Protobothrops mucrosquamatus (Taiwan habu): 107290203
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Entry
107290203 CDS
T05763
Symbol
DICER1
Name
(RefSeq) endoribonuclease Dicer
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
pmur
Protobothrops mucrosquamatus (Taiwan habu)
Brite
KEGG Orthology (KO) [BR:
pmur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmur03036
]
107290203 (DICER1)
Chromosome and associated proteins [BR:
pmur03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
107290203 (DICER1)
microRNA pathway
RISC loading complex
107290203 (DICER1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dicer_platform
Dicer_dsRBD
Ribonuclease_3
Dicer_PBD
Ribonucleas_3_3
Dicer_dimer
PAZ
ResIII
DEAD
Helicase_C
Cas3-like_C_2
DSRM_2
SNF2-rel_dom
dsrm
Motif
Other DBs
NCBI-GeneID:
107290203
NCBI-ProteinID:
XP_015674552
LinkDB
All DBs
Position
Unknown
AA seq
1917 aa
AA seq
DB search
MKSSAFQPLNMAGLQLMTPASSPMGPFFGLPWQQEAIHDNIYTPRKYQVELLEAALDHNT
IVCLNTGSGKTFIAVLLIKELSYQIREDFKKKGKRTVFLVNSANQVAQQVSTVKTHSDLK
VGDYSSVEITEAWTKERWNQEFAKYQVLVMTCQMALNVLKNEHLALSNINLLIFDECHLA
IQDHPYREIMKLCESCPSCPRILGLTASILNGKCDPAELEEKIQKLEKILKSSAETATDL
VVLDRYTSQPCEIVVDCGPYSDKSGLYERLLTELDDALSFLNDCNISVHCRERDSILISK
QILSDCQAVLLVLGPWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCE
EHFSPASLDLKFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDE
DEEIEEKEKTETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFIT
GHGIGKNQPRSKQMEIEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLP
TEYRSYVQSKGRARAPISNYIMLADSDKIKCFEEDLKTYKAIEKILRNKCSKSVDISETE
NEPIIDDDDIFPPYVLRPEDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCKTRELLD
NTFYATLYLPINSPLRASIVGPPMSCARLAERVVALICCEKLHKIGELDDHLMPVGKETV
KYEEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLRDSYPKPDQPCYLYVIGMVLTTP
LPDELNFRRRKLYPPEDTTRCFGILTAKPIPQIPHFPVYTRSGEVTISIELKKSSFTLSL
QMLELITRLHQYIFSHILRLEKPALEFRPTDADSAYCVLPLNVVDGSSTLDIDFKFMENI
EKSEARTGIPSTQYTKETPFIFKLEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSKF
PSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKR
KAKWESLQNKQILVPELCAIHPIPASLWRKAVCLPSILYRLHCLLTAEELRSQTAIDAGV
GVKSLPIDFRYPNLDFGWKKSIDSKSFISASNSSLEENENYCKHSAIIVPENAAHQGAIK
TSSTDKHDQMSVNYRALIESPSKLQKDVSVELATTNGVSYNKKLANGNCDIPNRDVCQEN
QLNYCRQEIPVQSTTSYPKQNLYNNENQLKFSNECTLSNKYLDGNANRSTSDDCSKMAMT
TSASEGCKPSEESMDSVTSSSGGYSSKTLGPNPGLILQALTLSNASDGFNLERLEMLGDS
FLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNLYRLGKKKGLPSRMVVSIFDPPVNWL
PPGYIVNQDKSNADKWGKDEMTKEGLLSNGKHDYDDDDDDDLMWRVPKEETEFEDDFLEY
DQEHIKFIDNMLMGSGAFVKKISLSPFSPADSSYEWKAPKKSSLTNVQFSSDFDDFDYSS
WDAMCYLDPSKAVEEDDFVVGFWNPSEENCGIDAGKQSISYDLHTEQCIADKSIADCVEA
LLGCYLTSCGERAAQLFLCSLGLKVLPVIKKTEWDNVLCSYRDHFNNQQKHSSVNCISAT
LANQETSHYKDLVYGCLKIPPRCMFDHPDAETTLNHLISGFENFEKKINYSFKNKAYLLQ
AFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIF
ASLAVKYDYHKYFKAVSPELFHVIDDFVQFQMEKNEMQGMDSELRRSEEDEEKEEDIEVP
KAMGDIFESLAGAIYMDSEMSLEMVWQVYYPMMRPLIEKFSANVPRSPVRELLEMEPETA
KFSPAERTYDGKVRVTVEVVGKGKFKGVGRSYRIAKSAAARRALRSLKANQPQVPNS
NT seq
5754 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagctctgcttttcaacccctcaacatggcaggactacaactcatgaccccagct
tcctctccaatgggtcctttttttggactaccatggcaacaagaagcaattcatgataac
atttacacaccaagaaaatatcaggtggaactcctggaagcagctctggatcacaatact
attgtctgtttgaacactggctcagggaagacttttattgcagtactactcattaaagaa
ctctcttatcagatccgggaagacttcaaaaaaaaaggaaaaagaacagtatttttggtt
aattccgcaaaccaagttgctcagcaagtatcaactgttaagacacattcagatctcaaa
gtaggagactattcaagtgtggaaataacagaagcatggacaaaagaaagatggaaccag
gaatttgcaaagtatcaggttctggttatgacctgtcagatggctttgaatgttttaaaa
aatgaacatttagccctctcaaacattaatctccttatttttgatgagtgtcatcttgca
atccaggatcatccttatagagaaattatgaagctttgtgagagttgtccatcctgtcct
cgaatcttgggattaaccgcttccattttaaatggaaaatgtgatccggcagagttagag
gagaagattcaaaaattggagaaaattttaaagagcagtgctgaaacggcaactgattta
gtagttctggacagatatacttctcagccatgtgagattgtggtggattgcggaccatat
tctgacaaaagcgggctctatgaaagactgttaacagagctggatgatgcgcttagcttt
ctgaatgattgcaacatatctgtacattgtagagagagagattccatcttaatttctaag
cagatactgtcagactgtcaggcagtgttgcttgttctgggaccgtggtgtgcagataaa
gtagctgggatgatggtgagagagctacagaaatacattaagcatgagcaagaagagctg
cacaggaaatttttattgtttacagatactttcctaaggaaaattcatgcactctgtgaa
gagcacttctcacctgcctcacttgacctgaaatttgtaaccccaaaagtaataaaactg
cttgaaattttgcgcaaatataaaccctatgaacggcaacaatttgaaagtgttgaatgg
tataataataggaatcaagataattatgtatcttggagtgattctgaagatgatgatgag
gatgaagaaattgaagagaaagagaagacagagactaactttccttctccctttaccaat
attctgtgtggaattatttttgtggaacgaagatacactgcagttgtattaaacaggttg
ataaaagaagctggcaaacaagacccagagctggcttacatcagcagcaattttataact
ggacatggcattggaaagaatcagccccgtagcaaacagatggaaatagaattccgaaaa
caggaagaggtacttagaaaatttcgagcacatgaaaccaacttgctaattgcaactagt
attgtagaagagggtgttgacataccaaaatgcaatttggtggttcgttttgatttgccc
acagaatatcgttcctatgtgcaatccaaaggaagagccagggcaccaatctcaaactat
atcatgttagctgattcagacaaaattaaatgttttgaagaagatcttaaaacctacaaa
gcgattgagaagattctgaggaacaaatgctcaaagtctgttgatattagtgaaacagaa
aacgagcctattatagatgatgatgacatcttcccaccatatgtgttgaggccagaagat
ggtggtccaagagtcacaataaatactgctattgggcatattaatcggtattgtgctaga
ttaccaagtgatccatttactcatctggctcctaagtgtaaaactagagagcttcttgat
aacacattttatgcaacactttatctacctatcaattctcctcttcgagcatcaatagtc
ggtcctccaatgagttgtgcgagattagcagaaagagttgtcgctcttatttgttgtgaa
aaattgcataaaattggtgagctggatgatcacttgatgcctgttggaaaagaaacagta
aaatatgaggaggaacttgatttgcatgatgaagaagaaaccagtgttccaggaaggcca
ggttctacaaaacgaaggcagtgctaccctaaagctattccagaatgtttgagggacagt
tatcccaaacctgatcaaccctgttacctttatgtaattggtatggtcttaactactcct
ctacctgatgagctcaactttagaagacgaaagctatatcctcccgaagatactacaaga
tgttttggaatactgacagccaaacctatacctcagattcctcattttcctgtatatacc
cgctcaggagaagtgaccatatctattgagttaaagaaatcaagtttcactttgtcgtta
caaatgcttgagttaatcacacgacttcaccaatatatattctctcacattcttcgactt
gaaaaacctgcactagaattcagacccactgatgctgattcagcctattgtgttctacct
cttaatgttgttgatggctccagcactttggacattgattttaaatttatggaaaatatt
gagaaatcggaagctcgtactggcattcccagtacacaatatacaaaagaaacaccattc
atttttaaattagaggattatcaggatgcagttatcattccaaggtatcgaaattttgac
cagcctcatcgattctatgttgctgatgtgtacacagatcttacaccactgagcaaattt
ccttcaccagaatatgaaacatttgctgaatattataaaacaaagtacaaccttgacctg
accaatctcaaccagccattgctggatgtggaccacacatcttcaagacttaatcttttg
acgcctcggcatttgaatcagaaggggaaagctcttccattaagcagtgcagagaaacgg
aaagccaagtgggaaagtctgcaaaataagcagatcctagttcctgaactctgtgctata
catcctattccagcatcactgtggagaaaagcagtttgtctccctagcatcctttatcgt
cttcactgccttttgacagccgaggaactcagatctcaaacagctattgatgctggtgta
ggagttaagtcacttcctatagatttcagataccctaacctggactttggatggaaaaaa
tctattgacagcaaatccttcatctctgcttctaattcctctctagaagagaatgaaaat
tattgtaagcacagtgcaattatagtccctgaaaatgctgcacatcaaggtgctattaaa
acctcctccacagataagcatgaccaaatgtctgtgaactacagagcattgatagagtca
cctagcaaactccaaaaggatgtctcagtagaactggcaacaactaatggtgtttcttac
aataaaaaacttgccaatggcaattgtgacatacctaacagagacgtttgccaagaaaat
cagctaaattactgcaggcaagaaatacctgtacaatcaactacctcgtatcctaaacaa
aatttatataacaatgagaaccagctcaagttcagcaatgaatgtactctgagtaataaa
tatcttgatggaaatgctaacagatctacctcagatgattgttccaaaatggcaatgacc
accagtgcttcagaaggttgcaagccttcagaagaaagcatggattctgtaacaagctct
tccggtggttattcctcaaaaacccttggcccaaaccctggtctcattcttcaggcattg
actctttcaaatgctagtgatggatttaatctggaacggcttgaaatgcttggtgattca
tttttaaaacatgccatcactacatacttgttttgcacttaccctgatgctcatgaggga
cgcctgtcatatatgagaagcaaaaaagtcagcaattgtaacctgtatcgtcttggaaaa
aagaaagggcttcctagtcgcatggtagtgtctatatttgatcctcctgtgaattggctt
cctcctggttacatagtaaaccaagacaagagtaatgcagacaaatggggaaaagatgaa
atgacaaaagagggcttactgtctaatggaaaacacgattatgatgatgatgacgacgat
gatttaatgtggcgagtacccaaggaagaaactgagtttgaagatgactttttggaatat
gatcaggagcatatcaaatttattgacaatatgttaatgggttctggagcatttgtgaag
aaaatatcactgtctccattttcacctgctgatagcagttatgaatggaaagcacccaaa
aaatcatctttgactaatgttcaattttcatcagattttgatgattttgactatagttca
tgggatgcaatgtgctacttagatcctagcaaagctgttgaagaggatgattttgttgta
ggtttctggaatccatcagaagaaaactgtggtattgatgctggaaaacaatctatctca
tatgatttgcatacagagcagtgcattgctgacaaaagcattgcagactgtgtagaagcc
cttttgggatgttatctgaccagctgtggggaaagagctgcccagcttttcctgtgttca
ttgggtctgaaagtgcttccagttattaaaaaaactgagtgggacaatgttctttgctct
tacagagaccattttaataaccaacagaagcattcttcagtaaactgcatttctgccact
ttagctaatcaagaaacttctcactataaagacttggtatatggctgtttaaagattcct
ccaagatgtatgtttgatcatccagatgctgagacaaccttaaatcaccttatatcaggc
tttgaaaactttgagaaaaagattaactacagttttaagaacaaggcttatctacttcag
gcatttactcatgcctcgtatcattacaacaccattactgattgttaccagcggttagaa
tttctgggagatgcaattttggactacctcataactaagcacctttacgaagacccacga
cagcactcaccaggggtcctaacagacctgagatcagctctcgttaacaacaccattttt
gcctcactggctgtaaaatacgactaccacaaatatttcaaagctgtttctcctgagctg
tttcatgttattgatgattttgtacagttccaaatggaaaagaatgaaatgcaaggaatg
gattctgagctccgaagatctgaagaagatgaagaaaaagaagaagatatagaagtacca
aaggctatgggagatatatttgaatcccttgctggtgcaatttacatggatagtgaaatg
tctctggaaatggtttggcaagtgtactatccaatgatgaggccattaatagaaaaattc
tctgcaaatgtgccccgttcaccagtaagagagctgttggaaatggagccagagacagcc
aaatttagtcctgccgaaagaacttatgatggaaaggttagagtaacagtggaagttgta
ggaaagggaaaattcaaaggtgttggaagaagctatcggattgccaaatcagcagcagca
agaagagctctacgaagcctcaaagcaaatcaacctcaggttccgaatagctga
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integrated database retrieval system
