KEGG   Protobothrops mucrosquamatus (Taiwan habu): 107290209
Entry
107290209         CDS       T05763                                 
Name
(RefSeq) collagen alpha-1(XI) chain-like
  KO
K19721  collagen type V/XI/XXIV/XXVII, alpha
Organism
pmur  Protobothrops mucrosquamatus (Taiwan habu)
Pathway
pmur04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:pmur00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    107290209
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:pmur00536]
    107290209
Glycosaminoglycan binding proteins [BR:pmur00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   107290209
SSDB
Motif
Pfam: Collagen COLFI Laminin_G_2 Laminin_G_1
Other DBs
NCBI-GeneID: 107290209
NCBI-ProteinID: XP_029140538
LinkDB
Position
Unknown
AA seq 1721 aa
MAGSPAGLRGHLVCFLALLLRELPRARADGLVDVLQAFGVQEGKNGVTIAAGICTQRNGS
EETDLAFRLENQTHFITPTRQLFPDGHFPVDFSILATMKALKGSQSFLFSLYDERGVQQL
GVEIGRSPVFLYEDQLGFPVPEDYPHFHRVNLADGKWHRIALSVKGESVSLRIDCEDAIM
LPLKRSKQPVVSIDGVTLLGARRPDEDIFEGDLQQLLLVPDPAAAAQYCQDYMPDCDRQL
IYKLQTQDAEENIPQRKGKKGRGRGKGKGKGRKKGRGKKKRNKESLEKSSLIPASGENET
PTDTSPTKAATEFWEKVPDAEVGILTSTTMTANLNLTDNYQDLLGEEYLINENTELNASV
TYRAFDERLDNKDYEDYYDQRGASEAERYDPAEHIEATILFPEQPNLKGQKGEAAVIEPG
MIFEGPAGYRGPQGETGPMGSPGPPGFPGDPGEQGPPGHPGLPGADGLRGPPGTMLMLPF
QFRGDLLKGPSVSFQEAQAQAILQQAKLSMKGPPGPMGLTGRPGPLGLPGKSGQKGDSGD
AGPQGSPGIQGPIGPPGKIGKRGRSGADGGRGLPGETGSKGDRGFDGLPGLPGEKGNSGD
IGKPGLPGPPGNDGSKGSEGVQGPRGQPGEAGVRGLPGSRGNPGSHGQPGITGIDGAPGP
KGNMGIPGEPGPSGQQGNPGSHGLPGPQGPIGLPGEKGPPGKPGIPGLAGMDGPLGHPGR
EGPAGEKGVQGPSGAAGPVGYPGPRGVKGAFGIRGLKGSKGEKGEDGFPGFKGDMGPKGD
RGDAGQLGIRGEDGPEGLKGQVGPTGEAGHPGLSGEKGKLGVPGLPGYPGRQGPKGSTGF
PGPLGLIGEKGKRGKAGQAGQTGPRGPLGISGERGLPGSTGKPGSKGDSGHDGPPGTIGE
KGPTGPQGSNGFSGSKGPPGPVGKDGLPGHPGQRGEPGFHGKTGPPGPPGVVGPQGNTGE
TGPMGERGHPGSPGPPGEQGLPGIAGREGAKGDPGPSGIPGIPGPPGIRGFTGARGAVGE
KGPIGLKGAEGPPGPAGTIGPPGERGPSGAAGGIGLPGRGGNPGPPGPAGEKGAPGDRGP
MGPAGHDGILGPVGLPGPAGPPGLAGEDGDKGEMGGPGQKGSKGDKGDAGPPGPTGIQGP
IGHPGSAGPQGQRGGIGQPGAVGEKGEPGEAGDPGPSGDPGQQGVKGDVGEKGDSGQSGA
AGPPGKKGPPGEDGSKGNLGPIGFPGDPGPTGEPGPPGLDGISGEKGDVGDPGLPGPLGA
FGEPGPPGPPGKRGSFGPAGREGRQGEKGTKGEFGTEGPSGKMGPVGPQGPPGQSGSEGL
RGIPGAAGEPGLLGAPGQAGPPGPMGPAGLPGLKGDPGYKGEKGHAGLIGLIGPPGEMGE
KGDQGLPGNQGTSGTKGDPGNIGPQGPPGPPGSPGLSGHLGEKGNKGSLGPIGPKGDLGP
PGLPGPPGHPAELQNPIPMGSRRTSRQDWEIEEQRDAPGEGDIDPDADGLAEVLAALSSL
RDEVEQMRCPVGTLDSPARVCKELQFCHAHLKDGEYWIDPNQGCNRDAFKVYCNFTAGGE
TCLFPDKKFEAVRLAAWSKEQPGNWFSTFKRGKKFSYVDADGNPVLVTQLTFLRLLSAVA
RQNFTLFCQNMAAWYEADTHSHMKALHFRAFNDVELMHNSTDTPIHALYDGCQVRKGQER
TVLQIVTQHVEHLPLVDVAVQDFGDANQKFGFELGPVCFSG
NT seq 5166 nt   +upstreamnt  +downstreamnt
atggcgggcagccccgcgggactgcggggccacctggtctgcttcctggccctcctgttg
cgagaacttccccgggcgagggcagatggccttgtggatgtgctccaggcatttggtgtg
caggagggcaagaatggggtcaccatcgctgctgggatctgcactcagaggaatggatcg
gaggaaactgacttggccttccgcctggagaatcagactcatttcatcactcccacaagg
cagctctttcctgatggccacttcccagtggacttttcaatattagccacaatgaaagca
ctcaaaggcagccaatcttttctgttttccctgtatgatgaacgtggtgtacagcagctt
ggcgtagagattggacgttcccctgttttcctctatgaagaccagctgggttttccagtg
cccgaggactatcctcattttcacagagtcaacttggctgatggcaaatggcaccgcatt
gctctaagtgtgaaaggtgaaagtgtatctttgcgcattgactgtgaagatgctataatg
ttacccctgaagcgaagcaagcagccagttgtcagtattgatggggtcaccttgcttggg
gcacgtcgaccagatgaagacatttttgagggagatctccaacaattactgcttgtgcca
gacccagcagctgctgcccaatattgccaggattacatgcctgattgcgacagacaactc
atctacaaattgcagactcaggatgcagaagagaacattccacagaggaagggcaagaag
ggcagaggcagaggcaaaggaaagggcaagggcaggaagaaaggtagaggcaagaagaag
agaaacaaagagtccctcgagaagtcctcgctcattccagcctcaggcgagaatgagact
ccaactgatactagtccgacgaaggcagctactgagttctgggaaaaggttcctgatgca
gaggttggcatcctcacttctaccactatgacagccaacctcaaccttacagacaattac
caggaccttcttggagaagagtatttaatcaatgagaatacagaattgaatgccagtgtc
acttacagagcatttgacgagagacttgacaataaagattacgaggactactatgaccaa
cgaggggccagtgaagcagagcggtatgatccagctgagcacattgaagccaccatccta
tttcccgagcaaccaaatctgaagggacagaaaggggaggcagcggttattgaacctggt
atgatttttgaagggccagctggatatcgaggaccacagggagagacgggtcccatggga
tcaccagggccaccaggatttccaggagatcctggcgagcagggaccaccaggacatcca
ggtcttccaggagctgacgggctacgtggacctcctggaacaatgctcatgttgccattc
cagtttcgtggtgatttacttaaaggcccttcagtatctttccaggaggcccaggcccag
gctattttacagcaagccaagctttccatgaaagggcctcctggcccaatgggactcacg
ggaaggccaggaccactaggtctaccaggaaaatcaggacaaaaaggggattcgggtgac
gccggaccccagggttcccccgggatacagggaccaattggacccccagggaaaattggc
aagcggggtcgttcaggagctgatggtggcagaggactcccaggagaaacaggatccaag
ggtgaccggggctttgatggtctcccaggactccctggagaaaagggaaacagtggagat
atagggaagccaggcctacctggacctcctggaaatgacggttctaagggctctgaaggt
gtgcaagggcccagaggacagcctggggaagctggtgtacgtggtttgccaggctcgcga
ggtaatcctggttctcacggccagccgggtatcactggtattgatggtgctcctgggcct
aaaggcaacatgggcattccaggtgaaccaggcccatctgggcaacaaggaaaccctgga
tctcacggtttgcccggtcctcagggccccattgggcttccaggagaaaagggtccacca
ggaaaaccaggaataccaggactggctggaatggatggacctctggggcaccctggaaga
gaagggccagctggagagaaaggagttcagggtccatctggtgcagcagggccagttggt
tatccaggtccacgaggagtcaagggggcctttggaataaggggcctcaaaggcagcaaa
ggtgagaagggtgaagatggattccccggcttcaaaggtgatatggggcccaaaggtgat
cggggtgatgccggccaactgggcatacgtggtgaggatggccctgaggggctgaaagga
caggtgggacctactggggaagcaggtcatcctggcctgtctggtgagaagggcaaattg
ggggtgccagggctgccaggctatcctggccgccaaggacccaagggttcgaccggattc
ccagggcccctaggcctcattggagaaaaaggcaaacgaggaaaagctggccaggcagga
cagactggaccacgtggtcctctgggtatttctggtgaacgtggtttgccaggctctaca
gggaagccaggatcaaagggtgactctggccatgatggccccccagggactataggagaa
aaggggcccactgggccgcagggatccaatggattctccggatcaaagggaccaccaggt
cctgtaggaaaagatggtctaccaggacatccaggccagcgtggtgagccaggatttcat
ggcaaaactggcccaccagggccaccaggtgttgttgggccacagggaaacacaggagaa
actggccctatgggggagagaggccacccagggtcccctggtcctcctggagaacaaggc
ctgcctggtattgctggtagggaaggtgccaagggtgatcctggacctagtggcatccca
ggcattccaggtcctcctggaattagaggcttcacaggagcccgtggtgctgttggagag
aaaggaccaattgggctgaaaggagcagaagggccacctggtccagcaggcaccattggt
cctcctggggaacgaggtccctctggagcagccggaggcattggactaccgggaagaggg
ggtaatcccggaccacctggacctgcaggggagaaaggagcaccgggtgatcgaggacca
atgggtccagctggtcatgatggaatcctaggtccagtggggcttccaggcccagctggg
cctccaggacttgctggagaggacggtgacaaaggagaaatgggtggcccagggcagaag
ggaagcaagggcgacaaaggagatgcgggtcccccaggaccaactgggatccagggtcct
attgggcatccaggatctgctggcccacaaggtcagcgtggtgggataggccagcctggt
gctgttggtgaaaagggtgagccaggtgaagcaggggatcctggaccatcaggggaccca
ggccaacagggagtgaaaggtgatgttggtgaaaaaggagattctggccagtctggagca
gcagggccacctggaaaaaaaggccccccaggagaagatggatccaaagggaacctgggt
ccgataggattccctggtgacccgggcccaactggagagcctggtcctcctggcctagat
ggaatttctggtgagaaaggtgatgtgggtgatccaggacttccaggtccacttggagct
tttggggaaccaggtcctcctgggccaccagggaagaggggatcttttgggccagctgga
cgtgaaggtcgacagggtgagaaagggaccaagggtgaatttggtacagagggtccctca
gggaaaatgggaccggtgggcccacaaggacctccaggccaatctggttcagaaggtctg
cgtggaattcctggtgcagcaggtgaacctggtttattgggagctccaggacaggcaggg
cccccaggtcccatgggtcctgcagggctccctggtctcaaaggtgatcctggctacaag
ggagagaagggtcatgcaggactcattgggttgattggccctccaggtgagatgggtgaa
aaaggtgaccagggactgccagggaaccagggaacatcaggcactaagggtgaccctggc
aatattggacctcagggtcctccaggcccacctggatctcctggcctctcgggccatctg
ggagaaaaaggcaacaaaggctctttgggacctattggaccaaaaggtgatctaggacca
ccagggctaccaggaccaccaggccaccctgctgaactgcagaatccaatacccatggga
agtaggcgcacaagccgccaagactgggagatagaagaacagagagatgctccaggggag
ggggatattgatcctgatgctgatggactggcagaagtcttggcagccctgagctctcta
cgtgatgaggtggagcaaatgcgatgcccagtgggcactctggacagtccagcccgggtc
tgcaaggagcttcagttttgtcatgctcatctcaaagatggtgaatactggattgatcca
aaccagggatgcaaccgagatgccttcaaagtttattgcaacttcacagctggtggagaa
acctgcttattccctgacaagaaatttgaggctgtacgacttgccgcctggagcaaggag
caaccaggaaattggttcagcactttcaaaagaggcaaaaagttctcctatgtggatgca
gatggcaatcctgtgctggtcactcaactcacattcctacgcttgctgagtgccgttgcc
cggcagaacttcaccctcttctgccaaaatatggctgcttggtatgaagctgacacccac
agccacatgaaggcattgcattttcgggctttcaatgatgtggagttgatgcacaacagc
acagatactcccatccatgccttgtatgatggctgccaggttcgcaaaggtcaggagcgg
acagttctacaaatagtgacgcaacatgtggagcatctaccattggttgatgtggctgtt
caggattttggcgatgccaaccaaaagtttggctttgagctcggcccggtctgcttcagt
ggctga

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