcagcaaatttccatttggcattagtccagctcagagc
catagaaatatcaaaatattggaggacgaacctcacagtaaagacgaaacgcccctctgc
acgcttctggactggcaggactcgctgtctaaacgctgcatctgtgtatctaacatcatc
aggagtttatcgtttgtgccaggcaatgattttgagatgtcaaaacatcctggtctgctg
ttgatcctagggaaactgattctcttgcaccataagcacccagaacgcaaacaggcaccc
ctgacgtatgagaaggaagaggagcaggaccaaggagtgagctgcaacaaagtggagtgg
tggtgggactgcctggagatgctgcgtgaaaacactttggtcacgctggccaacatctct
ggccagttggacctttctccctatccagagagcatctgtttgcctatactggatggactt
ctccattgggccgtgtgtccttcagcagaagcccaagacccttttccaacccttgggcct
aatgctgtcctctcgcctcagagactggttttggaaaccctcagcaaactcagcatccag
gacaacaatgtggatttgatccttgcaacgccaccttttagtcgcttggagaaactctac
agcaccatggtgcgttttcttagtgaccgaaagaatcccgtatgtcgggagatggctgtg
gtactactggccaatttggcacagggtgacagcttggcagctagagccattgccgtgcag
aagggcagcattggcaatttgttgggctttttggaggatagcctggcagctactcagttc
cagcagagccaagcgagcttgatgcacatgcagaaccctccctttgagccgaccagtgtg
gacatgatgcgtcgggcagctcgtgcgttgctcgccctggccaaagtggacgagaaccac
tcggagttcacgttatacgaatcacggctgttggacatctccgtgtcacctctgatgaac
tcattggtttcacaagttatttgtgatgtactgtttttaattggccaatcatga
DBGET
integrated database retrieval system
