Protobothrops mucrosquamatus (Taiwan habu): 107290795
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Entry
107290795 CDS
T05763
Symbol
PATL1
Name
(RefSeq) protein PAT1 homolog 1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
pmur
Protobothrops mucrosquamatus (Taiwan habu)
Pathway
pmur03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmur00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107290795 (PATL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmur03019
]
107290795 (PATL1)
Messenger RNA biogenesis [BR:
pmur03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107290795 (PATL1)
mRNA degradation factors
5'-3' decay
Decapping complex
107290795 (PATL1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
107290795
NCBI-ProteinID:
XP_015675203
LinkDB
All DBs
Position
Unknown
AA seq
659 aa
AA seq
DB search
MFRYQCFRIGRQGRFWFVGRKIYGLGNVEMRSNLVEVKSLEDCPLDGDEEAFHNLTEEDE
DIDQFNDDTFGAGAIDDDWREAHERLAELEEKPACSTEQVDHRVTDEMDLLGDHEENLAE
RLSKMVIDNELEDPAIMQAVQTRPQIQQPGGLNSSIWDGPSVLRRMRGPLLTQEVPSVSV
LEYALPQRPSQSREEEQDVSERALPRRSCSPVIGSPPVRAVPIGTPPKQPTMPNFNQQIL
CPKPVHIRVPIQQRYPSPFSDRMSPNQLCNVTNNSLLGHPFPPNVTPVLTHLQRAQLLGG
AQAGRMSPSQFARVSGLVGSPLAPMNPKLLQGRVGQMMPPAGGFRAFFGAPATPPSQHHS
PCPGAHLQNLRPRPQMFRPDTTHLHPQHRRLLHQRQQQSRNQHRNLNGSAGDRGSHRNNH
QEQIRKDPYANLMLQREKDWVSKIQMMQLQSTDPYLDDFYYQNYFQKLEKLSAAEEMHGD
GPKKERTKLITPQVAKLEHAYKPVQFEGSLGKLTVSSVNNPRKMIDAIVTLRGEEDETKE
KQVRDKRRQTLFTIEKTYSLLLDVEDYERRYLLSLEGDRLALMEERKQKICDMYDNLRGK
VPNQERLSDDAFVQIMCIRKGKHLVARILPFLSSEQAAEILMATARNLPFLIKKDAQDE
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgttccgctaccagtgcttcaggattggaaggcaagggaggttttggtttgtggggagg
aaaatctacggattgggaaatgtggagatgaggagtaatctcgtagaagtgaagtccctt
gaggactgccctttggatggagatgaagaagcttttcataatttgactgaggaagatgag
gatattgatcaattcaatgatgacacatttggagctggggcgattgacgatgactggcgg
gaagcacatgaaagattggctgagctggaagaaaagcctgcctgctcaacagagcaagtg
gatcacagggttaccgacgagatggacctgttgggtgatcatgaggaaaacctggcagag
aggcttagcaaaatggtgattgataatgaattggaagatccagccattatgcaggctgtg
cagactaggcctcagatacagcagccaggtggcctcaattcaagcatctgggatgggccc
tcagttttgaggcgcatgagaggaccactcctcactcaggaagtgccctccgtatcagtg
ctggaatatgccctaccacagaggccttcgcagtcccgagaagaggagcaagatgtctca
gagcgagcactacccaggcggtcatgctcccctgttatcggcagtcctcctgttagggct
gttcctattgggacgccccctaagcagcccaccatgcccaacttcaaccaacagatccta
tgtccaaagcctgtccacatcagagtcccaattcagcagcgttatccaagtcccttcagt
gacaggatgtctccgaaccagctctgcaatgtaacgaacaactccctcttaggccatccg
ttccctcctaatgttactcctgttctcacccacctccagagagcacagctactcggagga
gcacaggcagggaggatgtctcccagccagtttgcacgggtgtctggtcttgttggcagc
cctcttgcacccatgaatccaaaactgctccagggccgagtaggacagatgatgcctcca
gccggtggctttcgtgccttttttggggcaccggctacaccaccatcacaacaccactcc
ccatgtcctggagctcacttgcagaatctacgacctcggccacagatgttcaggccagat
acaacccaccttcatccacaacatcgacgactcttacaccagagacagcagcagagcagg
aatcaacacaggaatctaaatgggtcagctggggaccgagggagccaccgaaataaccat
caagagcagatcaggaaggacccttatgctaatcttatgctgcaacgggagaaggattgg
gtatccaagattcaaatgatgcaactgcaaagcactgatccctatttagatgacttctac
tatcagaactattttcagaaactagaaaaactgtctgcagctgaggagatgcatggtgat
ggtcctaaaaaggaacgcactaaactaatcaccccacaagtggcgaaactagagcatgcc
tataagccagtgcagtttgagggctcgctagggaagctgaccgtatccagtgtgaacaac
ccccgcaaaatgatagatgctattgtgactttaagaggagaggaagatgaaactaaggag
aagcaggttcgagataaaaggcgccagactctcttcactattgaaaaaacctatagcctc
ctcctggatgtagaagactatgagagacgctaccttttgagtttggaaggggacaggttg
gccttgatggaggagagaaagcagaaaatctgtgacatgtatgacaatctgaggggaaag
gtgcccaatcaagaaagacttagtgatgacgcttttgtgcagattatgtgtatacgtaaa
ggaaaacatctcgttgcacggatcctacctttcttgtccagtgaacaagcagctgagata
ctaatggcaacagccagaaatttgccctttctaatcaagaaagatgctcaagatgag
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