Protobothrops mucrosquamatus (Taiwan habu): 107290890
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Entry
107290890 CDS
T05763
Symbol
PAN2
Name
(RefSeq) PAN2-PAN3 deadenylation complex catalytic subunit PAN2
KO
K12571
PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:
3.1.13.4
]
Organism
pmur
Protobothrops mucrosquamatus (Taiwan habu)
Pathway
pmur03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmur00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107290890 (PAN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmur03019
]
107290890 (PAN2)
Enzymes [BR:
pmur01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
107290890 (PAN2)
Messenger RNA biogenesis [BR:
pmur03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107290890 (PAN2)
mRNA degradation factors
3'-5' decay
Pan complex
107290890 (PAN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAN2_N
UCH_1
RNase_T
UCH
WD40_like
PEP5_VPS11_N
WD40_CDC20-Fz
Motif
Other DBs
NCBI-GeneID:
107290890
NCBI-ProteinID:
XP_015675319
LinkDB
All DBs
Position
Unknown
AA seq
1192 aa
AA seq
DB search
MNFEGLDPALAEYVPSLHPALDPHLNPSLLQNMELDPEGVPLEGITVPDSVHIMEGMYSE
LHTVVSEVGVPVSFSHFDLHEEMLWVGNHGGHATSFFGPALERYSSFQVHSSDDIRQIQS
LENGVLFLTKNNLKYMSRGGLIIFDYLMDESEDMHSLLLTDPGTLLVGGLTSHVIEIDLN
TVQETQKYSVEIPGVTIMRQSNRFFFCGHTSGKVSLRDLRTFAVEHEFDAYSGSLSDFDV
HGNLLVTCGFSSRMNGLACDRFLKVYDLRMLRAITPLQVHIDPLFLKFIPTYTSRLAIIS
QTGQCQFCEPTGLANPADIFHVNTVGQLIMSFDVSSSKQAMVFGDSEGCVHLWADSPEIT
FNAYSRETDFALPCIVDTLPHLDWNQDLMPLSLIPVPLTTESLLSDWPAANSIPAPRRAP
PVDPDILRTMKKVGFIGYAPNPRTKLRNQIPYRLKELDHEFDNFSQVPESPIGREEEPRI
YMVAKKYRKVTIKYSKLGLEDFDFKHYNKTLFGGLEPHIPNAYCNCMIQVLYFLEPVRCL
VQNHLCQKEFCLSCELGFLFHMLDLSRGDPCQGSNFLRAFRTIPEAAALGLILADSDEAT
GKMNLGRLIQSWNRFILTQLHQETQEQEGPQAYRGIGSSNFGSSGDSVIGQLFSCEVENC
SMCRCGKETVRVSSTLLFTLSYPENNDKTMDYEFAQILKRSICLEQNTQAWCENCEKYQP
TVQTRNIRCLPDVLVINCEVNSFKEAEFWKMQAEYAFKKKMKKKGCLEFPKSREIAVGEW
NELGMAEGGHSYTSIEELKNIWIPYSIKMKLSKNKELEVYNWDESNELGMLEDQESTYVY
DLMATVVHILDSRTGGSLVGHIKVGETYHQRKEGVTHQQWYLFNDFLIEPVDKCEAVQFD
MSWKVPAILYYVRRNLHSKYNLHIKNPIEASVLLAEASLARKQRKCHATFIPLMLSEMPQ
VGDLVGLDAEFVTLNEEEAELRSDGTKSTIKPSQMSVARITCVRGQGPNEGVPFIDDYIS
TQEQVVDYLTQYSGIKPGDLDAKISSKHLTTLKSTYLKLRFLIDVGVKFVGHGLQKDFRV
INIMVPRDQVIDTVYLFHMPRKRMISLRFLAWYFLDLKIQGEMHDSIEDARTALQLYRKY
MELSTGGLEPEEFRKVLKGLYEKGRKMDWKVPEPDGQSSPKSAAVFSAVLSL
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atgaattttgaaggtcttgatccagcccttgcagagtacgttccttccctacatcctgcc
ctagatccccacctcaacccaagcctgttacagaatatggagctagatccagaaggagtc
cctctggaaggcatcactgtgcctgactcagtgcatatcatggagggcatgtattccgaa
ctccacaccgttgtttcagaagtgggtgtaccggtttctttctcccactttgatctacac
gaagaaatgctctgggttggaaaccatggaggtcatgccacttctttcttcggtccagcc
ctggaacgatattcctccttccaggtacacagcagtgatgacattcgacagatccagagc
ctggaaaatggtgtgctctttctgaccaaaaacaacctaaaatacatgtcaagaggtggg
ctcataatctttgattacctcatggatgaaagtgaggacatgcacagccttttactgact
gatcctggcactttgcttgttggaggcctaaccagccatgtgatcgaaatagacctcaac
acagtgcaggaaactcagaagtactcggtggaaattcctggagttacaattatgagacag
tcaaatcgtttcttcttttgtggtcacacatcaggaaaggtttccctgcgtgatctccgc
acttttgctgtagaacatgagtttgatgcctactcgggcagtttgtccgattttgacgtc
catggtaatctattggtgacatgtggcttctccagtcgaatgaacggcctggcttgtgat
cgtttcctcaaggtgtacgacttacgcatgttgcgagccattacacctctgcaggtccat
atcgatcctttgtttctgaagtttattcctacctacacatcccgcttggccatcatctct
cagacaggtcaatgtcagttctgtgaacctactggattagccaatcctgctgacatattt
cacgttaacacagtgggacagctaataatgagctttgatgtgtcatccagcaaacaagct
atggtttttggagactcagaaggctgtgtccacttatgggctgattcacctgagatcacc
ttcaatgcctactcccgggaaactgactttgccttaccttgtattgtggacaccttgccc
caccttgactggaaccaagatctcatgcccttgtcccttatacctgtacctctgaccacg
gagtcgttgctgtcggattggcctgcagccaattctatccctgcacccagacgagctcca
cctgttgatccagatatccttcggaccatgaagaaagttggcttcattggctatgctcca
aaccccaggaccaagctccggaatcagattccctaccgattaaaggagcttgaccacgaa
tttgataatttcagtcaagtccctgaatcccccattggaagagaagaggagccgcggatt
tacatggtggcaaagaaatacaggaaggtcacgataaaatattccaagctgggcctggaa
gattttgacttcaaacattacaataagactcttttcggtggtcttgaaccccacattcca
aatgcttactgcaattgcatgatacaggttctttatttcttagagcccgtgcgctgtttg
gtccagaatcatttatgccagaaggagttctgcctcagctgtgagctgggctttttattc
catatgctggatttgtccaggggagacccttgtcaggggagtaactttctgcgtgccttc
cgcaccatcccagaagcagctgctttgggattgatcttggctgattcagatgaagccaca
gggaagatgaacttaggtcggttgattcaaagttggaacagattcattctgacccagctc
caccaagagacgcaagagcaggaaggccctcaggcttaccgaggcattggcagcagcaac
tttggatcttccggggactcagtcattgggcagcttttcagctgtgaagtggagaattgc
agtatgtgccgctgtggcaaagagaccgtccgagtctcttctactctcctctttactctc
tcttatcctgaaaacaacgataaaacgatggattatgaatttgcccagatattaaaaaga
agcatttgtctggaacagaacactcaggcctggtgtgagaactgcgagaagtaccaaccc
acagtccagacacgcaacatccgctgtctgccagatgtgttagtcattaactgtgaagtc
aacagcttcaaggaagcagaattttggaagatgcaagctgagtatgcttttaagaagaag
atgaagaagaagggttgcctggaattccccaaaagtagagaaatagcagttggagaatgg
aatgagttaggaatggctgaagggggacactcctacacctccattgaagagctgaagaac
atctggattccttactccatcaagatgaagctctccaagaacaaggaattggaggtttac
aactgggatgaaagcaatgaattgggcatgttggaagatcaagaatctacatatgtctat
gacctcatggcaacagttgtacatattctggattcccggactgggggcagccttgtgggg
catatcaaagttggagagacctaccatcaaagaaaggagggtgtcacacaccagcagtgg
tatctttttaatgactttctcattgagcctgtggataagtgcgaggctgtacaatttgac
atgagctggaaagtgcctgctattctttattatgtgcggaggaacctccactccaagtac
aatttacacatcaagaacccgattgaagccagcgtgttgcttgctgaggcttcccttgct
cgcaaacagcgcaaatgtcacgccacgttcatccccctcatgctgagcgaaatgccacag
gttggagacttggtgggactggatgccgagtttgtcaccctcaatgaggaggaagctgag
cttcgcagtgacgggaccaaatccacgatcaaacccagtcagatgtcagtggccaggatc
acgtgtgtccgggggcagggtcccaatgagggcgttcctttcattgatgattacatttcc
acgcaagaacaggttgtggattatcttactcagtactcaggaataaagccgggagatttg
gatgccaaaatttcatccaaacatctcactacgctcaaatccacctatctaaagctacgc
ttccttatagatgtcggagtcaagtttgtgggccatggattgcaaaaagatttccgggtc
atcaatatcatggttcccagagatcaagtcatcgacacggtgtatttgttccacatgcct
aggaagaggatgatctctctgcgcttccttgcctggtatttcttggacctgaaaattcaa
ggagagatgcatgacagcattgaagatgcacgaacagcactccagctgtaccggaaatac
atggaactgagcactggaggcttggaacctgaggagttccggaaggtgctcaagggcctc
tacgaaaaagggagaaaaatggactggaaagtccctgaacctgatggccagagcagcccc
aagagtgcggcagtgttctcagctgtgttgtctctctga
DBGET
integrated database retrieval system
