Protobothrops mucrosquamatus (Taiwan habu): 107290122
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Entry
107290122 CDS
T05763
Symbol
MSH6
Name
(RefSeq) DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
pmur
Protobothrops mucrosquamatus (Taiwan habu)
Pathway
pmur03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pmur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
107290122 (MSH6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmur03400
]
107290122 (MSH6)
DNA repair and recombination proteins [BR:
pmur03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
107290122 (MSH6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
MUM1-like_PWWP
DUF5339
Motif
Other DBs
NCBI-GeneID:
107290122
NCBI-ProteinID:
XP_015674460
LinkDB
All DBs
Position
Unknown
AA seq
1328 aa
AA seq
DB search
MSRQSSLLTFFSKPAEKNDDGGSGSPTSDAEGRPQVSTSASSSSQGRTPPLPADCDFSDF
SPGDLVWAKLEGYPWWPCLVYAHPTEGSLFRGRGRASRIHVQFFEDDPSRGWVSIRYIRP
YKGSTGRDTQRGGMFYSSRPEIKRAMELADVALRKDKSERLGLAICDKPSESEGEEEEEE
TEVSDEGDDFDTVKEIKSRNKRIARRKLSDGKAKKRKIFMDSDTDNEGSDMEFQPDEGSS
DENSVEIRDSETSESETGPEKKSSVKVLTKRSPKQMQEKACKSSQNNLSDTPSREICPDI
MYKLASYAAPESFDFRPSINGGGAGGGGGDGNPTVWEHEKIDWLHDGRRKDGHRRRQNDP
DYDPSTLFVPEDYLKNCTPGMRKWWELKSQNFDAVIFYKVGKFYELYHMDAVVGVNKLGL
VFMKGTWAHSGFPEMAFDRFANVLVQKGYKVVRIEQMETPEMMEARCKSLVHPTRFDRVV
RREICRIISKGTQTYSILDGDYSETHNKYLLCIKEKTDDSAGLHRTYGVCFVDTTVGKFY
VGQFLDDRHCSRFRTLLAHYTPVQILFEKGNPSAETQKILKGLISFTVQESLIPGSQFWN
ASKTLKTLIEESYFQNKENTNSGNTLPAVIRSMTAESDSLGLTPAENSELALSALGSCVF
YLKKCIIDKELLSMANFEEYIPVDVDIVNRTRSNSVFEKTNQRMVLDGVTLANLEILQNA
TRSSVEGTLLEKIDTCCTPFGRRLLKQWLCAPLCNPCAINDRLDAVEDLLAEAAKMSDIR
DRLKKLPDLERLLSKIHSIGSSLKNQNHPDNRAILYEEARYSKKKIIDFLSALEGFKVII
EILSILEDTVNGFKSKILKQIATVKSKNPAGCFPDLKAELEKWDSAFDHNIARRTGVVNP
KTGFDSDYDKALEDISEIEENLRQYLEVQRKRLGVRAVMYWGAGKNRYQMEIAETAVPRD
LPDEYIMKSSRKGYKRFWTKDIEKMLNDIISAEERRDAAQKDCMKRLFYDFDKTRKDWQT
AVECIAVLDVLLCLARYSQGCDGPLCRPEILLPENTPPFVELKSSRHPCITKIFFGDDFI
PNNIVIGLEDKKTNSRATCVLVTGPNMGGKSTLMRQAGLLVIMAQLGCFVPAESCRLTPV
DRVFTRLGASDRIMSGESTFFVELSETSSILQHATEHSLVLMDELGRGTATFDGTAIASA
VVKELSENIKCRTMFSTHYHSLVEDYSHSLSVQLGHMACMVENECEDPSQETITFLYKFV
NGACPKSYGFNAARLADIPEEVIQKGHKKAKEFEKAILSMKVFRNLCWIAEGALAARDYL
DKQTLLHV
NT seq
3987 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgccagagcagcctcctaacgtttttctcaaagcctgcggagaagaatgatgac
ggcggcagcggcagccccacaagcgacgccgagggccgtccccaggtttcgaccagtgcc
tctagtagcagccagggcaggacgccacctctgccggcggattgtgacttcagtgacttt
tcaccgggtgatttagtttgggccaaacttgaaggctacccatggtggccatgccttgtg
tatgcacacccaaccgaaggatccctttttagggggagaggaagagcatcgcgtatccat
gtacagttttttgaggatgatccttcaaggggctgggttagcattagatacataagacca
tataaaggttctacaggcagagacacccagaggggaggtatgttttacagttcaagacct
gaaattaaaagagcaatggaactggcagatgttgctttgagaaaggataaaagtgaacga
ctaggtctagctatatgtgacaaaccttcagaaagtgaaggagaagaagaggaagaagaa
acggaggtgagtgatgaaggcgatgatttcgacacagtaaaggaaataaaaagtagaaat
aaaagaatagctagacgaaagctttctgatggaaaagccaaaaagagaaagattttcatg
gattcagacacagataatgaaggttctgatatggaatttcagccagatgaaggtagcagt
gatgaaaatagtgttgaaatacgtgacagtgagacttctgaatctgaaactggccctgaa
aagaagagttccgttaaagtactgactaaacgttctcctaaacaaatgcaggaaaaggca
tgtaaatctagccaaaacaacctctctgacacacccagtagggaaatctgtcctgatatc
atgtataaattagcatcttatgcagctcctgaaagttttgattttcgaccaagcattaat
ggaggaggagccggagggggaggaggagatggtaatccaaccgtatgggagcatgaaaaa
atagattggcttcatgatggtagaaggaaggatggtcatagaagacgacaaaatgatcca
gattatgacccaagtactttatttgtgccagaggattatcttaaaaactgcactccagga
atgcggaaatggtgggagttgaaaagtcaaaattttgatgccgtgattttttataaagtt
ggaaaattttatgagttatatcatatggatgccgttgttggtgtaaataagcttggattg
gtatttatgaaaggcacttgggctcactcaggttttccagaaatggcatttgatagattc
gccaatgtcttagtccaaaaaggttataaagttgtacgaatcgagcagatggagactcct
gagatgatggaagcacggtgtaaatctttggttcacccaacaagatttgacagagttgtg
cgccgagaaatatgcaggataatttccaaaggcacacagacctacagtattcttgatggt
gactattcagagacccacaacaaataccttctttgcataaaagaaaaaacagatgattct
gctggcctacatcgtacttatggagtttgctttgttgatacaacagttggaaagttttat
gttggccagtttctggatgatcgtcattgttctaggtttagaacacttctggctcattat
actcctgtacagatactttttgagaaaggaaacccttctgcagaaacacaaaagatactt
aaaggtttaatctcttttactgttcaagaaagcttgattcctggttctcagttctggaat
gcatctaaaactttaaaaactctcattgaagaaagttattttcagaacaaagagaataca
aatagtggaaacactctgcccgcagtaatcagatctatgactgcagaaagtgattcactg
ggacttactcctgcagaaaacagtgaacttgctctctcagctctaggcagttgtgtattc
tatcttaaaaaatgtattattgacaaggaacttttatcaatggcaaattttgaagaatac
attcctgtggatgttgatatagttaacagaaccagatcaaatagtgtttttgagaaaaca
aaccagcgaatggtactcgatggggtaacactagcaaacctggaaatactacagaatgca
accaggagttcagtagagggcacattattggaaaaaattgacacttgttgtacacctttt
ggaagaagactcctgaagcaatggctctgtgcaccattatgtaatccttgtgctattaac
gatcgcctggatgcagttgaagacctcctagctgaggctgctaaaatgtctgatatccgt
gaccgtctcaaaaaactcccagatcttgaaaggcttttgagcaaaattcacagtattgga
tcttctcttaagaaccagaaccatccagacaatagggctattttatatgaggaggctagg
tacagtaagaaaaagattatagatttcttgtctgcactggaaggatttaaagtaataatt
gaaattctctcaattttggaagatactgttaatggttttaagtctaaaatactaaaacaa
atagcaacagtgaaatcaaaaaatccagcaggctgcttcccagacttgaaagcggaactt
gaaaaatgggattctgcctttgatcataatatcgcacggaggacaggtgtggttaatcca
aaaactggttttgattctgattatgataaagcattagaagatatcagtgaaattgaggaa
aatcttcgtcagtatttggaagtacaacgcaaaagacttggtgtcagagccgtgatgtat
tggggagcaggcaaaaaccgttaccaaatggagattgcagaaactgctgtgcctcgggat
ttgcctgatgaatatatcatgaagtctagtagaaagggctataaacgtttctggacaaaa
gacatagagaaaatgttaaatgatattatcagcgctgaagaacggagagatgcagcacaa
aaagattgtatgaaaagattattctatgacttcgataaaaccagaaaagattggcaaact
gcggtggaatgcatcgctgttctagatgttttgttatgccttgcacgctatagtcaggga
tgtgatggaccattgtgccgcccagaaatcttgttgccagaaaacaccccaccttttgtg
gagctcaaaagttcacgtcatccatgcattacaaaaatattctttggagacgatttcatt
cctaataatattgtaataggcttagaggataaaaaaacaaacagcagagctacttgtgtc
cttgtgactggtccaaacatgggaggaaaatctacgctcatgagacaggctggtctcttg
gtaataatggctcagttgggatgctttgtacctgctgaatcttgcaggcttactcctgtt
gatagagtgttcactagactaggagcttcagatagaattatgtcaggagagagtacgttc
tttgttgagcttagtgagacttcgagtatactgcaacatgcaacagagcattcccttgtt
cttatggatgagctagggagaggaacagcgacttttgatggaactgctattgctagtgcg
gttgtcaaagaactttcagagaatattaagtgtcgtacaatgttttcaacgcattatcat
tctttagtagaagattattctcacagtctctctgtacaattgggacacatggcttgtatg
gtagaaaatgagtgtgaagatcctagtcaagaaaccatcacattcctttataaatttgtt
aatggggcttgccctaaaagttacggatttaatgctgcaagacttgctgacattccagaa
gaagtgattcagaaaggtcacaaaaaggcaaaagagtttgaaaaagctattctttcaatg
aaagtatttaggaatctttgttggatagctgaaggagcattagcagccagagattatctt
gacaaacaaactctgcttcatgtttga
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